←Back to structures
OK624832.1__UFK09574.1__X__00049
Bact-VirOK624832.1__UFK09574.1__X__00049
Identity
- Accession:
- OK624832 ↗
- Kingdom:
- phage
Quality
89.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-47
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qqgA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.76 | 64.0 | 4.88e-01 | 95.5% | 41.7% |
| 1h10A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.74 | 63.0 | 4.69e-01 | 100.0% | 41.0% |
| 3tcoA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.73 | 56.0 | 4.35e-01 | 88.6% | 81.1% |
| 7vbnL01 | 3.30.160.190 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › atu1810 like domain | 0.73 | 58.0 | 4.59e-01 | 90.9% | 71.6% |
| 3df7A02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.69 | 48.0 | 3.36e-01 | 72.7% | 38.0% |
| 1ywyA00 | 3.40.1170.40 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › Protein of unknown function DUF3203 | 0.69 | 51.0 | 4.34e-01 | 88.6% | 48.6% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.68 | 48.0 | 3.72e-01 | 100.0% | 34.7% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.66 | 57.0 | 4.38e-01 | 100.0% | 76.0% |
| 3fehA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 56.0 | 4.12e-01 | 100.0% | 40.3% |
| 4r5zA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.66 | 43.0 | 3.04e-01 | 93.2% | 23.8% |
| 3zm6A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.66 | 56.0 | 3.60e-01 | 100.0% | 21.1% |
| 1gzsB00 | 1.10.4120.10 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain | 0.65 | 53.0 | 3.48e-01 | 100.0% | 23.6% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.64 | 49.0 | 3.53e-01 | 90.9% | 33.6% |
| 1yw5A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.64 | 43.0 | 3.84e-01 | 86.4% | 49.2% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.63 | 44.0 | 3.35e-01 | 75.0% | 33.3% |
| 2kcwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 46.0 | 3.26e-01 | 81.8% | 61.9% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 50.0 | 3.88e-01 | 95.5% | 48.1% |
| 1xhhA00 | 2.60.40.1900 | Mainly Beta › Sandwich › Immunoglobulin-like › Beta-microseminoprotein (PSP94) domain | 0.62 | 40.0 | 3.16e-01 | 70.5% | 31.9% |
| 7kfuC01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.61 | 45.0 | 3.84e-01 | 88.6% | 48.0% |
| 6rwcA02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 38.0 | 3.93e-01 | 84.1% | 69.2% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 47.0 | 3.86e-01 | 100.0% | 45.6% |
| 2od0A00 | 3.30.1460.30 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone | 0.58 | 51.0 | 3.90e-01 | 100.0% | 67.0% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.58 | 42.0 | 3.97e-01 | 79.5% | 63.6% |
| 5sviB00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.57 | 40.0 | 3.80e-01 | 75.0% | 88.7% |
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 45.0 | 3.88e-01 | 93.2% | 97.4% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.56 | 42.0 | 2.76e-01 | 86.4% | 54.4% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 39.0 | 3.66e-01 | 79.5% | 58.6% |
| 3fwlA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 48.0 | 2.79e-01 | 97.7% | 50.5% |
| 1c8zA00 | 3.20.90.10 | Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A | 0.55 | 46.0 | 2.88e-01 | 100.0% | 82.3% |
| 1dmrA03 | 3.90.55.10 | Alpha Beta › Alpha-Beta Complex › Dimethylsulfoxide Reductase; domain 3 › Dimethylsulfoxide Reductase, domain 3 | 0.55 | 46.0 | 3.70e-01 | 93.2% | 73.6% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 36.0 | 3.61e-01 | 81.8% | 64.6% |
| 1tmoA03 | 3.90.55.10 | Alpha Beta › Alpha-Beta Complex › Dimethylsulfoxide Reductase; domain 3 › Dimethylsulfoxide Reductase, domain 3 | 0.54 | 46.0 | 3.63e-01 | 93.2% | 74.4% |
| 4ohfA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.52 | 42.0 | 2.85e-01 | 100.0% | 61.6% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5041477 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.85 | 59.0 | 5.24e-01 | 72.7% | 100.0% |
| 4251998 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.85 | 72.0 | 5.57e-01 | 100.0% | 44.2% |
| 4069833 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.83 | 71.0 | 5.00e-01 | 100.0% | 32.3% |
| 5078006 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.83 | 63.0 | 5.31e-01 | 81.8% | 91.4% |
| 5034126 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.82 | 57.0 | 5.09e-01 | 72.7% | 100.0% |
| 5060529 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.82 | 62.0 | 5.25e-01 | 81.8% | 91.4% |
| 4959767 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.79 | 54.0 | 4.91e-01 | 72.7% | 100.0% |
| 4341865 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.79 | 69.0 | 6.42e-01 | 100.0% | 85.5% |
