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OK499992.1__UGO50937.1__NATE_84__00084

Bact-Vir

OK499992.1__UGO50937.1__NATE_84__00084

Identity

Accession:
OK499992 ↗
Kingdom:
phage

Quality

95.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-54
PDB
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d0nA05 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.71 46.0 3.77e-01 100.0% 36.5%
3ir9A02 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.68 55.0 4.19e-01 100.0% 39.2%
1uc6A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 50.0 3.97e-01 100.0% 40.4%
1zvfB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 47.0 3.36e-01 100.0% 25.0%
2xc8A00 2.60.40.2980 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 51.0 3.90e-01 100.0% 37.2%
1tdqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 53.0 4.47e-01 100.0% 53.3%
5utkA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 49.0 4.23e-01 100.0% 53.0%
2edyA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 48.0 3.87e-01 100.0% 41.7%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 46.0 3.66e-01 100.0% 36.4%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.63 50.0 4.69e-01 100.0% 71.2%
4eq3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 51.0 4.05e-01 100.0% 44.4%
4gs7C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 47.0 3.88e-01 100.0% 44.9%
2gfoA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 54.0 3.30e-01 100.0% 21.8%
4nn5C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 46.0 3.79e-01 100.0% 43.4%
5lvxC02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 52.0 4.23e-01 100.0% 99.1%
1ejeA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 53.0 3.65e-01 100.0% 29.7%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 46.0 3.93e-01 100.0% 50.0%
2h41A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 3.87e-01 100.0% 48.4%
2v5yA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 43.0 3.70e-01 100.0% 45.3%
4r8tB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 49.0 4.49e-01 100.0% 68.5%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 51.0 3.75e-01 100.0% 36.4%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 51.0 3.45e-01 100.0% 27.5%
2ee3A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 45.0 3.65e-01 100.0% 41.7%
4ecnA01 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.59 52.0 4.17e-01 100.0% 50.5%
2n1kA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 45.0 3.65e-01 100.0% 42.5%
3r8qA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 46.0 3.91e-01 100.0% 51.1%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 51.0 4.00e-01 100.0% 50.9%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 50.0 3.15e-01 100.0% 25.3%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 49.0 3.97e-01 100.0% 48.1%
2iabA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 49.0 3.68e-01 100.0% 37.8%
5z0uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 49.0 3.75e-01 100.0% 41.9%
3h96C00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 49.0 3.68e-01 100.0% 44.9%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 44.0 3.49e-01 83.0% 84.8%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 47.0 3.86e-01 100.0% 48.6%
8bs9A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 49.0 3.07e-01 100.0% 24.3%
3hrzC01 2.20.210.20 Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › 0.56 44.0 4.54e-01 100.0% 93.9%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.56 49.0 3.47e-01 100.0% 46.1%
3ihpA03 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 48.0 2.97e-01 100.0% 30.4%
3gzkA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 40.0 3.56e-01 77.4% 87.3%
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.56 48.0 3.38e-01 100.0% 75.6%
1ltlA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.56 47.0 4.85e-01 100.0% 100.0%
3i3tA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 48.0 3.02e-01 100.0% 23.8%
4pofA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.56 47.0 4.81e-01 100.0% 100.0%
6grrB01 3.30.457.10 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain 0.55 37.0 3.33e-01 71.7% 88.6%
4rdbA01 2.60.40.2580 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 47.0 3.47e-01 100.0% 38.3%
2mamA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 47.0 3.71e-01 100.0% 44.9%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.55 46.0 3.31e-01 100.0% 39.9%
1uijB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 36.0 2.69e-01 100.0% 23.0%
7r3eB02 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.54 41.0 2.96e-01 84.9% 28.2%
4ksnA00 6.20.250.80 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.53 47.0 4.40e-01 100.0% 84.6%
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.53 44.0 3.34e-01 98.1% 37.7%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.52 43.0 3.75e-01 100.0% 72.2%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.52 41.0 3.62e-01 100.0% 56.5%
5kycB02 2.20.210.10 Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › ubp-family deubiquitinating enzyme superfamily 0.52 43.0 4.38e-01 100.0% 96.2%
6cc0A01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.51 39.0 2.81e-01 84.9% 28.0%
2qjvA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 44.0 3.25e-01 100.0% 42.0%
2b39A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.47e-01 100.0% 57.8%
3widA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.51 39.0 2.90e-01 94.3% 98.9%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 3.15e-01 100.0% 60.3%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3255604 224.1.1.2 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.72 47.0 3.59e-01 100.0% 28.8%
5058198 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.69 48.0 3.64e-01 100.0% 31.2%
