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OK665841.1__UEW68522.1__X__00004

Bact-Vir

OK665841.1__UEW68522.1__X__00004

Identity

Accession:
OK665841 ↗
Kingdom:
phage

Quality

94.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Burkholderia_phage_BgVeeders33

TaxID: 2894336

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-64
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26078.1 best Baseplate_J_M 67.3 1.70e-18 100.0% 82.2%
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5gxdA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.80 74.0 5.60e-01 100.0% 47.4%
3h2tA01 3.30.300.200 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.77 69.0 6.58e-01 100.0% 85.9%
7nasX01 3.30.300.70 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › RimP-like superfamily, N-terminal 0.77 70.0 6.36e-01 100.0% 83.5%
4isbB02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.76 69.0 5.65e-01 100.0% 59.8%
1nnnA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.74 66.0 5.24e-01 100.0% 50.4%
3laxA00 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.74 66.0 5.49e-01 100.0% 63.2%
1amuA04 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.73 61.0 5.28e-01 100.0% 59.4%
3nyqA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.72 62.0 5.59e-01 100.0% 68.6%
2vsqA06 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.72 61.0 5.08e-01 100.0% 54.3%
2y27A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.71 62.0 5.25e-01 100.0% 62.1%
8affD01 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.71 59.0 5.52e-01 100.0% 74.4%
4l4qA02 3.30.300.340 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › S-adenosylmethionine synthetase, N-terminal domain 0.71 62.0 4.91e-01 100.0% 59.1%
2dyjA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.68 58.0 5.20e-01 100.0% 78.0%
3e7wA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.68 59.0 4.90e-01 100.0% 55.9%
2zztA00 3.30.70.1350 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain 0.67 57.0 5.31e-01 100.0% 75.6%
2pt7G01 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.67 58.0 5.37e-01 100.0% 85.9%
4bpeC01 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.67 58.0 5.14e-01 100.0% 72.8%
6pwkA02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.66 55.0 3.72e-01 93.4% 32.5%
3tr3A00 3.30.300.90 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like 0.66 55.0 5.19e-01 100.0% 76.6%
5nfmA00 3.30.300.90 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like 0.64 56.0 5.26e-01 100.0% 81.3%
1yj7D02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.64 56.0 5.00e-01 100.0% 70.1%
4oycB00 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.64 55.0 4.93e-01 100.0% 75.3%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 41.0 4.03e-01 82.0% 61.2%
2idbA02 3.40.1670.10 Alpha Beta › 3-Layer(aba) Sandwich › UbiD C-terminal domain-like › UbiD C-terminal domain-like 0.63 51.0 4.23e-01 100.0% 48.3%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 41.0 4.05e-01 82.0% 62.1%
4g1iA02 3.30.300.170 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.62 52.0 5.05e-01 100.0% 85.9%
2mcqA01 3.30.300.90 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like 0.61 52.0 4.93e-01 100.0% 81.3%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 42.0 4.10e-01 80.3% 66.7%
2dhmA01 3.30.300.90 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like 0.61 51.0 4.61e-01 100.0% 75.6%
4mfzA02 3.40.630.120 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › 0.61 50.0 3.94e-01 100.0% 40.8%
2cxcA02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.60 50.0 4.85e-01 100.0% 89.9%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 42.0 4.17e-01 82.0% 71.9%
3dnsA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 48.0 3.92e-01 100.0% 58.0%
2jdcA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 48.0 3.79e-01 100.0% 47.6%
3fveA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.57 48.0 3.87e-01 100.0% 75.2%
2fbmA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.56 44.0 3.13e-01 100.0% 26.7%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 35.0 3.47e-01 82.0% 59.1%
4avaA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 46.0 3.40e-01 100.0% 33.9%
1wdkA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.54 42.0 2.78e-01 100.0% 17.9%
3d3sA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 45.0 3.44e-01 100.0% 40.3%
6eqoA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.53 43.0 2.82e-01 100.0% 18.1%
4jyjB00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.53 38.0 2.59e-01 90.2% 18.7%
