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OK896991.1__UDY80742.1__X__00073

Bact-Vir

OK896991.1__UDY80742.1__X__00073

Identity

Accession:
OK896991 ↗
Kingdom:
phage

Quality

93.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Geobacillus_phage_GR1

TaxID: 2890879

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-103
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02452.24 best PemK_toxin 51.5 1.50e-13 98.0% 83.5%
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ne8A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.89 84.0 7.91e-01 100.0% 91.4%
5hk0B00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.88 84.0 8.16e-01 100.0% 93.5%
5uctB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.85 78.0 7.83e-01 100.0% 96.0%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 43.0 5.54e-01 79.8% 84.7%
1ub4A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.84 75.0 7.45e-01 100.0% 91.3%
1m1fB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.83 79.0 7.73e-01 100.0% 96.2%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 41.0 5.69e-01 79.8% 100.0%
3jscA00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.81 70.0 7.15e-01 100.0% 94.8%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 42.0 5.41e-01 80.8% 89.3%
4rmoA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.81 75.0 6.37e-01 100.0% 83.1%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 39.0 4.97e-01 76.8% 79.7%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 41.0 5.50e-01 79.8% 98.1%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 38.0 4.19e-01 80.8% 60.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 41.0 5.08e-01 80.8% 87.1%
4glkA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.71 65.0 5.45e-01 100.0% 81.2%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 39.0 4.77e-01 78.8% 90.3%
1m4zA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.64 58.0 4.57e-01 99.0% 80.1%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.63 37.0 3.71e-01 81.8% 54.8%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.61 55.0 4.77e-01 97.0% 86.2%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.59 40.0 4.60e-01 80.8% 91.9%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.58 53.0 4.73e-01 98.0% 72.2%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.56 40.0 3.95e-01 81.8% 70.2%
1j09A02 1.10.1160.10 Mainly Alpha › Orthogonal Bundle › Glutamyl-tRNA Synthetase; domain 2 › Glutamyl-trna Synthetase; Domain 2 0.53 29.0 3.09e-01 100.0% 58.8%
2xu8A00 3.90.70.190 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Domain of unknown function (DUF5086) 0.52 39.0 3.78e-01 91.9% 69.0%
6b1pA03 1.10.1160.10 Mainly Alpha › Orthogonal Bundle › Glutamyl-tRNA Synthetase; domain 2 › Glutamyl-trna Synthetase; Domain 2 0.52 28.0 3.09e-01 81.8% 62.7%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1952922 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.91 86.0 8.33e-01 100.0% 93.6%
5045554 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.90 86.0 7.99e-01 100.0% 89.9%
4645229 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.89 85.0 8.16e-01 100.0% 93.6%
4667326 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.89 85.0 7.97e-01 100.0% 92.2%
1109151 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.89 84.0 7.82e-01 100.0% 89.2%
4950222 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.89 85.0 8.12e-01 100.0% 93.6%
5013823 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.88 83.0 7.42e-01 98.0% 96.2%
3951374 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.88 82.0 8.03e-01 99.0% 92.4%
4938225 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.88 84.0 8.21e-01 100.0% 96.2%
2643543 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.88 84.0 7.69e-01 100.0% 90.2%
5012680 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.88 84.0 8.03e-01 100.0% 95.5%
5027789 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.88 80.0 8.03e-01 100.0% 95.0%
4928262 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.88 84.0 8.03e-01 100.0% 95.5%
5062749 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.87 83.0 7.88e-01 100.0% 93.0%
5065801 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.87 83.0 8.15e-01 100.0% 95.2%
2125775 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.87 78.0 7.65e-01 100.0% 88.5%
3290144 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 67.0 7.47e-01 86.9% 98.8%
3587639 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.87 82.0 7.90e-01 99.0% 93.5%
3955085 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.86 79.0 7.93e-01 99.0% 96.0%
3965064 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.86 81.0 7.43e-01 100.0% 92.0%
4961922 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 81.0 7.85e-01 100.0% 93.6%
4267554 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.86 81.0 7.72e-01 100.0% 93.8%
3589640 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.86 80.0 7.67e-01 98.0% 92.7%
2046239 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.85 78.0 7.83e-01 100.0% 96.0%
2507392 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.85 80.0 7.67e-01 100.0% 87.5%
4969376 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.85 81.0 7.53e-01 100.0% 91.5%
3636066 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.85 80.0 6.64e-01 100.0% 89.4%
3964273 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.85 80.0 7.56e-01 100.0% 93.0%
3290347 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 76.0 7.65e-01 100.0% 94.9%
3728463 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.84 79.0 6.35e-01 99.0% 91.4%
3722930 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 79.0 6.29e-01 100.0% 78.9%
3691426 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.84 79.0 6.40e-01 100.0% 92.0%
3503901 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.84 80.0 7.43e-01 100.0% 89.8%
3959465 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.84 79.0 7.11e-01 100.0% 78.5%
3694663 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.84 78.0 6.40e-01 100.0% 92.9%
2702587 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.83 78.0 7.49e-01 100.0% 91.1%
4950603 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.83 79.0 7.45e-01 100.0% 90.4%
3955562 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.83 78.0 7.67e-01 100.0% 95.2%
4015851 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 78.0 6.47e-01 100.0% 95.6%
4016602 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.82 76.0 6.63e-01 99.0% 90.9%
3905549 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 44.0 4.33e-01 80.8% 50.5%
3955877 4.1.1.432 ↗ beta barrels › SH3 › SH3 › SH3 › PF27466 0.81 73.0 7.31e-01 100.0% 95.0%
4034169 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.80 75.0 6.53e-01 100.0% 74.3%
3502443 4.1.1.23 ↗ beta barrels › SH3 › SH3 › SH3 › CcdB 0.80 72.0 7.21e-01 99.0% 95.0%
3981828 4.1.1.23 ↗ beta barrels › SH3 › SH3 › SH3 › CcdB 0.78 73.0 7.22e-01 100.0% 95.2%
3741020 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 46.0 5.45e-01 91.9% 85.7%
3940730 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 41.0 4.22e-01 79.8% 56.8%
3823780 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.74 43.0 4.91e-01 80.8% 77.3%
3761319 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.73 44.0 5.33e-01 79.8% 92.3%
4026274 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 44.0 3.86e-01 80.8% 42.9%
3656401 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 43.0 4.93e-01 81.8% 85.3%
3926950 4.1.1.214 ↗ beta barrels › SH3 › SH3 › SH3 › GCN5L1 0.66 45.0 4.18e-01 74.7% 56.7%
608 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.63 37.0 3.71e-01 81.8% 54.8%
3408330 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 40.0 4.06e-01 86.9% 65.0%
3482360 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 44.0 4.61e-01 80.8% 81.1%
3582555 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 56.0 4.71e-01 100.0% 79.4%
3786396 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.60 43.0 4.01e-01 94.9% 57.7%
3688959 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.60 54.0 4.21e-01 99.0% 70.0%
3888395 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.59 42.0 4.59e-01 81.8% 86.9%
3551669 4.1.1.85 ↗ beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.59 55.0 4.77e-01 100.0% 71.7%
3738708 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 51.0 4.66e-01 99.0% 76.2%
572 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.56 40.0 3.95e-01 81.8% 70.2%
3581336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 49.0 4.74e-01 99.0% 90.9%
2541236 3820.1.1.0 ↗ a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain 0.54 39.0 3.98e-01 81.8% 78.1%
3481048 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 42.0 4.28e-01 86.9% 93.0%
4323235 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.52 39.0 3.85e-01 86.9% 73.6%