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OK499992.1__UGO50945.1__NATE_92__00092

Bact-Vir

OK499992.1__UGO50945.1__NATE_92__00092

Identity

Accession:
OK499992 ↗
Kingdom:
phage

Quality

87.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-76
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qnyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.77 58.0 4.80e-01 80.0% 79.8%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 51.0 5.31e-01 80.0% 84.1%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.70 56.0 4.55e-01 85.7% 79.8%
6ya6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.70 53.0 4.72e-01 81.4% 93.9%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 45.0 4.36e-01 78.6% 58.7%
5ih0A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 51.0 4.69e-01 80.0% 94.6%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 49.0 4.41e-01 77.1% 89.1%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.65 45.0 4.50e-01 71.4% 73.2%
6zxfz01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.65 46.0 3.82e-01 77.1% 42.3%
5ighA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 48.0 4.48e-01 80.0% 95.5%
4jrnA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 55.0 4.40e-01 95.7% 91.5%
2w1zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 54.0 4.32e-01 94.3% 92.9%
4o38A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 45.0 4.01e-01 74.3% 88.5%
5jzjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 48.0 4.33e-01 81.4% 90.4%
3lltA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 50.0 4.49e-01 84.3% 90.3%
3ayjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 43.0 2.74e-01 72.9% 72.8%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.62 46.0 3.39e-01 92.9% 31.1%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 43.0 3.48e-01 75.7% 76.4%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 43.0 3.34e-01 75.7% 86.3%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.60 45.0 4.52e-01 81.4% 88.6%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 43.0 3.83e-01 80.0% 87.2%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 40.0 3.54e-01 74.3% 46.8%
3u04A00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.58 45.0 3.40e-01 84.3% 72.1%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 45.0 3.81e-01 87.1% 94.4%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 40.0 4.03e-01 77.1% 73.2%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 40.0 4.02e-01 77.1% 72.2%
3fcyA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 44.0 2.91e-01 85.7% 42.9%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.57 43.0 3.27e-01 82.9% 33.5%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 45.0 3.81e-01 88.6% 97.5%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 45.0 4.64e-01 91.4% 95.5%
1n02A00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.56 46.0 4.11e-01 91.4% 85.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 38.0 3.97e-01 70.0% 80.6%
2r6uA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 37.0 3.13e-01 72.9% 38.5%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 40.0 3.80e-01 78.6% 82.6%
1l7aA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 44.0 2.87e-01 87.1% 41.5%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 42.0 4.42e-01 91.4% 93.8%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 42.0 4.32e-01 90.0% 92.2%
4dsdA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.54 44.0 3.76e-01 97.1% 88.9%
2rk0A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 34.0 2.90e-01 70.0% 36.4%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.53 42.0 3.77e-01 91.4% 81.5%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 38.0 3.41e-01 77.1% 76.5%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.53 43.0 3.59e-01 95.7% 81.8%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.53 38.0 3.40e-01 78.6% 84.6%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.52 46.0 2.82e-01 100.0% 56.4%
1kllA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 35.0 2.85e-01 77.1% 37.5%
2xg5A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.71e-01 87.1% 81.5%
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.51 41.0 3.26e-01 97.1% 91.5%
3q48A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.53e-01 78.6% 81.9%
3oxhA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 33.0 2.69e-01 70.0% 32.8%
3fcdB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 30.0 2.59e-01 70.0% 32.8%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.50 41.0 2.85e-01 98.6% 25.3%
8hbfB01 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.50 39.0 2.93e-01 85.7% 35.9%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5060335 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.84 52.0 3.30e-01 72.9% 14.7%
3698586 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.73 57.0 3.49e-01 82.9% 25.5%
3626043 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.71 50.0 3.22e-01 72.9% 20.3%
