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OK665841.1__UEW68548.1__X__00030
Bact-VirOK665841.1__UEW68548.1__X__00030
Identity
- Accession:
- OK665841 ↗
- Kingdom:
- phage
Quality
89.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-87
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a5yB01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.67 | 59.0 | 5.34e-01 | 100.0% | 78.9% |
| 2n7zA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.63 | 55.0 | 5.05e-01 | 100.0% | 93.4% |
| 1n3kA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.63 | 55.0 | 4.71e-01 | 100.0% | 61.5% |
| 4xxiA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.61 | 49.0 | 4.04e-01 | 88.5% | 75.5% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 41.0 | 4.40e-01 | 70.5% | 97.0% |
| 2mn4A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.60 | 53.0 | 5.02e-01 | 100.0% | 95.7% |
| 3vkjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 42.0 | 2.79e-01 | 74.4% | 66.9% |
| 3beeA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 42.0 | 4.02e-01 | 73.1% | 65.9% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.59 | 49.0 | 4.95e-01 | 100.0% | 94.9% |
| 3ptwA01 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.58 | 50.0 | 3.63e-01 | 100.0% | 81.3% |
| 1d2zA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 49.0 | 4.56e-01 | 97.4% | 79.4% |
| 2zopA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.56 | 42.0 | 3.79e-01 | 82.1% | 62.5% |
| 8jpdG01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.55 | 42.0 | 3.55e-01 | 85.9% | 86.9% |
| 3vovA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 41.0 | 3.37e-01 | 82.1% | 85.1% |
| 5tk8A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.55 | 42.0 | 3.25e-01 | 85.9% | 88.5% |
| 2xtzA02 | 1.10.400.10 | Mainly Alpha › Orthogonal Bundle › GI Alpha 1, domain 2-like › GI Alpha 1, domain 2-like | 0.54 | 46.0 | 4.05e-01 | 100.0% | 82.5% |
| 1z7dA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 44.0 | 3.27e-01 | 94.9% | 81.2% |
| 1f5xA00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.51 | 42.0 | 3.23e-01 | 96.2% | 75.0% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5012960 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.71 | 61.0 | 5.88e-01 | 97.4% | 91.1% |
| 3663785 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.68 | 47.0 | 3.40e-01 | 73.1% | 26.7% |
| 4958662 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.64 | 55.0 | 4.10e-01 | 97.4% | 61.2% |
| 1867991 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.64 | 53.0 | 5.30e-01 | 98.7% | 92.5% |
| 5049215 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.62 | 53.0 | 5.13e-01 | 100.0% | 100.0% |
| 3920796 | 110.1.1.1 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death | 0.62 | 55.0 | 5.17e-01 | 100.0% | 86.3% |
| 54487 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.61 | 48.0 | 4.18e-01 | 83.3% | 76.5% |
| 3675493 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 44.0 | 3.58e-01 | 75.6% | 42.1% |
| 4352327 | 4040.1.1.5 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › DUF1612 | 0.61 | 43.0 | 3.12e-01 | 75.6% | 63.7% |
| 3352354 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.61 | 46.0 | 3.80e-01 | 79.5% | 57.0% |
| 4945578 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.61 | 50.0 | 3.91e-01 | 93.6% | 96.7% |
| 3801801 | 109.4.1.1293 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 | 0.60 | 45.0 | 4.01e-01 | 79.5% | 72.7% |
| 5021635 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.60 | 41.0 | 3.35e-01 | 71.8% | 81.2% |
| 3771567 | 110.1.1.1 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death | 0.60 | 52.0 | 4.72e-01 | 100.0% | 72.7% |
| 3371871 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 43.0 | 3.27e-01 | 75.6% | 32.4% |
| 2323973 | 109.4.1.124 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DNA_alkylation | 0.59 | 47.0 | 3.42e-01 | 92.3% | 47.2% |
| 4644218 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.57 | 40.0 | 3.89e-01 | 78.2% | 67.1% |
| 3357666 | 109.59.1.16 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › PPR | 0.56 | 42.0 | 3.85e-01 | 79.5% | 78.1% |
| 3963455 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.56 | 42.0 | 3.43e-01 | 78.2% | 86.2% |
| 4118192 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.52 | 45.0 | 3.24e-01 | 100.0% | 39.0% |
| 4271959 | 108.1.1.71 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › DUF5580_M | 0.50 | 38.0 | 3.41e-01 | 100.0% | 55.7% |
D2
high
residues 104-169
Domain cluster:
rep: MK733261.1__QCW23515.1__X__00047__D97-156
