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OK632026.1__UFK27518.1__X__00036

Bact-Vir

OK632026.1__UFK27518.1__X__00036

Identity

Accession:
OK632026 ↗
Kingdom:
phage

Quality

82.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-32_51-139
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wzpP01 2.40.30.210 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.84 65.0 6.36e-01 100.0% 75.2%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.75 41.0 4.57e-01 76.5% 68.4%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.75 70.0 6.23e-01 100.0% 78.1%
4acvA00 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.73 55.0 5.20e-01 100.0% 67.2%
1rtzA00 3.30.70.560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.71 43.0 3.79e-01 76.5% 40.8%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.71 39.0 4.34e-01 74.5% 68.4%
1b7yB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.67 44.0 4.73e-01 77.5% 77.9%
6toaF01 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.67 55.0 5.08e-01 100.0% 69.2%
4qjvB00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.66 41.0 4.27e-01 100.0% 67.0%
2mdaA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 44.0 4.56e-01 97.1% 73.7%
2cc6A00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.64 39.0 4.85e-01 76.5% 98.4%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.64 51.0 4.64e-01 100.0% 64.0%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.63 43.0 3.09e-01 99.0% 23.5%
7d58G01 3.30.1490.120 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain 0.62 44.0 4.94e-01 76.5% 98.7%
3f1sB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 40.0 4.14e-01 100.0% 72.0%
1go3E02 3.30.1490.120 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain 0.61 43.0 4.77e-01 79.4% 93.8%
1faxA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 41.0 4.08e-01 100.0% 66.4%
2l25A00 3.30.2000.20 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.60 51.0 4.58e-01 100.0% 66.7%
6wubf01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.60 39.0 4.02e-01 76.5% 70.2%
5k8mA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 44.0 4.11e-01 78.4% 74.0%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.59 54.0 4.24e-01 100.0% 48.6%
4o38A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 42.0 4.37e-01 100.0% 79.2%
5fcrC02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 41.0 4.10e-01 100.0% 69.2%
2oq5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 40.0 3.98e-01 100.0% 67.3%
2y3uA02 3.30.980.50 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › 0.59 46.0 4.51e-01 100.0% 77.0%
7pzoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 40.0 4.08e-01 100.0% 72.9%
1eq9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 40.0 3.97e-01 100.0% 67.6%
3hluA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 32.0 3.67e-01 90.2% 72.6%
3c0wA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 37.0 3.57e-01 100.0% 55.0%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.58 36.0 3.33e-01 97.1% 48.4%
2ppqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 37.0 3.89e-01 98.0% 71.3%
4hvzA02 3.30.70.2970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF541), domain 2 0.57 43.0 4.17e-01 79.4% 74.1%
1orfA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 38.0 3.84e-01 100.0% 68.6%
3tvjB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 39.0 3.90e-01 100.0% 70.1%
2w59B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 40.0 3.91e-01 100.0% 67.5%
6r2wH02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 39.0 3.84e-01 100.0% 68.2%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 38.0 3.66e-01 100.0% 61.2%
1ohgA01 3.30.2400.10 Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › Major capsid protein gp5 0.55 45.0 4.10e-01 94.1% 90.4%
1fiwA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 40.0 3.87e-01 100.0% 67.5%
1ntpA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 36.0 3.68e-01 100.0% 68.9%
3pcoB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.53 32.0 3.38e-01 75.5% 64.9%
4afhE00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.53 47.0 3.73e-01 100.0% 47.2%
3dfjA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 37.0 3.67e-01 100.0% 67.3%
5f8zA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 37.0 3.68e-01 100.0% 67.9%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 36.0 3.36e-01 100.0% 57.0%
1vi7A01 3.30.230.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Impact, N-terminal domain 0.50 43.0 3.92e-01 100.0% 71.1%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587074 1.1.13.17 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_N 0.79 63.0 6.18e-01 100.0% 78.2%
4954561 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 72.0 6.52e-01 100.0% 85.9%
1117606 1.1.13.17 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_N 0.75 70.0 6.33e-01 100.0% 80.6%
3513366 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 69.0 5.71e-01 100.0% 72.6%
3451456 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.75 45.0 4.69e-01 100.0% 64.2%
1444177 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 70.0 6.28e-01 100.0% 79.4%
3165990 310.3.1.22 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PF27480, PF30181 0.73 49.0 4.72e-01 100.0% 60.9%
3305434 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 45.0 4.75e-01 100.0% 70.0%
3944239 1.1.13.51 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU 0.72 58.0 5.82e-01 100.0% 84.8%
3384789 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.71 45.0 4.38e-01 100.0% 58.2%