1ha6A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 37.0 3.60e-01 82.0% 65.7%
4iuwA02 1.10.1380.10 Mainly Alpha › Orthogonal Bundle › Neutral endopeptidase; domain 2 › Neutral endopeptidase , domain2 0.52 42.0 2.76e-01 98.4% 40.7%
2qyfB00 3.30.900.20 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › 0.52 42.0 3.03e-01 90.2% 62.2%
2r6oA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.52 40.0 2.76e-01 90.2% 47.7%
4qnwA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 42.0 2.71e-01 100.0% 29.0%
1hzdA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 41.0 2.94e-01 98.4% 27.7%
4og1A01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 39.0 2.91e-01 100.0% 28.1%
3ju1B00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 40.0 2.54e-01 90.2% 15.6%
3sy8C02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.51 39.0 2.74e-01 90.2% 47.6%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 39.0 3.20e-01 86.9% 60.6%
1dl5A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 42.0 3.05e-01 100.0% 52.7%
4lj3A00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.50 39.0 2.74e-01 95.1% 91.4%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4636522 327.20.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Baseplate structural protein gp6 C-terminal domain I › Baseplate structural protein gp6 C-terminal domain I › PF26078 0.96 91.0 7.93e-01 100.0% 83.5%
4140245 327.20.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Baseplate structural protein gp6 C-terminal domain I › Baseplate structural protein gp6 C-terminal domain I › PF26078 0.86 79.0 7.35e-01 100.0% 88.0%
3941625 327.20.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Baseplate structural protein gp6 C-terminal domain I › Baseplate structural protein gp6 C-terminal domain I › PF26078 0.84 77.0 7.00e-01 100.0% 76.2%
3674608 327.4.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain 0.80 72.0 6.43e-01 100.0% 82.4%
3361731 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.79 72.0 5.94e-01 100.0% 66.7%
1870491 327.20.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Baseplate structural protein gp6 C-terminal domain I › Baseplate structural protein gp6 C-terminal domain I › Gp6_C-I 0.79 70.0 6.68e-01 100.0% 84.7%
4665987 327.4.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain 0.78 71.0 6.79e-01 100.0% 95.7%
3956580 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.77 64.0 5.25e-01 100.0% 50.9%
3332785 327.4.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain 0.77 68.0 5.77e-01 100.0% 73.0%
4980948 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.76 69.0 6.15e-01 100.0% 71.8%
4186952 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.75 68.0 5.54e-01 100.0% 60.0%
4967501 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.75 68.0 5.39e-01 100.0% 53.3%
5014112 327.7.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.75 66.0 5.75e-01 100.0% 73.7%
5073029 327.5.1.9 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding 0.74 66.0 4.04e-01 100.0% 16.7%
3960051 327.5.1.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_2 0.73 65.0 5.36e-01 100.0% 57.3%
4950923 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.73 65.0 4.93e-01 100.0% 45.7%
3289528 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.72 64.0 5.43e-01 100.0% 61.0%
4809219 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.72 61.0 5.75e-01 100.0% 77.6%
4969921 327.2.1.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › NTP_transf_2 0.72 64.0 5.24e-01 100.0% 60.0%
5077484 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.72 64.0 5.03e-01 100.0% 49.6%
3446415 327.2.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › BolA 0.70 61.0 5.32e-01 100.0% 65.3%
3970968 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.69 61.0 5.03e-01 100.0% 57.3%
4046978 327.2.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › BolA 0.68 59.0 5.10e-01 100.0% 68.0%
4937048 327.7.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.68 54.0 5.64e-01 98.4% 98.2%
3347092 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.68 59.0 5.32e-01 100.0% 74.1%
4975248 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.68 59.0 5.43e-01 100.0% 78.8%
5083492 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.67 57.0 5.21e-01 100.0% 70.6%
4927819 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.67 58.0 5.36e-01 100.0% 81.2%
3788378 327.6.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › NifU 0.66 57.0 4.72e-01 100.0% 57.4%
5049699 327.11.1.7 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_NusA_2nd 0.66 57.0 5.42e-01 100.0% 93.3%