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06892.17 best | Phage_CP76 | 29.0 | 1.30e-06 | 90.9% | 36.3% |
CATH (78)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.90 | 80.0 | 7.75e-01 | 93.9% | 91.7% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.90 | 76.0 | 6.42e-01 | 100.0% | 57.8% |
| 7zd5C01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.89 | 82.0 | 5.11e-01 | 100.0% | 23.0% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.88 | 74.0 | 7.53e-01 | 90.9% | 93.8% |
| 2ddhA04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.87 | 81.0 | 6.31e-01 | 100.0% | 50.0% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.87 | 77.0 | 6.53e-01 | 100.0% | 61.4% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 80.0 | 7.57e-01 | 100.0% | 88.2% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.86 | 76.0 | 7.34e-01 | 100.0% | 86.7% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.85 | 75.0 | 7.01e-01 | 100.0% | 77.8% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.85 | 69.0 | 7.22e-01 | 92.4% | 95.0% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.85 | 79.0 | 6.14e-01 | 100.0% | 54.1% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.85 | 69.0 | 6.89e-01 | 86.4% | 100.0% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.85 | 76.0 | 7.11e-01 | 97.0% | 89.9% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.85 | 69.0 | 6.80e-01 | 98.5% | 81.7% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.85 | 77.0 | 6.52e-01 | 100.0% | 62.3% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 73.0 | 7.00e-01 | 98.5% | 83.8% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 72.0 | 7.35e-01 | 100.0% | 96.8% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.84 | 78.0 | 4.98e-01 | 100.0% | 24.7% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.83 | 71.0 | 7.19e-01 | 92.4% | 95.3% |
| 1xl3C00 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.83 | 68.0 | 6.00e-01 | 89.4% | 62.6% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.83 | 74.0 | 6.38e-01 | 100.0% | 85.3% |
| 1w9rA00 | 1.20.58.440 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › choline binding protein A | 0.82 | 73.0 | 5.94e-01 | 97.0% | 53.8% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.82 | 75.0 | 7.15e-01 | 100.0% | 85.7% |
| 3x29A00 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.82 | 74.0 | 5.45e-01 | 100.0% | 40.4% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.82 | 73.0 | 6.14e-01 | 100.0% | 60.9% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.82 | 74.0 | 5.94e-01 | 100.0% | 56.8% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.82 | 68.0 | 6.90e-01 | 89.4% | 96.9% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.82 | 58.0 | 6.54e-01 | 86.4% | 100.0% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 74.0 | 6.21e-01 | 100.0% | 65.4% |
| 1bhaA00 | 1.10.287.170 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.81 | 63.0 | 6.32e-01 | 83.3% | 82.1% |
| 3rauA00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.80 | 72.0 | 4.45e-01 | 100.0% | 18.2% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.80 | 71.0 | 4.95e-01 | 100.0% | 73.7% |
| 3t98B00 | 6.10.140.1350 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 73.0 | 6.61e-01 | 100.0% | 90.7% |
| 3g80A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.80 | 70.0 | 6.74e-01 | 95.5% | 91.8% |
| 3jcuZ00 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.79 | 67.0 | 6.95e-01 | 92.4% | 100.0% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 69.0 | 6.31e-01 | 98.5% | 93.2% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 68.0 | 6.01e-01 | 97.0% | 65.6% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 66.0 | 6.84e-01 | 93.9% | 100.0% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.79 | 71.0 | 5.92e-01 | 100.0% | 62.5% |
| 2wauA02 | 1.20.58.830 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 68.0 | 5.56e-01 | 97.0% | 58.2% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 67.0 | 5.40e-01 | 98.5% | 49.2% |
| 2p7vA00 | 1.20.120.1370 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulator of RNA polymerase sigma(70) subunit, domain 4 | 0.78 | 68.0 | 5.26e-01 | 100.0% | 43.7% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.78 | 62.0 | 6.58e-01 | 86.4% | 98.3% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.78 | 68.0 | 4.38e-01 | 100.0% | 21.4% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.77 | 67.0 | 5.50e-01 | 98.5% | 53.4% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 66.0 | 4.97e-01 | 100.0% | 39.3% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.76 | 67.0 | 6.30e-01 | 100.0% | 81.5% |
