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OK500002.1__UGO51715.1__ATHENA_37__00037

Bact-Vir

OK500002.1__UGO51715.1__ATHENA_37__00037

Identity

Accession:
OK500002 ↗
Kingdom:
phage

Quality

95.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 21-73
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.81 58.0 3.86e-01 79.2% 20.6%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.71 56.0 3.95e-01 90.6% 61.8%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.69 54.0 3.93e-01 84.9% 58.5%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 50.0 5.26e-01 84.9% 97.7%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.64 49.0 4.62e-01 88.7% 67.6%
8f2lE01 1.10.1740.110 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.64 46.0 3.76e-01 77.4% 97.0%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.63 45.0 4.83e-01 79.2% 100.0%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.61 42.0 4.54e-01 75.5% 92.7%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.61 44.0 4.66e-01 81.1% 89.1%
7u32G01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.61 42.0 4.15e-01 81.1% 67.9%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 3.84e-01 86.8% 61.1%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 39.0 3.48e-01 73.6% 45.1%
4mtdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 3.73e-01 84.9% 56.8%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 38.0 3.64e-01 73.6% 56.1%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.57 41.0 3.73e-01 79.2% 58.1%
2yn7A00 1.10.3160.10 Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 0.57 42.0 2.86e-01 81.1% 22.9%
2wgmA01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.56 44.0 3.78e-01 84.9% 70.7%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 43.0 3.66e-01 92.5% 58.6%
5cofA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.52 44.0 3.14e-01 98.1% 58.1%
2x2vA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.51 37.0 3.56e-01 83.0% 69.1%
1v9mA02 1.20.1690.10 Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain 0.51 37.0 3.14e-01 83.0% 46.5%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3590293 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 82.0 8.10e-01 98.1% 92.7%
4608916 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 61.0 6.09e-01 88.7% 76.4%
3385608 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 60.0 5.73e-01 83.0% 68.3%
4959580 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.80 57.0 5.89e-01 81.1% 80.0%
3969534 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.80 58.0 5.77e-01 81.1% 74.5%
4510105 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 56.0 6.20e-01 79.2% 100.0%
3589854 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 58.0 5.40e-01 83.0% 64.6%
4981564 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 61.0 6.03e-01 88.7% 81.8%
3989290 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 65.0 6.66e-01 98.1% 98.0%
3837930 101.1.1.347 alpha arrays › HTH › HTH › Three-helical HTH › Phage_integrase 0.77 59.0 5.88e-01 88.7% 80.0%
3392384 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 59.0 5.21e-01 86.8% 60.0%
3509159 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.75 53.0 5.14e-01 81.1% 66.7%
3786618 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.74 59.0 4.45e-01 90.6% 37.1%
3587017 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.74 55.0 5.89e-01 84.9% 95.6%
3956306 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.74 61.0 6.04e-01 94.3% 87.3%
3280314 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.73 57.0 5.70e-01 88.7% 83.6%
3602804 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.73 54.0 5.57e-01 86.8% 86.0%
3971665 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 59.0 5.23e-01 88.7% 70.7%
3892817 101.1.1.129 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 0.72 56.0 4.68e-01 86.8% 50.0%
3887530 101.1.10.41 alpha arrays › HTH › HTH › Cyclin-like › HTH_Tnp_4 0.72 56.0 4.67e-01 86.8% 50.0%
3197445 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 55.0 5.47e-01 92.5% 81.8%
3883738 101.1.3.20 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_4 0.72 55.0 4.66e-01 86.8% 50.0%
3625029 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 59.0 4.80e-01 98.1% 47.6%
3793383 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.72 56.0 5.33e-01 94.3% 72.3%
3886097 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 55.0 4.95e-01 86.8% 60.0%
4558962 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.71 60.0 5.92e-01 94.3% 89.1%
4990518 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 50.0 4.75e-01 75.5% 61.5%
4626289 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.71 54.0 5.13e-01 88.7% 69.2%
3984810 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 53.0 5.31e-01 86.8% 80.0%
3232498 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 55.0 5.01e-01 84.9% 64.3%
3969325 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.70 55.0 5.00e-01 86.8% 64.3%
4533441 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.70 54.0 4.47e-01 86.8% 47.4%
3620216 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 54.0 4.69e-01 92.5% 54.1%
3455559 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 53.0 4.43e-01 86.8% 47.4%
3971636 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.69 48.0 5.15e-01 79.2% 97.5%
3448782 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.69 53.0 4.32e-01 84.9% 45.0%
3343807 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 52.0 4.54e-01 86.8% 52.9%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.68 54.0 5.37e-01 94.3% 87.3%
3283500 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.68 50.0 5.14e-01 81.1% 86.0%
4863786 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.68 52.0 5.18e-01 84.9% 81.8%
5057202 101.1.3.8 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.68 53.0 4.97e-01 94.3% 68.6%
3284292 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.68 52.0 4.42e-01 84.9% 50.0%
4591310 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.68 51.0 4.72e-01 83.0% 70.0%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.68 52.0 4.25e-01 86.8% 43.8%
3834548 101.1.3.12 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.67 55.0 5.20e-01 92.5% 75.4%
4978129 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.67 54.0 3.25e-01 94.3% 16.8%
4280807 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.66 51.0 5.07e-01 86.8% 87.3%
3800176 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 54.0 4.73e-01 98.1% 63.5%
3587739 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.65 49.0 4.63e-01 86.8% 70.0%
3191582 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.65 52.0 3.99e-01 92.5% 37.7%
3264680 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 50.0 4.41e-01 86.8% 66.3%
3783338 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 46.0 4.81e-01 81.1% 93.3%
4934485 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.64 48.0 4.39e-01 84.9% 60.8%
4874560 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.63 45.0 4.63e-01 81.1% 80.4%
3452676 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.63 50.0 4.31e-01 96.2% 55.8%
4919061 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.61 44.0 4.71e-01 81.1% 93.2%
4971829 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.61 44.0 4.15e-01 86.8% 61.4%
3483536 5059.1.1.0 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter 0.59 48.0 3.82e-01 96.2% 81.7%
3965368 101.1.4.20 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.58 41.0 3.67e-01 75.5% 51.2%
4961508 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.58 42.0 3.79e-01 79.2% 58.7%
3590374 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.57 42.0 4.18e-01 81.1% 81.8%
2670618 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.54 42.0 4.17e-01 88.7% 96.5%
4055973 192.8.1.250 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CENP-R 0.52 39.0 3.41e-01 83.0% 58.8%
3709920 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 44.0 2.86e-01 100.0% 37.7%