3596095 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.69 53.0 3.33e-01 81.4% 24.8%
3438797 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.68 48.0 2.97e-01 72.9% 28.2%
3578208 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 47.0 5.09e-01 85.7% 90.9%
3540753 206.1.1.71 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo 0.68 46.0 3.01e-01 71.4% 27.9%
3619978 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.68 48.0 3.02e-01 74.3% 23.8%
3927695 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.67 49.0 3.15e-01 77.1% 25.4%
3191606 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.67 56.0 3.59e-01 92.9% 27.9%
5055905 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 48.0 4.13e-01 81.4% 47.8%
3786361 206.1.1.14 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 0.65 51.0 3.06e-01 85.7% 12.1%
5014399 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.65 47.0 3.23e-01 77.1% 23.0%
None 0.64 45.0 3.18e-01 74.3% 32.9%
3177693 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.64 50.0 3.09e-01 82.9% 25.0%
3923792 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.64 49.0 3.18e-01 81.4% 31.0%
3551813 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.63 55.0 3.45e-01 95.7% 26.2%
3883849 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.63 45.0 2.96e-01 75.7% 28.6%
3662506 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.63 45.0 3.04e-01 74.3% 21.6%
3176674 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.63 47.0 2.93e-01 80.0% 33.5%
3741680 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 42.0 4.59e-01 72.9% 89.1%
3931872 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.62 47.0 3.02e-01 81.4% 34.2%
3975862 220.1.1.104 beta barrels › PH domain-like › PH domain-like › PH domain-like › Cpta_toxin 0.61 42.0 4.09e-01 72.9% 86.3%
4383895 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.61 48.0 3.12e-01 84.3% 32.3%
3217772 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 43.0 4.05e-01 87.1% 61.2%
3600988 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.61 47.0 2.94e-01 82.9% 22.9%
3740304 2003.1.5.111 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Rsm22 0.60 52.0 3.30e-01 100.0% 46.1%
4271974 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.59 42.0 4.41e-01 75.7% 82.8%
4878518 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.59 41.0 3.34e-01 75.7% 91.8%
4605602 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 41.0 4.22e-01 77.1% 78.5%
3929340 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.59 46.0 3.73e-01 88.6% 91.0%
3591224 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 38.0 4.27e-01 77.1% 96.0%
3189510 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 42.0 4.43e-01 87.1% 96.7%
4557124 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.56 41.0 4.18e-01 88.6% 80.0%
3640581 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.55 44.0 2.71e-01 91.4% 24.4%
3733732 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 47.0 3.25e-01 95.7% 28.2%
4370667 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.55 40.0 2.68e-01 81.4% 25.2%
3725498 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 39.0 3.95e-01 82.9% 78.6%
3639196 3256.1.1.0 a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.54 37.0 4.20e-01 72.9% 100.0%
3624726 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 44.0 2.85e-01 90.0% 65.8%
3208232 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 41.0 2.55e-01 85.7% 22.3%
4087213 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.53 41.0 4.06e-01 85.7% 82.7%
3480200 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.53 42.0 4.20e-01 90.0% 97.3%
3184801 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.53 45.0 2.89e-01 100.0% 28.3%
4278807 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.53 39.0 3.36e-01 78.6% 51.8%
4489443 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.53 38.0 3.28e-01 75.7% 53.6%
3201636 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.53 44.0 2.86e-01 100.0% 29.5%
3640527 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.53 38.0 2.85e-01 81.4% 46.5%
4049598 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.53 35.0 3.17e-01 70.0% 55.0%
3276021 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.52 45.0 2.70e-01 98.6% 39.8%
4031599 101.1.2.584 alpha arrays › HTH › HTH › winged helix domain › HrcA 0.52 36.0 3.31e-01 72.9% 55.8%
4431372 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 35.0 3.23e-01 71.4% 61.1%
4134592 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.51 36.0 3.20e-01 72.9% 61.0%
4353121 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.51 37.0 3.37e-01 78.6% 60.0%
4622237 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.50 34.0 3.14e-01 71.4% 61.1%
3945586 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.50 42.0 2.84e-01 97.1% 49.8%
4058734 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.50 34.0 3.12e-01 71.4% 62.1%
D2 high residues 81-124
PDB
Domain cluster: representative