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OL436246.1__UGL60844.1__X__00190

Bact-Vir

OL436246.1__UGL60844.1__X__00190

Identity

Accession:
OL436246 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Silviavirus› Staphylococcus_phage_vB_SauM-HM01

TaxID: 2894347

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-135
PDB
Domain cluster: rep: HM004124.1__ADG59954.1__Acj9p054__00054__D4-153
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y0hB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 30.0 3.43e-01 80.8% 56.1%
4pbdA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 37.0 4.15e-01 90.0% 74.5%
2k8qA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 37.0 3.69e-01 90.0% 59.0%
1t7vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 31.0 3.64e-01 88.5% 71.1%
2mnjB00 2.60.40.4160 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 35.0 4.21e-01 87.7% 89.8%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 44.0 4.66e-01 100.0% 90.6%
1sq2N00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 31.0 3.35e-01 88.5% 62.5%
5c94A00 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.56 35.0 3.68e-01 100.0% 69.0%
1x8dA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 27.0 3.07e-01 80.8% 58.8%
4pjeE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 33.0 3.62e-01 86.9% 72.2%
1y12B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.54 47.0 4.39e-01 100.0% 77.6%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.53 38.0 4.27e-01 99.2% 99.0%
3es6B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 29.0 3.05e-01 88.5% 56.8%
1r0aH01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 33.0 3.47e-01 89.2% 67.5%
1x5mA01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 33.0 3.68e-01 90.8% 78.3%
1hxmB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 32.0 3.33e-01 89.2% 66.4%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3520265 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.84 80.0 7.68e-01 100.0% 91.0%
5082881 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 52.0 5.30e-01 100.0% 94.4%
4558868 319.1.1.14 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HECT_2 0.60 36.0 4.15e-01 88.5% 81.1%
3416239 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.60 32.0 3.98e-01 85.4% 83.1%
4643746 12.1.1.5 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amyl_C2 0.59 27.0 3.56e-01 99.2% 78.6%
4514734 1.1.13.42 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Tail_tube 0.58 44.0 4.69e-01 100.0% 92.7%
2595159 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.58 52.0 4.81e-01 100.0% 75.9%
4141801 56.1.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.57 30.0 3.52e-01 100.0% 74.1%
149114 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.55 33.0 3.56e-01 86.9% 70.9%
4873215 1.1.13.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 0.53 46.0 4.48e-01 100.0% 85.0%
3928143 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.53 33.0 3.70e-01 90.0% 78.1%
3943681 1.1.13.47 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.53 49.0 4.66e-01 100.0% 95.3%
163527 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.53 32.0 3.48e-01 86.9% 71.6%
3580020 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.52 48.0 4.18e-01 100.0% 80.0%
189874 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.52 33.0 3.39e-01 90.8% 65.4%
3855090 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 33.0 3.21e-01 90.8% 56.0%
4000485 319.1.1.20 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › SF3A2 0.51 35.0 3.77e-01 89.2% 80.9%
4029597 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.51 33.0 3.17e-01 90.8% 56.0%
5023445 289.1.1.2 ↗ a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Zn_protease 0.51 37.0 3.63e-01 75.4% 79.3%
3287203 319.1.1.16 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF26059 0.50 31.0 3.84e-01 99.2% 100.0%
1643 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.50 32.0 3.33e-01 89.2% 67.5%
2097771 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.50 46.0 4.21e-01 100.0% 84.1%
D2 high residues 162-242
PDB
Domain cluster: rep: SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00209__D47-143
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF01503.23 best PRA-PH 23.4 8.80e-05 91.4% 63.9%
PF03819.23 MazG 24.4 4.10e-05 71.6% 64.9%