| 3164102 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.76 | 66.0 | 6.60e-01 | 100.0% | 97.8% |
| 5008380 | 296.1.1.0 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | 0.76 | 61.0 | 4.72e-01 | 90.9% | 41.0% |
| 4583884 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.73 | 59.0 | 4.43e-01 | 100.0% | 40.8% |
| 4108971 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.72 | 59.0 | 4.52e-01 | 100.0% | 41.7% |
| 5055771 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.70 | 55.0 | 4.08e-01 | 90.9% | 49.2% |
| 3224950 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 57.0 | 4.41e-01 | 100.0% | 40.0% |
| 4001872 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.68 | 56.0 | 3.73e-01 | 100.0% | 22.2% |
| 3619018 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.68 | 51.0 | 4.78e-01 | 90.9% | 65.0% |
| 3592571 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 54.0 | 4.50e-01 | 93.2% | 68.2% |
| 5051883 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.68 | 51.0 | 4.87e-01 | 86.4% | 83.6% |
| 3912099 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.67 | 57.0 | 4.34e-01 | 100.0% | 40.0% |
| 5081740 | 2484.1.1.342 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF29288 | 0.67 | 55.0 | 3.79e-01 | 97.7% | 26.7% |
| 3656952 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 59.0 | 4.33e-01 | 100.0% | 38.3% |
| 5083508 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.66 | 55.0 | 4.36e-01 | 100.0% | 96.0% |
| 3175415 | 211.1.1.55 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF29700 | 0.65 | 45.0 | 4.05e-01 | 70.5% | 53.3% |
| 4043193 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.64 | 53.0 | 4.08e-01 | 100.0% | 40.0% |
| 3622767 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.64 | 51.0 | 4.18e-01 | 97.7% | 76.8% |
| 3245311 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 52.0 | 4.04e-01 | 97.7% | 40.0% |
| 4948090 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 50.0 | 3.54e-01 | 88.6% | 34.0% |
| 3502426 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.64 | 48.0 | 4.14e-01 | 95.5% | 100.0% |
| 3945055 | 2484.2.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain › Methyltransf_1N | 0.63 | 50.0 | 4.29e-01 | 97.7% | 52.9% |
| 3969874 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.63 | 49.0 | 4.27e-01 | 95.5% | 53.8% |
| 3578128 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 50.0 | 4.74e-01 | 93.2% | 74.5% |
| 5075225 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 49.0 | 3.66e-01 | 100.0% | 34.5% |
| 3590856 | 3226.1.1.1 ↗ | alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Xan_ur_permease | 0.61 | 51.0 | 2.97e-01 | 100.0% | 68.1% |
| 4264722 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.61 | 53.0 | 3.59e-01 | 100.0% | 67.1% |
| 3259856 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.60 | 44.0 | 3.93e-01 | 95.5% | 53.8% |
| 5070342 | 4043.1.1.2 ↗ | a+b complex topology › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_7 | 0.59 | 42.0 | 3.34e-01 | 75.0% | 58.9% |
| 3963958 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.59 | 46.0 | 4.11e-01 | 97.7% | 58.7% |
| 5017727 | 2485.1.1.166 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › YoaP | 0.59 | 46.0 | 3.94e-01 | 100.0% | 92.0% |
| 5016928 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.59 | 39.0 | 2.51e-01 | 93.2% | 13.6% |
| 3581945 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.59 | 47.0 | 4.32e-01 | 100.0% | 66.7% |
| 5013701 | 3572.1.1.2 ↗ | a+b complex topology › Cascade subunit Csa5 › Cascade subunit Csa5 › Cascade subunit Csa5 › Cas_Csa5 | 0.58 | 51.0 | 3.83e-01 | 97.7% | 42.9% |
| 3303185 | 5.3.1.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin | 0.57 | 45.0 | 3.21e-01 | 93.2% | 54.8% |
| 4929178 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.57 | 50.0 | 3.23e-01 | 100.0% | 41.5% |
| 5004274 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.57 | 41.0 | 3.45e-01 | 77.3% | 54.7% |
| 4973040 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.56 | 50.0 | 4.02e-01 | 100.0% | 87.1% |
| 4973804 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 45.0 | 3.84e-01 | 93.2% | 57.3% |
| 4618205 | 604.1.1.150 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28954 | 0.53 | 47.0 | 3.41e-01 | 100.0% | 71.7% |
| 3939023 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.52 | 38.0 | 3.19e-01 | 86.4% | 71.1% |
| 3936608 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 41.0 | 3.26e-01 | 100.0% | 40.9% |
| 3586103 | 2004.1.1.435 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_ATPase | 0.51 | 44.0 | 2.99e-01 | 97.7% | 46.3% |
| 5070539 | 3380.1.1.0 ↗ | a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 | 0.51 | 38.0 | 3.57e-01 | 79.5% | 83.6% |