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OK499991.1__UGO50654.1__SOPHRITA_63__00063
Bact-VirOK499991.1__UGO50654.1__SOPHRITA_63__00063
Identity
- Accession:
- OK499991 ↗
- Kingdom:
- phage
Quality
93.6
mean pLDDT
Taxonomy
TaxID: 2894790
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-71
Domain cluster:
rep: S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00147__D4-72
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1upsA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.66 | 55.0 | 4.52e-01 | 94.3% | 99.2% |
| 1afcA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.64 | 52.0 | 4.28e-01 | 90.0% | 100.0% |
| 3a07B00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.62 | 50.0 | 4.22e-01 | 88.6% | 96.6% |
| 2fdbN00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.60 | 48.0 | 3.89e-01 | 91.4% | 86.5% |
| 1a7gE00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 49.0 | 4.65e-01 | 94.3% | 100.0% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 50.0 | 4.35e-01 | 100.0% | 100.0% |
| 3oq2A00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 44.0 | 4.01e-01 | 94.3% | 79.8% |
| 5ixuA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 45.0 | 4.06e-01 | 100.0% | 98.0% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 46.0 | 4.12e-01 | 98.6% | 90.8% |
| 2oo3A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 40.0 | 2.79e-01 | 85.7% | 79.4% |
| 1m6uA00 | 2.60.40.1390 | Mainly Beta › Sandwich › Immunoglobulin-like › NDT80 DNA-binding domain | 0.52 | 47.0 | 3.17e-01 | 100.0% | 59.6% |
| 2bopA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 45.0 | 4.26e-01 | 97.1% | 100.0% |
| 1zpwX00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 45.0 | 4.32e-01 | 100.0% | 98.8% |
| 2nuhA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 3.96e-01 | 98.6% | 90.4% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 33.0 | 3.50e-01 | 95.7% | 78.0% |
| 4lbhA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.51 | 42.0 | 3.89e-01 | 94.3% | 100.0% |
| 2gwcA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.50 | 43.0 | 2.70e-01 | 100.0% | 35.8% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.50 | 41.0 | 3.77e-01 | 92.9% | 85.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2543587 | 375.1.1.48 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N | 0.61 | 31.0 | 4.08e-01 | 90.0% | 100.0% |
| 2507149 | 375.1.1.48 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N | 0.60 | 31.0 | 4.04e-01 | 90.0% | 100.0% |
| 3929205 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.59 | 42.0 | 4.02e-01 | 98.6% | 65.0% |
| 4933180 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 30.0 | 3.84e-01 | 91.4% | 100.0% |
| 5063434 | 375.1.1.48 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N | 0.56 | 31.0 | 3.65e-01 | 94.3% | 82.2% |
| 4556494 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.55 | 48.0 | 4.39e-01 | 100.0% | 79.6% |
| 3908673 | 11.1.1.652 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ribophorin_II_3rd | 0.54 | 42.0 | 3.44e-01 | 100.0% | 44.4% |
| 3942924 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.54 | 40.0 | 2.58e-01 | 80.0% | 80.8% |
| 3386915 | 304.110.1.1 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase | 0.54 | 46.0 | 4.12e-01 | 97.1% | 81.0% |
| 3970139 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.54 | 43.0 | 3.89e-01 | 92.9% | 95.2% |
| 5062185 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.53 | 47.0 | 4.34e-01 | 100.0% | 95.6% |
| 3716530 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.53 | 43.0 | 4.04e-01 | 88.6% | 100.0% |
| 5007807 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.53 | 44.0 | 4.08e-01 | 97.1% | 95.8% |
| 4514234 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.52 | 45.0 | 4.19e-01 | 100.0% | 81.1% |
| 4414821 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.51 | 43.0 | 4.02e-01 | 98.6% | 81.9% |
| 4316258 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.51 | 42.0 | 3.97e-01 | 92.9% | 85.9% |
| 3843059 | 304.9.1.86 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF26088 | 0.51 | 41.0 | 3.82e-01 | 92.9% | 84.2% |
| 4011441 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.51 | 40.0 | 2.55e-01 | 88.6% | 76.4% |
| 4260605 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.51 | 44.0 | 4.06e-01 | 100.0% | 79.6% |
| 4178430 | 223.3.1.8 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 | 0.51 | 37.0 | 2.95e-01 | 78.6% | 61.9% |
| 4479924 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.51 | 42.0 | 3.89e-01 | 92.9% | 88.2% |
| None | — | 0.51 | 40.0 | 2.52e-01 | 88.6% | 78.9% | |
| 4933397 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.51 | 44.0 | 4.24e-01 | 100.0% | 100.0% |
| 4567570 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.51 | 43.0 | 4.12e-01 | 100.0% | 88.2% |
| 4108216 | 304.110.1.1 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase | 0.50 | 41.0 | 3.90e-01 | 97.1% | 91.1% |