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 65.0 | 6.19e-01 | 98.5% | 83.7% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.76 | 57.0 | 5.78e-01 | 81.8% | 84.6% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.75 | 64.0 | 5.90e-01 | 98.5% | 74.4% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.75 | 68.0 | 4.86e-01 | 100.0% | 38.8% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 60.0 | 5.63e-01 | 89.4% | 72.8% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 63.0 | 5.73e-01 | 100.0% | 69.6% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.74 | 63.0 | 6.06e-01 | 98.5% | 84.6% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.74 | 67.0 | 5.62e-01 | 100.0% | 80.7% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.74 | 61.0 | 6.23e-01 | 95.5% | 100.0% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 65.0 | 5.86e-01 | 100.0% | 73.3% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.73 | 62.0 | 4.88e-01 | 92.4% | 63.9% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.72 | 66.0 | 5.39e-01 | 100.0% | 82.1% |
| 1t7sA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.72 | 61.0 | 5.02e-01 | 100.0% | 51.2% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 55.0 | 5.71e-01 | 92.4% | 98.3% |
| 1owaA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 60.0 | 5.24e-01 | 98.5% | 62.3% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 58.0 | 5.72e-01 | 93.9% | 88.7% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 57.0 | 4.42e-01 | 98.5% | 40.3% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 54.0 | 4.15e-01 | 86.4% | 42.3% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 57.0 | 5.75e-01 | 98.5% | 92.3% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 53.0 | 3.93e-01 | 87.9% | 31.7% |
| 3o39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 55.0 | 4.97e-01 | 100.0% | 66.7% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.66 | 53.0 | 5.20e-01 | 90.9% | 87.7% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 54.0 | 4.90e-01 | 98.5% | 66.3% |
| 3ccyA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 52.0 | 4.06e-01 | 92.4% | 41.5% |
| 2h7oA01 | 1.20.120.1330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Rac1-binding domain, N-terminal GTPase binding subdomain | 0.62 | 52.0 | 4.31e-01 | 95.5% | 79.7% |
| 3uarA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 49.0 | 4.23e-01 | 90.9% | 57.0% |
| 3h1nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 52.0 | 4.32e-01 | 98.5% | 56.7% |
| 2x6hA03 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.59 | 43.0 | 3.10e-01 | 83.3% | 26.0% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.58 | 50.0 | 3.12e-01 | 100.0% | 24.3% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 4.87e-01 | 90.9% | 98.4% |
| 5cqgA03 | 1.10.10.2210 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 37.0 | 3.51e-01 | 77.3% | 62.0% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033713 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.95 | 90.0 | 6.76e-01 | 100.0% | 47.1% |
| 3661101 | 3755.3.1.290 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PPI_helical | 0.93 | 87.0 | 6.39e-01 | 100.0% | 92.3% |
| 3702347 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.92 | 87.0 | 6.13e-01 | 100.0% | 53.7% |
| 3595968 | 605.2.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 | 0.92 | 81.0 | 7.55e-01 | 93.9% | 82.5% |
| 3504347 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.90 | 83.0 | 7.24e-01 | 98.5% | 68.4% |
| 3598168 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.90 | 84.0 | 6.08e-01 | 100.0% | 40.0% |
| 4468389 | 5086.1.1.101 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › SH3BP5 | 0.89 | 83.0 | 6.66e-01 | 100.0% | 55.0% |
| 4978412 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.89 | 71.0 | 5.08e-01 | 100.0% | 32.0% |
| 4408647 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.89 | 82.0 | 6.90e-01 | 100.0% | 62.9% |
| 3709390 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.89 | 82.0 | 6.77e-01 | 100.0% | 60.0% |
| 1034882 | 3567.1.1.2 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › GP41 | 0.89 | 81.0 | 7.52e-01 | 100.0% | 80.5% |
| 4969098 | 3926.1.1.0 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D | 0.88 | 81.0 | 5.81e-01 | 100.0% | 48.0% |
| 3976215 | 105.2.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C | 0.88 | 81.0 | 6.01e-01 | 100.0% | 42.6% |
| 3793885 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.87 | 81.0 | 6.12e-01 | 100.0% | 45.5% |