4300929 327.6.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › NifU 0.66 56.0 5.34e-01 100.0% 86.7%
4049903 327.2.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › BolA 0.66 57.0 5.09e-01 100.0% 81.1%
5033079 7584.1.1.11 ↗ a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › PF27533 0.66 56.0 3.39e-01 100.0% 14.6%
4928237 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.66 58.0 4.22e-01 100.0% 36.5%
5033721 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.65 56.0 4.78e-01 100.0% 64.8%
3606051 327.6.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › NifU 0.65 58.0 5.09e-01 100.0% 71.1%
3700201 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.65 57.0 5.26e-01 100.0% 77.5%
5045447 327.18.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A 0.65 56.0 5.38e-01 100.0% 84.3%
4929037 327.11.1.7 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_NusA_2nd 0.65 56.0 5.21e-01 100.0% 77.5%
5055194 327.18.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A 0.65 55.0 5.42e-01 100.0% 90.8%
3387430 327.6.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › NifU 0.65 56.0 5.21e-01 100.0% 77.5%
3516631 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.65 55.0 5.14e-01 100.0% 77.5%
4863910 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.65 52.0 4.82e-01 100.0% 70.0%
5050963 327.10.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related 0.64 55.0 5.43e-01 100.0% 90.8%
3291426 327.10.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related 0.64 57.0 5.10e-01 100.0% 81.2%
5033655 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.64 55.0 4.93e-01 100.0% 70.0%
5011352 327.18.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A 0.64 57.0 5.56e-01 100.0% 89.7%
5011351 327.18.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A 0.64 55.0 5.40e-01 100.0% 92.3%
3388342 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.64 55.0 5.21e-01 100.0% 81.3%
1032344 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.64 43.0 3.91e-01 82.0% 51.9%
4955280 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.63 54.0 5.22e-01 100.0% 84.3%
4417076 327.10.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related 0.63 55.0 4.99e-01 100.0% 81.2%
4026116 327.2.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like 0.63 53.0 4.65e-01 100.0% 64.6%
4940631 231.1.2.6 ↗ a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › DmpA/ArgJ › DUF2070 0.63 50.0 3.16e-01 100.0% 15.7%
5039990 231.1.2.6 ↗ a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › DmpA/ArgJ › DUF2070 0.63 48.0 3.09e-01 98.4% 16.1%
1106826 327.2.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › BolA 0.61 52.0 4.89e-01 100.0% 79.2%
4984544 327.11.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.61 51.0 4.72e-01 100.0% 77.1%
4383517 327.11.1.7 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_NusA_2nd 0.61 52.0 5.05e-01 100.0% 91.4%
5028076 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.61 52.0 4.03e-01 100.0% 48.3%
4271270 2003.1.5.53 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.60 48.0 3.35e-01 100.0% 25.5%
5037270 2494.1.1.2 ↗ a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › tRNA-Thr_ED 0.60 47.0 3.87e-01 90.2% 62.4%
3705694 2484.1.1.153 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.60 50.0 3.14e-01 90.2% 18.0%
4957434 213.5.1.1 ↗ a+b three layers › Nat/Ivy › AlkZ C-terminal domain › AlkZ C-terminal domain › AlkZ-like 0.60 50.0 4.45e-01 100.0% 97.9%
3859059 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.59 41.0 3.60e-01 83.6% 47.8%
5037775 327.1.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Alpha-lytic protease prodomain › Alpha-lytic protease prodomain 0.59 44.0 4.37e-01 100.0% 76.9%
3890480 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.59 37.0 3.54e-01 80.3% 52.0%
5078028 3186.1.1.7 ↗ a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › DUF2070 0.59 52.0 3.83e-01 100.0% 43.0%
4947002 327.18.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A 0.59 48.0 4.69e-01 100.0% 85.5%
4979404 327.11.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 0.59 50.0 3.93e-01 100.0% 44.3%
5057363 327.18.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A 0.58 47.0 4.61e-01 100.0% 85.3%
4970277 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.58 48.0 3.07e-01 100.0% 17.3%
168869 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.58 48.0 3.92e-01 100.0% 58.0%
5052286 2494.1.1.2 ↗ a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › tRNA-Thr_ED 0.57 43.0 3.25e-01 90.2% 75.7%
4326209 327.10.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related 0.55 46.0 4.32e-01 100.0% 87.5%
