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OL436246.1__UGL60736.1__X__00082

Bact-Vir

OL436246.1__UGL60736.1__X__00082

Identity

Accession:
OL436246 ↗
Kingdom:
phage

Quality

86.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Silviavirus› Staphylococcus_phage_vB_SauM-HM01

TaxID: 2894347

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-92
PDB
Domain cluster: rep: OR354822.1__WNM50882.1__Alsa3_CDS0013__00013__D5-80
D2 medium residues 96-151
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 44.0 3.38e-01 76.8% 69.0%
4zyaB00 3.30.1910.20 Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain 0.60 41.0 3.78e-01 71.4% 52.6%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 42.0 3.26e-01 78.6% 69.2%
2jiiA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.57 46.0 3.17e-01 89.3% 58.0%
4guzA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.56 44.0 3.14e-01 87.5% 50.8%
4uijA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.56 45.0 3.74e-01 91.1% 67.3%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 38.0 3.26e-01 71.4% 64.9%
4n4nB00 3.90.640.100 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.55 37.0 3.77e-01 73.2% 98.2%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 41.0 3.11e-01 87.5% 71.5%
1e43A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 36.0 2.35e-01 73.2% 99.7%
5kd5A01 1.10.390.30 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Peptidase M60, enhancin-like domain 3 0.52 41.0 2.94e-01 89.3% 39.7%
1vx7000 2.30.170.20 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 0.50 28.0 2.76e-01 82.1% 46.8%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3974474 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.71 50.0 4.25e-01 73.2% 50.0%
3970671 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.67 47.0 4.26e-01 73.2% 65.3%
3254436 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.64 47.0 4.77e-01 78.6% 90.9%
3918338 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 43.0 3.18e-01 73.2% 43.2%
3886750 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.61 48.0 4.61e-01 83.9% 93.7%
4043462 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.61 42.0 3.34e-01 73.2% 90.8%
3630462 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 41.0 3.09e-01 73.2% 46.4%
3412689 101.1.2.281 ↗ alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.58 41.0 3.30e-01 76.8% 62.5%
3711220 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.57 45.0 4.34e-01 89.3% 90.8%
3254634 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.56 44.0 4.10e-01 91.1% 86.7%
4025072 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.55 38.0 3.09e-01 73.2% 56.5%
5013151 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.55 41.0 2.51e-01 83.9% 42.3%
3273259 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.54 41.0 2.78e-01 85.7% 86.9%
3579929 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.54 40.0 2.81e-01 85.7% 47.0%
3211575 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.53 36.0 2.74e-01 71.4% 54.5%
5029501 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.25e-01 91.1% 55.0%
3508249 189.1.1.2 ↗ alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP 0.53 38.0 2.69e-01 80.4% 94.6%
3853513 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.53 37.0 2.36e-01 73.2% 63.9%
4932931 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.53 39.0 3.16e-01 80.4% 48.2%
3627398 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.52 39.0 2.53e-01 85.7% 30.6%
4558880 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.52 40.0 2.45e-01 89.3% 36.9%
3267998 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 35.0 2.29e-01 71.4% 25.1%
3819120 101.1.2.120 ↗ alpha arrays › HTH › HTH › winged helix domain › DDRGK 0.51 38.0 3.13e-01 80.4% 47.6%