←Back to structures
OL436246.1__UGL60842.1__X__00188
Bact-VirOL436246.1__UGL60842.1__X__00188
Identity
- Accession:
- OL436246 ↗
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Silviavirus›
Staphylococcus_phage_vB_SauM-HM01
TaxID: 2894347
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-64
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.63 | 54.0 | 4.93e-01 | 100.0% | 83.7% |
| 3isxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.61 | 51.0 | 4.53e-01 | 100.0% | 96.6% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.61 | 49.0 | 4.46e-01 | 89.5% | 84.4% |
| 3qtgA02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.60 | 50.0 | 4.36e-01 | 100.0% | 89.4% |
| 1bliA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 48.0 | 4.25e-01 | 94.7% | 83.9% |
| 1r5bA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 47.0 | 4.18e-01 | 100.0% | 88.8% |
| 3kl9A02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.55 | 43.0 | 4.09e-01 | 93.0% | 97.3% |
| 4mboA01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 44.0 | 3.45e-01 | 100.0% | 50.3% |
| 2cg7A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.54 | 36.0 | 3.95e-01 | 80.7% | 87.0% |
| 4j5tA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.54 | 39.0 | 2.31e-01 | 96.5% | 9.4% |
| 4oonA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 45.0 | 3.76e-01 | 100.0% | 75.0% |
| 4zi8B01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.53 | 43.0 | 3.69e-01 | 100.0% | 73.8% |
| 1ljoA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.50e-01 | 78.9% | 94.7% |
| 3biqA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.52 | 38.0 | 2.55e-01 | 84.2% | 47.4% |
| 3bn8A00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.51 | 42.0 | 3.48e-01 | 100.0% | 68.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033574 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.94 | 87.0 | 8.52e-01 | 100.0% | 93.3% |
| 4032177 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.92 | 83.0 | 8.18e-01 | 100.0% | 91.7% |
| 3723630 | 12.1.1.10 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amy_C_pro | 0.56 | 47.0 | 3.99e-01 | 100.0% | 85.7% |
| 41789 | 12.1.1.10 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amy_C_pro | 0.56 | 48.0 | 4.23e-01 | 100.0% | 66.7% |
| 5039219 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.51 | 39.0 | 3.18e-01 | 89.5% | 78.4% |
| 3606615 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.50 | 33.0 | 3.00e-01 | 70.2% | 94.4% |