| 3176786 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.87 | 79.0 | 5.72e-01 | 100.0% | 37.7% |
| 4120495 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.87 | 80.0 | 4.80e-01 | 100.0% | 16.1% |
| 4362562 | 148.1.3.337 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF27734 | 0.87 | 79.0 | 5.48e-01 | 100.0% | 33.0% |
| 3184698 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.86 | 79.0 | 7.04e-01 | 100.0% | 77.8% |
| 3614230 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.86 | 79.0 | 4.83e-01 | 100.0% | 24.8% |
| 3890229 | 603.1.1.64 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › CUPID | 0.86 | 75.0 | 6.56e-01 | 93.9% | 69.5% |
| 3607086 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.86 | 74.0 | 6.92e-01 | 100.0% | 77.5% |
| 3249236 | 4207.1.2.93 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › RNA12 | 0.86 | 78.0 | 5.31e-01 | 100.0% | 36.7% |
| 4960548 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.85 | 77.0 | 5.55e-01 | 100.0% | 37.2% |
| 3780651 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.85 | 73.0 | 7.38e-01 | 92.4% | 95.4% |
| 3550353 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.85 | 74.0 | 7.47e-01 | 93.9% | 95.4% |
| 3303996 | 604.1.1.96 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Bap31 | 0.85 | 77.0 | 5.36e-01 | 100.0% | 33.2% |
| 3660496 | 604.3.1.19 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF3475 | 0.85 | 76.0 | 5.12e-01 | 97.0% | 30.2% |
| 2636645 | 192.15.1.2 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r | 0.85 | 72.0 | 7.24e-01 | 92.4% | 91.0% |
| 3670746 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.84 | 76.0 | 6.19e-01 | 100.0% | 55.8% |
| 5000508 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.84 | 76.0 | 5.92e-01 | 100.0% | 47.8% |
| 3237155 | 105.2.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C | 0.84 | 69.0 | 5.27e-01 | 100.0% | 40.7% |
| 3631342 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.83 | 76.0 | 6.46e-01 | 100.0% | 63.8% |
| 3807335 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.83 | 75.0 | 6.13e-01 | 100.0% | 56.7% |
| 3600361 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.83 | 71.0 | 6.26e-01 | 100.0% | 65.3% |
| 3392063 | 109.4.1.1677 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_M, HAT_Syf1_CNRKL1_N | 0.83 | 68.0 | 4.13e-01 | 89.4% | 15.1% |
| 3486312 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.82 | 74.0 | 6.04e-01 | 100.0% | 55.5% |
| 3476064 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.82 | 74.0 | 6.02e-01 | 100.0% | 55.0% |
| 3914846 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.81 | 72.0 | 5.62e-01 | 100.0% | 47.1% |
| 4463205 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.81 | 70.0 | 4.13e-01 | 97.0% | 13.1% |
| 4795626 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.80 | 69.0 | 4.47e-01 | 97.0% | 22.0% |
| 4649114 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.80 | 69.0 | 6.06e-01 | 98.5% | 69.0% |
| 3700089 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.79 | 62.0 | 6.32e-01 | 87.9% | 89.2% |
| 4042824 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.78 | 69.0 | 6.55e-01 | 100.0% | 83.7% |
| 3288903 | 150.8.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PPE | 0.78 | 69.0 | 5.10e-01 | 100.0% | 41.7% |
| 3506760 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.78 | 70.0 | 5.58e-01 | 100.0% | 89.2% |
| 4453591 | 3602.1.1.4 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › RRP36 | 0.78 | 68.0 | 5.37e-01 | 97.0% | 56.3% |
| 3788066 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.77 | 69.0 | 4.96e-01 | 100.0% | 38.4% |
| 3783055 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.77 | 68.0 | 5.78e-01 | 100.0% | 60.9% |
| 4106453 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.77 | 66.0 | 5.61e-01 | 100.0% | 59.0% |
| 3278215 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.77 | 68.0 | 6.31e-01 | 100.0% | 82.4% |
| 5061636 | 150.1.1.205 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Trp_dioxygenase | 0.76 | 61.0 | 5.66e-01 | 87.9% | 69.0% |
| 3608012 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.73 | 63.0 | 5.90e-01 | 100.0% | 77.6% |
| 3385727 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.72 | 62.0 | 4.20e-01 | 100.0% | 24.8% |
| 3911777 | 633.10.1.15 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 | 0.70 | 58.0 | 4.75e-01 | 97.0% | 48.1% |
| 3965811 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.66 | 55.0 | 4.81e-01 | 100.0% | 64.2% |