4034209 1.1.13.4 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.71 66.0 5.96e-01 100.0% 85.1%
3367441 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 44.0 4.50e-01 100.0% 63.6%
4888732 1.1.13.4 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.71 66.0 5.64e-01 100.0% 69.2%
3345132 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.71 43.0 4.13e-01 100.0% 53.0%
3315331 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.71 43.0 4.80e-01 100.0% 77.5%
4033579 1.1.13.4 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.71 64.0 6.03e-01 100.0% 87.2%
3302370 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 44.0 4.82e-01 100.0% 77.1%
3306325 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.70 43.0 4.57e-01 100.0% 68.9%
4398167 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.70 44.0 4.76e-01 100.0% 73.9%
3589225 304.124.1.0 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.70 54.0 4.94e-01 100.0% 61.5%
3285929 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 43.0 4.55e-01 100.0% 70.0%
3434168 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.69 43.0 4.33e-01 100.0% 61.0%
3369744 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 45.0 4.32e-01 99.0% 58.3%
3966825 1.1.13.51 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU 0.69 61.0 5.76e-01 100.0% 81.7%
4292806 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 44.0 4.43e-01 100.0% 63.8%
3980535 1.1.13.51 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU 0.68 62.0 5.65e-01 100.0% 82.2%
3615541 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 52.0 4.87e-01 100.0% 65.6%
3802659 304.8.1.66 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7049 0.68 50.0 4.96e-01 100.0% 74.3%
3949263 304.124.1.9 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 0.68 50.0 5.02e-01 100.0% 75.2%
5004559 1.1.13.75 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube 0.68 61.0 5.59e-01 100.0% 88.9%
4030972 304.124.1.0 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.66 49.0 4.65e-01 100.0% 65.8%
3981654 1.1.13.40 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail 0.65 59.0 5.77e-01 100.0% 92.7%
3307398 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.65 43.0 4.27e-01 100.0% 63.6%
3355267 872.1.1.0 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.65 47.0 5.24e-01 80.4% 97.5%
3959682 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 40.0 4.43e-01 100.0% 82.7%
3585212 304.124.1.0 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.64 58.0 4.56e-01 100.0% 76.3%
3721769 304.8.1.22 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.64 37.0 3.78e-01 79.4% 57.0%
3199163 304.45.1.1 a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK 0.64 41.0 3.40e-01 77.5% 37.7%
3623212 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 40.0 4.00e-01 77.5% 61.0%
1904880 304.45.1.1 a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK 0.63 41.0 3.54e-01 77.5% 43.2%
3508633 872.1.1.0 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.62 46.0 4.78e-01 81.4% 84.2%
3510623 872.3.1.7 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 0.62 46.0 4.29e-01 80.4% 62.0%
3991844 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 39.0 3.98e-01 78.4% 66.0%
4888780 304.124.1.5 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › T4-gp15_tss 0.61 54.0 4.18e-01 100.0% 52.6%
3202466 304.133.1.0 a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein 0.60 45.0 4.83e-01 79.4% 97.6%
5083619 304.124.1.0 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.60 52.0 4.66e-01 100.0% 68.5%
4951176 304.133.1.1 a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL 0.60 45.0 4.18e-01 81.4% 63.1%
3970985 304.124.1.9 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 0.59 52.0 4.75e-01 100.0% 72.1%
4957560 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.59 53.0 4.93e-01 100.0% 81.5%
3971017 304.133.1.1 a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL 0.59 43.0 4.28e-01 79.4% 72.7%
3270041 872.3.1.7 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 0.58 44.0 4.37e-01 80.4% 77.1%
3652827 10.10.1.1 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.58 41.0 3.74e-01 78.4% 54.8%
4131100 1.1.7.87 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.58 43.0 3.98e-01 100.0% 60.0%
4091380 304.133.1.1 a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL 0.58 44.0 4.34e-01 81.4% 76.4%
3948250 304.124.1.9 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 0.58 51.0 4.49e-01 100.0% 69.7%
3088027 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.57 47.0 3.54e-01 91.2% 81.0%
4379611 304.102.1.6 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.57 47.0 3.69e-01 92.2% 70.4%
2800329 872.1.1.1 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N 0.57 42.0 4.29e-01 81.4% 82.5%
4929759 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.56 49.0 4.28e-01 100.0% 88.7%
4982756 304.102.1.2 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD 0.54 47.0 3.89e-01 98.0% 92.6%
3585375 304.102.1.3 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.54 46.0 3.19e-01 95.1% 66.0%
286927 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.52 36.0 3.30e-01 100.0% 54.5%
3621732 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.51 38.0 3.79e-01 78.4% 79.0%
4954483 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.50 38.0 3.57e-01 97.1% 65.6%
3615101 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.50 43.0 3.01e-01 95.1% 52.4%