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OK570186.1__UJH95914.1__X__00016
Bact-VirOK570186.1__UJH95914.1__X__00016
Identity
- Accession:
- OK570186 ↗
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Taxonomy
TaxID: 2894291
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-82
Domain cluster:
rep: OP594723.1__UYL23178.1__X__00170__D1-83
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l3iA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 41.0 | 3.21e-01 | 70.7% | 98.4% |
| 3ttqA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 42.0 | 3.01e-01 | 74.4% | 91.1% |
| 3s5tA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.57 | 39.0 | 3.21e-01 | 70.7% | 74.5% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.56 | 41.0 | 2.80e-01 | 78.0% | 62.9% |
| 2bbhA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.55 | 39.0 | 3.26e-01 | 75.6% | 74.8% |
| 2yxdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 38.0 | 3.03e-01 | 73.2% | 98.3% |
| 3aonA00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 48.0 | 3.70e-01 | 100.0% | 51.6% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.53 | 38.0 | 2.76e-01 | 75.6% | 87.0% |
| 4mt4A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.51 | 45.0 | 2.73e-01 | 92.7% | 57.0% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.51 | 41.0 | 2.90e-01 | 93.9% | 76.0% |
| 2g16B00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.50 | 34.0 | 2.78e-01 | 70.7% | 81.6% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3190012 | 883.1.1.12 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › DUF5923 | 0.91 | 47.0 | 3.26e-01 | 93.9% | 19.1% |
| 3982740 | 5086.1.1.190 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › OEP | 0.78 | 45.0 | 3.32e-01 | 100.0% | 23.5% |
| 4337983 | 601.7.1.40 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Cas13a_C | 0.61 | 57.0 | 3.30e-01 | 100.0% | 18.8% |
| 4195636 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.59 | 53.0 | 3.91e-01 | 100.0% | 45.1% |
| 5037750 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.59 | 53.0 | 4.01e-01 | 100.0% | 47.7% |
| 4963974 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.59 | 53.0 | 3.51e-01 | 100.0% | 29.0% |
| 4541164 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.59 | 52.0 | 3.86e-01 | 100.0% | 43.2% |
| 4396101 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.57 | 45.0 | 2.84e-01 | 85.4% | 44.5% |
| 3741170 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.57 | 39.0 | 2.60e-01 | 70.7% | 46.2% |
| 3436820 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.57 | 40.0 | 3.26e-01 | 75.6% | 66.5% |
| 4126255 | 4967.1.1.25 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2+MatK_N | 0.56 | 42.0 | 2.88e-01 | 79.3% | 32.4% |
| 4990821 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.55 | 37.0 | 2.65e-01 | 70.7% | 47.6% |
| 3943722 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.55 | 46.0 | 2.82e-01 | 89.0% | 57.2% |
| 5050213 | 192.2.1.87 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ATP-synt_D | 0.55 | 47.0 | 3.67e-01 | 98.8% | 52.1% |
| 3972938 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.54 | 48.0 | 3.03e-01 | 100.0% | 78.4% |
| 4635290 | 4967.1.1.25 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2+MatK_N | 0.54 | 44.0 | 2.88e-01 | 93.9% | 41.9% |
| 4635289 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.53 | 42.0 | 2.70e-01 | 85.4% | 49.3% |
| 3593809 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.53 | 29.0 | 2.62e-01 | 85.4% | 39.1% |
| 3282895 | 912.1.1.0 ↗ | few secondary structure elements › HIV-1 VPU cytoplasmic domain › HIV-1 VPU cytoplasmic domain › HIV-1 VPU cytoplasmic domain | 0.53 | 34.0 | 2.62e-01 | 78.0% | 28.2% |
| 3912477 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.52 | 45.0 | 3.00e-01 | 93.9% | 87.8% |
| 3725152 | 376.1.3.11 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H_2 | 0.51 | 36.0 | 3.15e-01 | 73.2% | 59.2% |
| 4486052 | 304.48.1.39 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › MatK_N | 0.51 | 42.0 | 2.88e-01 | 95.1% | 62.9% |
| 3255418 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.51 | 45.0 | 2.87e-01 | 96.3% | 59.5% |
| 4979212 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.50 | 36.0 | 2.44e-01 | 75.6% | 40.6% |