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OK539833.1__UGL60351.1__X__00035
Bact-VirOK539833.1__UGL60351.1__X__00035
Identity
- Accession:
- OK539833 ↗
- Kingdom:
- phage
Quality
72.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Andersonviridae›
Felixounavirus›
Salmonella_phage_vB_SenM-pSJ21
TaxID: 2894725
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-126
Domain cluster:
rep: OP714164.2__UZS00898.1__X__00090__D3-105
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nwgA02 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.63 | 35.0 | 3.82e-01 | 91.0% | 65.3% |
| 4ch7A02 | 3.30.70.3460 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 30.0 | 2.65e-01 | 87.7% | 30.6% |
| 2go9A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 29.0 | 3.57e-01 | 83.6% | 87.0% |
| 1jj2L00 | 3.40.1120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal protein L15e › Ribosomal protein L15 | 0.50 | 36.0 | 3.09e-01 | 73.8% | 68.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4429744 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.61 | 35.0 | 3.93e-01 | 70.5% | 72.6% |
| 4450775 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.61 | 39.0 | 4.17e-01 | 74.6% | 75.0% |
| 4962382 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.60 | 42.0 | 4.43e-01 | 72.1% | 92.7% |
| 4298844 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 35.0 | 3.87e-01 | 71.3% | 77.9% |
| 4238947 | 304.8.1.65 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT, PF27446 | 0.56 | 47.0 | 3.74e-01 | 92.6% | 65.9% |
| 5029357 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.55 | 38.0 | 3.98e-01 | 71.3% | 75.7% |
| 4075546 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.55 | 36.0 | 4.19e-01 | 71.3% | 92.2% |
| 3804630 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 41.0 | 4.15e-01 | 93.4% | 78.4% |
| 3602142 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.54 | 37.0 | 3.99e-01 | 71.3% | 81.0% |
| 3979683 | 886.1.1.2 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › GyrI-like | 0.52 | 39.0 | 3.63e-01 | 79.5% | 85.6% |
| 3367441 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 33.0 | 3.68e-01 | 86.9% | 80.8% |
| 3946684 | 304.54.1.1 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like › BMC | 0.51 | 36.0 | 3.87e-01 | 87.7% | 82.9% |
| 3367922 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.51 | 33.0 | 3.74e-01 | 86.9% | 85.3% |
| 3822351 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.51 | 33.0 | 3.73e-01 | 86.9% | 85.3% |
| 3816819 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.51 | 30.0 | 3.40e-01 | 84.4% | 77.8% |
| 3462522 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 34.0 | 3.46e-01 | 86.9% | 68.0% |
| 3832697 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.50 | 33.0 | 3.72e-01 | 86.9% | 86.3% |
D2
medium
residues 156-195
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 48.0 | 4.23e-01 | 87.5% | 58.7% |
| 3lapA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 49.0 | 4.21e-01 | 90.0% | 54.4% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 43.0 | 3.43e-01 | 87.5% | 44.0% |
| 1q16B01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 45.0 | 3.12e-01 | 100.0% | 45.1% |