3408923 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.69 48.0 3.41e-01 100.0% 23.8%
5070290 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.66 49.0 3.70e-01 100.0% 33.6%
5049794 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.65 59.0 4.20e-01 100.0% 36.6%
5027350 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.65 55.0 4.03e-01 100.0% 36.2%
4983067 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.63 52.0 5.31e-01 100.0% 96.0%
3626222 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 46.0 3.69e-01 100.0% 39.1%
3236126 10.10.1.1 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.61 55.0 4.13e-01 100.0% 72.0%
3584885 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.60 47.0 4.54e-01 100.0% 75.0%
3474250 3369.1.1.0 beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 0.60 54.0 3.65e-01 100.0% 76.8%
4015385 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.59 51.0 3.50e-01 100.0% 32.3%
5034832 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 52.0 4.74e-01 100.0% 90.0%
3508717 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 51.0 4.69e-01 100.0% 75.7%
3364575 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.59 52.0 3.64e-01 100.0% 34.1%
3268665 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 51.0 3.94e-01 100.0% 46.7%
3924473 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 43.0 3.06e-01 100.0% 23.7%
4982354 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.58 50.0 4.70e-01 100.0% 87.7%
3906109 4135.1.1.0 beta duplicates or obligate multimers › MAL13P1.257-like › MAL13P1.257-like › MAL13P1.257-like 0.58 50.0 3.72e-01 100.0% 50.0%
3392943 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.57 50.0 3.68e-01 100.0% 37.2%
4028467 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.57 49.0 3.18e-01 100.0% 21.1%
5002890 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.57 50.0 4.01e-01 100.0% 57.1%
5080798 4.17.1.0 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like 0.57 49.0 4.43e-01 100.0% 84.0%
3593239 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 49.0 3.65e-01 100.0% 40.0%
4995694 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 44.0 4.46e-01 98.1% 96.4%
4943623 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 49.0 4.04e-01 100.0% 67.0%
3238303 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 41.0 3.30e-01 79.2% 91.8%
3953219 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 3.72e-01 100.0% 44.0%
4517008 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.56 46.0 4.07e-01 100.0% 61.3%
4994895 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.56 48.0 4.28e-01 100.0% 78.8%
4642857 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 48.0 4.30e-01 100.0% 82.5%
3251948 375.1.3.2 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › MRNIP 0.56 43.0 4.21e-01 100.0% 76.7%
3927698 11.1.1.905 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ILCR1 0.56 48.0 3.50e-01 100.0% 34.8%
3276640 11.1.1.801 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.56 48.0 3.50e-01 100.0% 41.9%
4000532 2.1.1.81 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 0.56 41.0 3.58e-01 81.1% 55.3%
5073888 4.1.2.2 beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.56 50.0 4.37e-01 100.0% 70.0%
5045214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 46.0 4.31e-01 100.0% 75.7%
3411714 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 44.0 4.10e-01 100.0% 70.0%
5049003 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 3.32e-01 100.0% 33.3%
3978662 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.55 41.0 3.52e-01 100.0% 46.3%
4947623 268.1.1.0 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.55 48.0 3.93e-01 100.0% 76.0%
3599827 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 3.40e-01 100.0% 37.7%
3743128 4135.1.1.0 beta duplicates or obligate multimers › MAL13P1.257-like › MAL13P1.257-like › MAL13P1.257-like 0.55 47.0 3.56e-01 100.0% 64.4%
3587931 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.55 41.0 3.01e-01 100.0% 29.3%
4949773 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.54 47.0 3.47e-01 100.0% 36.6%
3257739 11.1.1.801 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.54 47.0 3.47e-01 100.0% 41.4%
4969566 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.54 48.0 4.17e-01 100.0% 67.5%
3717220 221.1.1.99 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UCH 0.54 45.0 2.65e-01 100.0% 14.3%
3919667 269.1.1.3 a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › COLFI 0.54 45.0 3.10e-01 100.0% 47.6%
3184022 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.54 45.0 3.50e-01 100.0% 61.5%
4999705 4.1.2.2 beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.53 47.0 3.89e-01 100.0% 58.9%
4139778 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.53 45.0 4.12e-01 100.0% 71.2%
3597115 11.10.1.5 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.53 45.0 3.59e-01 100.0% 53.0%
3900933 11.1.1.54 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 0.53 45.0 3.43e-01 100.0% 43.6%
5033505 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 3.66e-01 100.0% 54.5%
3622522 11.1.1.54 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 0.53 45.0 3.52e-01 100.0% 46.4%
3235407 11.2.1.52 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem 0.52 42.0 3.23e-01 100.0% 100.0%
4028150 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.52 45.0 3.61e-01 100.0% 48.2%
4111224 223.1.1.3 a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.52 38.0 2.86e-01 83.0% 72.1%
3591571 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 43.0 2.55e-01 100.0% 14.5%
4175825 387.1.1.0 few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related 0.51 43.0 4.10e-01 100.0% 80.0%