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OK632026.1__UFK27497.1__X__00015
Bact-VirOK632026.1__UFK27497.1__X__00015
Identity
- Accession:
- OK632026 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-138
Domain cluster:
rep: MN850656.1__QHJ72914.1__X__00017__D6-152
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qbyA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 48.0 | 5.39e-01 | 91.2% | 97.1% |
| 4d81A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 39.0 | 4.63e-01 | 70.6% | 88.3% |
| 7uzqK01 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.57 | 48.0 | 3.59e-01 | 93.4% | 69.2% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.56 | 32.0 | 3.91e-01 | 86.8% | 87.4% |
| 1jkwA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 40.0 | 3.68e-01 | 78.7% | 62.5% |
| 3tp3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 37.0 | 3.69e-01 | 75.7% | 87.8% |
| 3rosA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 42.0 | 3.42e-01 | 89.0% | 90.3% |
| 4mk6A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 38.0 | 3.47e-01 | 78.7% | 63.3% |
| 1wgwA00 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.51 | 33.0 | 3.75e-01 | 78.7% | 89.9% |
| 6vqqA01 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.51 | 40.0 | 3.24e-01 | 83.8% | 98.1% |
| 1uxtA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.50 | 43.0 | 3.48e-01 | 94.9% | 97.1% |
| 4jz6A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.50 | 41.0 | 3.37e-01 | 88.2% | 87.0% |
| 2yzsA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.50 | 41.0 | 3.51e-01 | 89.0% | 71.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4011171 | 192.15.1.126 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › DUF7607 | 0.62 | 29.0 | 3.21e-01 | 83.8% | 53.0% |
| 3957022 | 3352.1.1.11 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DUF3367 | 0.58 | 41.0 | 2.95e-01 | 73.5% | 84.1% |
| 3756619 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.56 | 37.0 | 3.61e-01 | 86.0% | 60.0% |
| 3287253 | 150.1.2.6 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › FA_desaturase_2 | 0.53 | 42.0 | 3.20e-01 | 83.8% | 79.7% |
| 3221092 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 35.0 | 3.40e-01 | 92.6% | 61.3% |
| 3407641 | 106.1.1.8 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › HisK-N-like | 0.50 | 37.0 | 3.58e-01 | 76.5% | 89.0% |
| 4324738 | 160.1.1.1 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_ab_C | 0.50 | 34.0 | 3.24e-01 | 72.8% | 56.4% |
| 3480885 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.50 | 43.0 | 3.38e-01 | 93.4% | 83.1% |
D2
high
residues 178-227
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lf0A01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.90 | 62.0 | 5.79e-01 | 72.0% | 61.7% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.87 | 59.0 | 5.51e-01 | 72.0% | 59.7% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 55.0 | 5.11e-01 | 76.0% | 74.2% |
| 3htmA02 | 6.10.250.3030 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.75 | 56.0 | 6.05e-01 | 94.0% | 100.0% |
| 2b6cA01 | 1.20.1660.10 | Mainly Alpha › Up-down Bundle › ARM repeat fold › Hypothetical protein (EF3068) | 0.75 | 65.0 | 4.94e-01 | 98.0% | 96.6% |
| 1grjA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.75 | 51.0 | 4.47e-01 | 72.0% | 52.7% |
| 4l8eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.73 | 52.0 | 4.00e-01 | 76.0% | 34.5% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.73 | 51.0 | 3.99e-01 | 76.0% | 35.9% |
| 3tjtA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.70 | 50.0 | 4.47e-01 | 76.0% | 84.5% |
| 2d5wA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.68 | 46.0 | 2.97e-01 | 70.0% | 18.6% |
| 4bx8A03 | 3.90.830.10 | Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a | 0.67 | 48.0 | 3.75e-01 | 78.0% | 97.2% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.66 | 46.0 | 3.96e-01 | 76.0% | 47.1% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.66 | 55.0 | 5.31e-01 | 96.0% | 100.0% |
| 6ruiB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.64 | 54.0 | 3.73e-01 | 98.0% | 80.8% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 43.0 | 4.05e-01 | 70.0% | 80.0% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 42.0 | 3.78e-01 | 72.0% | 67.6% |
| 1x4pA00 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.59 | 48.0 | 4.52e-01 | 98.0% | 90.9% |
| 3zh9B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 50.0 | 4.52e-01 | 100.0% | 74.3% |
| 3ll7A01 | 1.10.10.1110 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Methyltransferase PG1098, N-terminal domain | 0.55 | 42.0 | 3.90e-01 | 92.0% | 66.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 184768 | 3331.1.1.1 ↗ | a+b two layers › Uncharacterized protein yibL › Uncharacterized protein yibL › Uncharacterized protein yibL › DUF2810 | 0.90 | 62.0 | 4.55e-01 | 72.0% | 30.0% |
| 4328747 | 148.1.3.209 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › GrpE | 0.89 | 62.0 | 4.58e-01 | 72.0% | 32.5% |
| 3285492 | 507.1.1.2 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaG_DnaB_bind | 0.89 | 61.0 | 4.13e-01 | 72.0% | 22.6% |
| 3926919 | 3710.1.1.0 ↗ | alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain | 0.89 | 62.0 | 5.77e-01 | 72.0% | 60.0% |
| 4049273 | 3710.1.1.1 ↗ | alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › CHD5 | 0.88 | 60.0 | 5.32e-01 | 72.0% | 52.9% |
| 3405837 | 3652.1.1.0 ↗ | alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 | 0.83 | 56.0 | 6.08e-01 | 72.0% | 87.5% |
| 4438372 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.81 | 56.0 | 3.37e-01 | 72.0% | 11.8% |
| 3456203 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.77 | 63.0 | 4.53e-01 | 96.0% | 31.0% |
| 3390844 | 109.4.1.27 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › W2 | 0.76 | 64.0 | 4.54e-01 | 100.0% | 36.4% |
| 3673670 | 639.2.1.4 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › Ovate | 0.70 | 59.0 | 5.47e-01 | 96.0% | 95.4% |
| 3999647 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 56.0 | 4.39e-01 | 100.0% | 45.2% |
| 3810074 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.66 | 57.0 | 4.96e-01 | 100.0% | 84.8% |
| 3802856 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.65 | 54.0 | 5.32e-01 | 100.0% | 87.3% |
| 3250247 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.64 | 56.0 | 5.34e-01 | 100.0% | 90.0% |
| 3250931 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.64 | 55.0 | 4.88e-01 | 100.0% | 88.0% |
| 3699669 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.64 | 51.0 | 5.34e-01 | 98.0% | 100.0% |
| 3788139 | 2485.1.1.11 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Phosducin | 0.63 | 46.0 | 3.04e-01 | 94.0% | 20.5% |
| 4040561 | 176.1.1.0 ↗ | alpha arrays › Annexin › Annexin › Annexin | 0.62 | 50.0 | 4.46e-01 | 94.0% | 82.7% |
| 3821814 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.61 | 45.0 | 4.65e-01 | 90.0% | 88.9% |