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OL362274.1__URY99384.1__HC6_0038__00038

Bact-Vir

OL362274.1__URY99384.1__HC6_0038__00038

Identity

Accession:
OL362274 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Escherichia_phage_HC6

TaxID: 2912292

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-56
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 62.0 6.25e-01 87.0% 98.1%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 68.0 6.52e-01 100.0% 91.9%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 64.0 6.61e-01 94.4% 98.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 6.40e-01 98.1% 88.9%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.77 67.0 6.03e-01 100.0% 94.7%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 66.0 6.17e-01 98.1% 80.3%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 64.0 5.96e-01 100.0% 75.4%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 65.0 6.04e-01 98.1% 79.4%
3iutA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.74 63.0 4.25e-01 100.0% 40.9%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 62.0 6.05e-01 94.4% 91.5%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 62.0 6.07e-01 96.3% 90.0%
1b3qB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 55.0 5.12e-01 81.5% 95.6%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 61.0 5.75e-01 92.6% 83.1%
2fhdA02 2.30.30.810 Mainly Beta › Roll › SH3 type barrels. › 0.73 61.0 5.60e-01 94.4% 86.1%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 59.0 5.44e-01 90.7% 84.3%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 60.0 5.72e-01 96.3% 78.1%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 64.0 6.01e-01 100.0% 96.9%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.71 62.0 5.57e-01 100.0% 87.0%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 55.0 5.81e-01 92.6% 95.8%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 59.0 5.41e-01 94.4% 75.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 56.0 5.41e-01 88.9% 91.9%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 62.0 6.18e-01 100.0% 98.2%
2qvwD02 2.170.260.10 Mainly Beta › Beta Complex › paz domain › paz domain 0.69 58.0 4.74e-01 100.0% 96.4%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 57.0 5.04e-01 98.1% 74.7%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 53.0 4.71e-01 100.0% 77.9%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 44.0 4.23e-01 75.9% 74.2%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 52.0 4.54e-01 100.0% 72.5%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.62 48.0 3.79e-01 87.0% 71.3%
1vccA00 3.30.66.10 Alpha Beta › 2-Layer Sandwich › Viral Topoisomerase I › DNA topoisomerase I domain 0.60 46.0 4.10e-01 83.3% 90.9%
1z4vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 47.0 2.85e-01 94.4% 31.3%
2b3yA05 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.59 45.0 3.07e-01 87.0% 88.1%
4jivD00 2.60.200.60 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.59 49.0 4.20e-01 98.1% 90.3%
3nlcA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 41.0 2.74e-01 81.5% 70.0%
2uvaG09 2.40.128.700 Mainly Beta › Beta Barrel › Lipocalin › 0.56 44.0 3.67e-01 98.1% 87.1%
2f4qA01 3.30.66.10 Alpha Beta › 2-Layer Sandwich › Viral Topoisomerase I › DNA topoisomerase I domain 0.54 42.0 3.87e-01 87.0% 76.4%
2ox8A00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.54 44.0 3.49e-01 100.0% 78.3%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 47.0 3.35e-01 100.0% 45.8%
6qkgA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 46.0 3.67e-01 98.1% 97.3%
1kafA00 3.90.1150.20 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain 0.53 41.0 3.38e-01 88.9% 56.5%
4by2B00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.53 41.0 2.97e-01 85.2% 83.9%
2jh1A01 3.90.640.70 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.53 36.0 2.90e-01 92.6% 36.1%
4fk1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 41.0 3.37e-01 98.1% 95.5%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027422 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.84 72.0 7.23e-01 96.3% 90.9%
3924975 4.1.1.377 ↗ beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like 0.83 75.0 6.53e-01 100.0% 78.8%
3929373 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.82 73.0 7.02e-01 96.3% 96.7%
3342430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 72.0 6.43e-01 98.1% 74.7%
3166879 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.80 71.0 6.61e-01 96.3% 95.4%
3737837 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 69.0 6.46e-01 94.4% 96.9%
3329059 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.79 66.0 6.86e-01 90.7% 100.0%
3450200 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 70.0 5.98e-01 98.1% 64.7%
1031172 4.1.1.113 ↗ beta barrels › SH3 › SH3 › SH3 › TraI_2B 0.79 72.0 6.48e-01 100.0% 83.3%
3173941 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 69.0 5.59e-01 96.3% 52.0%
3928430 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.79 70.0 6.43e-01 98.1% 87.1%
3305577 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.78 67.0 6.66e-01 100.0% 92.7%
3558188 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.78 67.0 6.04e-01 98.1% 69.3%
2427475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 67.0 6.23e-01 96.3% 77.6%
3926118 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.77 69.0 6.72e-01 100.0% 100.0%
3954938 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 67.0 6.34e-01 100.0% 92.3%
3813762 4.25.1.2 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.76 67.0 6.28e-01 96.3% 100.0%
3507639 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.76 67.0 6.20e-01 100.0% 88.6%
3533770 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.76 68.0 5.43e-01 100.0% 52.4%
3824346 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 68.0 5.94e-01 100.0% 75.0%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.76 67.0 6.31e-01 98.1% 81.5%
4942163 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 64.0 6.10e-01 96.3% 81.5%
2727964 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.76 66.0 6.41e-01 98.1% 94.9%
3917372 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.75 68.0 6.05e-01 100.0% 74.7%
3737903 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.75 63.0 6.34e-01 96.3% 96.4%
3486496 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 65.0 6.56e-01 100.0% 98.2%
4161673 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.74 64.0 5.53e-01 98.1% 65.9%
3855038 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.74 64.0 4.56e-01 98.1% 35.0%
5053906 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.74 63.0 6.11e-01 96.3% 93.3%
5050320 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.74 65.0 5.82e-01 100.0% 84.0%
4121981 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.73 66.0 4.98e-01 100.0% 45.6%
4368811 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.73 60.0 5.97e-01 92.6% 89.1%
4929472 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 64.0 5.67e-01 100.0% 91.3%
4971470 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.73 64.0 5.76e-01 100.0% 82.7%
1175057 4.1.1.145 ↗ beta barrels › SH3 › SH3 › SH3 › Crb2_Tudor 0.73 61.0 5.23e-01 94.4% 70.5%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.72 63.0 5.72e-01 100.0% 89.3%
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.80e-01 88.9% 90.9%
3514191 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.17e-01 100.0% 54.0%
3732571 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 60.0 5.81e-01 92.6% 96.7%
3238405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 61.0 6.14e-01 96.3% 94.5%
4948433 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.71 62.0 5.78e-01 100.0% 92.6%
4944045 4.17.1.2 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase 0.71 62.0 5.73e-01 100.0% 90.0%
3171521 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.71 54.0 5.60e-01 81.5% 100.0%
3398496 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.71 60.0 6.03e-01 96.3% 94.5%
4505316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 60.0 5.89e-01 98.1% 95.0%
3660244 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.71 59.0 5.34e-01 94.4% 70.7%
3660755 4.8.1.21 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.69 59.0 5.36e-01 98.1% 73.3%
5081442 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.69 59.0 5.52e-01 100.0% 90.0%
3852545 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 60.0 5.88e-01 100.0% 90.0%
5056826 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 59.0 5.61e-01 100.0% 87.7%
3301383 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.68 56.0 5.76e-01 94.4% 100.0%
3936053 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.66 55.0 5.15e-01 98.1% 88.6%
1176176 818.1.1.2 ↗ a+b two layers › DNA topoisomerase I domain › DNA topoisomerase I domain › DNA topoisomerase I domain › Top1B_N_bact 0.54 42.0 3.98e-01 87.0% 83.3%