5031376 2486.1.1.1 ↗ a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.54 40.0 2.66e-01 72.1% 47.4%
3819272 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.54 46.0 3.34e-01 100.0% 34.1%
4962358 2486.1.1.1 ↗ a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.53 43.0 2.90e-01 100.0% 21.9%
3682165 2484.1.1.153 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.52 41.0 3.14e-01 100.0% 32.8%
D2 high residues 67-148
PDB
Domain cluster: rep: NC_054725.1__YP_010059442.1__KHQ85_gp192__00192__D466-576
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26079.1 best Baseplate_J_C 42.5 8.30e-11 95.1% 98.8%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3popA02 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.64 52.0 3.69e-01 87.8% 69.4%
1u0sA00 3.30.70.1110 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Histidine kinase CheA-like, P2 response regulator-binding domain 0.59 45.0 4.52e-01 82.9% 100.0%
1y7pB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 42.0 4.26e-01 76.8% 98.8%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 40.0 4.03e-01 73.2% 89.0%
2jv2A00 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.56 44.0 4.55e-01 100.0% 93.4%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 38.0 3.75e-01 70.7% 83.3%
1sglA00 3.90.730.10 Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like 0.54 45.0 3.38e-01 91.5% 93.2%
1jy5A00 3.90.730.10 Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like 0.53 44.0 3.33e-01 91.5% 92.6%
2bj3D02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.53 37.0 3.81e-01 75.6% 95.1%
2nzcB00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.52 38.0 3.83e-01 76.8% 93.8%
1wlfA02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.52 43.0 4.41e-01 100.0% 97.5%
3upsA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.52 35.0 3.16e-01 97.6% 52.8%
1cz4A02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.50 43.0 4.32e-01 98.8% 98.8%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4453960 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.98 92.0 9.32e-01 97.6% 98.8%
4093853 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.98 95.0 9.47e-01 100.0% 98.8%
4565831 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.90 84.0 8.14e-01 98.8% 97.8%
5002740 3228.1.1.0 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III 0.87 81.0 7.24e-01 100.0% 97.3%
4957578 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.87 81.0 7.81e-01 100.0% 98.9%
3943567 3228.1.1.0 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III 0.85 78.0 7.30e-01 100.0% 100.0%
5004557 3228.1.1.0 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III 0.85 77.0 6.92e-01 98.8% 98.2%
1870475 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.75 68.0 6.61e-01 100.0% 94.5%
3977755 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.74 65.0 6.48e-01 97.6% 98.8%
5026971 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.65 48.0 4.75e-01 76.8% 100.0%
4886051 304.8.1.8 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.62 43.0 4.43e-01 73.2% 100.0%
5073608 304.16.1.0 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like 0.62 47.0 4.66e-01 81.7% 98.9%
4186587 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 44.0 4.53e-01 78.0% 100.0%
3313414 229.1.1.7 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › TRIP13_N 0.59 52.0 5.09e-01 100.0% 95.6%
3615532 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 42.0 4.28e-01 75.6% 93.8%
3718413 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.58 48.0 4.92e-01 96.3% 97.5%
4468514 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 43.0 4.38e-01 80.5% 100.0%
3743678 148.1.3.41 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM5_C 0.57 39.0 4.19e-01 72.0% 100.0%
3588764 101.1.2.16 ↗ alpha arrays › HTH › HTH › winged helix domain › Rep3_N 0.57 41.0 3.68e-01 76.8% 83.3%
5039693 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.56 44.0 4.35e-01 89.0% 98.9%
5073964 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.55 47.0 4.62e-01 100.0% 96.7%
4964172 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.53 45.0 4.47e-01 100.0% 92.9%
6000 229.1.1.3 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX-1N 0.52 43.0 4.41e-01 100.0% 97.5%
3255740 229.1.1.3 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX-1N 0.52 42.0 4.27e-01 100.0% 96.2%
4026824 101.1.2.377 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM5_C 0.51 39.0 4.04e-01 84.1% 93.6%
1891444 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 36.0 3.33e-01 76.8% 71.6%