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OK913680.1__UEW68407.1__X__00024

Bact-Vir

OK913680.1__UEW68407.1__X__00024

Identity

Accession:
OK913680 ↗
Kingdom:
phage

Quality

78.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_MET23-P3

TaxID: 2894301

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-40
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xjyA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.58 42.0 3.60e-01 78.9% 82.5%
5fb0C01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.57 42.0 3.66e-01 81.6% 70.5%
2dloA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.55 40.0 3.21e-01 78.9% 61.7%
1p8dB00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.54 41.0 2.63e-01 94.7% 66.5%
1e7lA01 3.40.1800.10 Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases 0.51 38.0 3.18e-01 89.5% 63.7%
1wjpA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.51 35.0 3.74e-01 84.2% 87.1%
1wigA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.51 38.0 3.26e-01 92.1% 74.0%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4058778 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.81 73.0 4.17e-01 100.0% 14.6%
4418868 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.79 69.0 3.99e-01 100.0% 15.2%
4629018 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.79 69.0 3.99e-01 100.0% 13.9%
3651047 70.3.1.0 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like 0.77 65.0 4.34e-01 97.4% 26.7%
3196340 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.72 59.0 3.74e-01 100.0% 20.7%
3800970 377.9.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like 0.66 48.0 4.75e-01 78.9% 75.0%
3465422 4120.1.1.0 ↗ few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.64 55.0 3.81e-01 100.0% 75.0%
3276133 377.9.1.2 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-HIT 0.63 46.0 3.96e-01 78.9% 51.7%
3921605 377.9.1.9 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › MYND_ZMYND11_ZMYD8 0.59 49.0 3.52e-01 100.0% 31.3%
3408969 377.9.1.8 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS 0.56 47.0 3.90e-01 97.4% 72.9%
3891696 377.1.1.20 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Vps39_2 0.55 39.0 3.86e-01 76.3% 80.0%
3800676 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.55 37.0 2.88e-01 76.3% 28.6%
3825318 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.55 37.0 3.57e-01 71.1% 66.7%
3762358 376.1.1.19 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv 0.53 30.0 2.40e-01 89.5% 26.7%
3524547 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.52 44.0 3.90e-01 100.0% 85.0%
1660804 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.51 37.0 3.50e-01 84.2% 63.8%