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OK624832.1__UFK09565.1__X__00040

Bact-Vir

OK624832.1__UFK09565.1__X__00040

Identity

Accession:
OK624832 ↗
Kingdom:
phage

Quality

87.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_DES1

TaxID: 2894399

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-70
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kfvA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 50.0 4.31e-01 89.8% 86.0%
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.63 56.0 5.35e-01 100.0% 87.0%
1ujrA01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.62 46.0 4.13e-01 91.5% 56.6%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 5.09e-01 100.0% 92.9%
7sz2A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.59 44.0 3.82e-01 91.5% 52.2%
2btwA00 3.90.70.30 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain 0.58 49.0 3.45e-01 100.0% 40.0%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 46.0 4.53e-01 91.5% 95.5%
3npfA03 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.56 49.0 3.62e-01 100.0% 44.1%
1gn4A02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.55 34.0 2.87e-01 89.8% 31.3%
1sr4C00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 46.0 3.44e-01 94.9% 85.1%
3k0xA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 46.0 3.92e-01 98.3% 85.9%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 39.0 2.47e-01 86.4% 21.7%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.51 42.0 3.29e-01 91.5% 85.5%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 2.93e-01 94.9% 74.0%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4659299 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 60.0 5.97e-01 93.2% 81.7%
4146498 220.1.1.25 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.71 57.0 4.83e-01 89.8% 78.0%
3671396 4.1.1.316 ↗ beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.69 59.0 5.54e-01 96.6% 78.1%
3275832 4.1.1.104 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.66 56.0 5.78e-01 93.2% 100.0%
3348456 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.66 57.0 5.69e-01 96.6% 96.7%
3623890 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.66 57.0 5.05e-01 96.6% 67.1%
3296833 4.1.1.300 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.66 56.0 4.31e-01 96.6% 41.3%
3555931 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.66 57.0 4.56e-01 96.6% 49.6%
3935464 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.45e-01 93.2% 95.0%
3774821 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.70e-01 100.0% 96.7%
3222147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.68e-01 100.0% 96.7%
3820066 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 57.0 5.68e-01 100.0% 98.3%
3510942 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.64 48.0 4.47e-01 91.5% 64.0%
3464886 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 55.0 5.56e-01 96.6% 95.0%
3885050 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.64 57.0 4.04e-01 100.0% 33.7%
5072949 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.64 56.0 5.45e-01 100.0% 98.5%
4950222 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.64 56.0 4.59e-01 100.0% 80.0%
3955235 4.1.1.183 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4926 0.64 56.0 5.09e-01 100.0% 78.8%
3627951 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 52.0 4.42e-01 89.8% 80.0%
3781209 4.1.1.308 ↗ beta barrels › SH3 › SH3 › SH3 › PF31073 0.63 55.0 4.68e-01 100.0% 60.0%
4091771 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 53.0 5.29e-01 96.6% 96.7%
4941512 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.90e-01 98.3% 78.6%
3479384 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 50.0 3.44e-01 89.8% 49.0%
3754872 219.1.1.25 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT 0.62 55.0 4.38e-01 100.0% 52.5%
3254634 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.62 46.0 4.33e-01 91.5% 64.0%
3840585 219.1.1.25 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT 0.62 55.0 3.86e-01 100.0% 33.2%
3409083 220.1.1.46 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.61 50.0 3.87e-01 91.5% 79.3%
4863931 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.89e-01 96.6% 88.1%
3514556 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 51.0 4.91e-01 100.0% 84.3%
3260247 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.58 46.0 4.13e-01 93.2% 61.4%
3930643 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 48.0 4.80e-01 96.6% 96.7%
3572393 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.58 50.0 4.77e-01 100.0% 91.4%
3891578 4.1.1.232 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 0.57 49.0 4.71e-01 100.0% 95.7%
3882851 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 49.0 4.13e-01 100.0% 62.9%
2137275 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.56 45.0 4.52e-01 89.8% 94.9%
4319097 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.44e-01 94.9% 93.1%
3504834 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 47.0 4.76e-01 100.0% 98.3%
4054513 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 43.0 3.71e-01 94.9% 99.1%
3470449 4357.1.1.0 ↗ beta barrels › WWE domain › WWE domain › WWE domain 0.54 45.0 4.11e-01 94.9% 71.2%
3557904 101.1.2.580 ↗ alpha arrays › HTH › HTH › winged helix domain › DEPDC5_CTD 0.51 35.0 3.00e-01 78.0% 41.3%