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OL473597.1__UNH61309.1__SSZBM1_192__00192
Bact-VirOL473597.1__UNH61309.1__SSZBM1_192__00192
Identity
- Accession:
- OL473597 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Shenzhenivirus›
Synechococcus_phage_S-SZBM1
TaxID: 2926475
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-37
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jeyB03 | 1.10.1600.10 | Mainly Alpha › Orthogonal Bundle › Ku70; Chain: A; domain 4 › | 0.67 | 40.0 | 2.80e-01 | 91.2% | 18.6% |
| 1olzA02 | 3.30.1680.10 | Alpha Beta › 2-Layer Sandwich › ligand-binding face of the semaphorins, domain 2 › ligand-binding face of the semaphorins, domain 2 | 0.66 | 46.0 | 3.94e-01 | 73.5% | 56.1% |
| 3okyB02 | 3.30.1680.10 | Alpha Beta › 2-Layer Sandwich › ligand-binding face of the semaphorins, domain 2 › ligand-binding face of the semaphorins, domain 2 | 0.64 | 44.0 | 3.91e-01 | 73.5% | 51.9% |
| 3f1sB01 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.64 | 43.0 | 3.86e-01 | 85.3% | 47.1% |
| 3k9xC02 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.62 | 42.0 | 3.94e-01 | 79.4% | 52.3% |
| 3v64C01 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.62 | 43.0 | 4.42e-01 | 79.4% | 74.2% |
| 1dvaL02 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.60 | 41.0 | 3.58e-01 | 82.4% | 40.4% |
| 2eqpA00 | 4.10.400.20 | Few Secondary Structures › Irregular › Low-density Lipoprotein Receptor › | 0.60 | 45.0 | 3.98e-01 | 82.4% | 78.0% |
| 7zj3D01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 33.0 | 2.61e-01 | 73.5% | 23.5% |
| 5wvdB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.56 | 43.0 | 3.05e-01 | 91.2% | 49.2% |
| 1kmxA00 | 2.10.160.10 | Mainly Beta › Ribbon › Vascular Endothelial Growth Factor-165, Heparin-binding Domain › Vascular endothelial growth factor, heparin-binding domain | 0.56 | 43.0 | 3.87e-01 | 94.1% | 67.3% |
| 4bgdA08 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 39.0 | 2.52e-01 | 73.5% | 73.4% |
| 1w1wA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 40.0 | 2.46e-01 | 88.2% | 11.3% |
| 2gfoA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 39.0 | 2.28e-01 | 76.5% | 37.8% |
| 2pvjA01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.55 | 41.0 | 2.61e-01 | 100.0% | 27.5% |
| 4ianA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.55 | 42.0 | 2.71e-01 | 100.0% | 30.2% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 3.52e-01 | 79.4% | 58.8% |
| 3ptaA04 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.55 | 42.0 | 2.78e-01 | 97.1% | 43.5% |
| 4fleA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 38.0 | 2.44e-01 | 76.5% | 90.3% |
| 2felA00 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.53 | 36.0 | 2.17e-01 | 73.5% | 26.1% |
| 3ol2B02 | 3.30.1680.10 | Alpha Beta › 2-Layer Sandwich › ligand-binding face of the semaphorins, domain 2 › ligand-binding face of the semaphorins, domain 2 | 0.53 | 38.0 | 3.58e-01 | 73.5% | 54.2% |
| 2q07A02 | 3.10.450.90 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain | 0.53 | 39.0 | 3.44e-01 | 94.1% | 98.5% |
| 4pwnA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 41.0 | 2.73e-01 | 91.2% | 35.3% |
| 2oap202 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 36.0 | 2.25e-01 | 85.3% | 24.9% |
| 1k74D00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.53 | 38.0 | 2.41e-01 | 100.0% | 50.4% |
| 6iy9A01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.52 | 39.0 | 2.59e-01 | 100.0% | 54.5% |
| 6qv3A05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 2.84e-01 | 82.4% | 32.3% |
| 1iq8A03 | 3.10.450.90 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain | 0.51 | 36.0 | 2.87e-01 | 76.5% | 90.5% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4058312 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.73 | 51.0 | 5.26e-01 | 79.4% | 83.3% |
| 3882065 | 389.4.1.3 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › EGF_CA | 0.72 | 57.0 | 4.69e-01 | 100.0% | 47.7% |
| 3267197 | 387.1.3.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like | 0.71 | 49.0 | 5.14e-01 | 73.5% | 86.7% |
| 4486619 | 389.6.1.2 ↗ | few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain › Furin-like | 0.69 | 52.0 | 3.42e-01 | 85.3% | 22.0% |
| 3405285 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.68 | 51.0 | 3.88e-01 | 82.4% | 62.5% |
| 3749249 | 389.6.1.15 ↗ | few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain › GF_recep_IV, Furin-like_2 | 0.67 | 57.0 | 3.08e-01 | 94.1% | 7.1% |
| 3546357 | 389.6.1.0 ↗ | few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain | 0.67 | 53.0 | 4.14e-01 | 94.1% | 71.2% |
| 3797529 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.66 | 52.0 | 3.57e-01 | 97.1% | 45.9% |
| 4941456 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.66 | 53.0 | 4.63e-01 | 94.1% | 98.2% |
| 3196924 | 389.1.1.134 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › DUF7707 | 0.65 | 47.0 | 3.64e-01 | 82.4% | 43.5% |
| 3250433 | 387.1.3.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like | 0.64 | 48.0 | 4.99e-01 | 88.2% | 96.7% |
| 3490940 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.63 | 49.0 | 3.41e-01 | 97.1% | 47.1% |
| 4663617 | 387.1.1.12 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › Toxin_11 | 0.63 | 44.0 | 4.60e-01 | 76.5% | 82.1% |
| 4323349 | 389.6.1.0 ↗ | few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain | 0.63 | 49.0 | 3.92e-01 | 88.2% | 52.0% |
| 3480553 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.63 | 49.0 | 3.40e-01 | 97.1% | 47.1% |
| 4843538 | 389.1.1.97 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › cEGF, FXa_inhibition | 0.63 | 43.0 | 3.89e-01 | 85.3% | 48.1% |
| 3569092 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.61 | 52.0 | 3.48e-01 | 94.1% | 49.3% |
| 3495366 | 355.1.1.0 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like | 0.61 | 46.0 | 4.51e-01 | 94.1% | 75.0% |
| 3920074 | 389.6.1.0 ↗ | few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain | 0.60 | 44.0 | 3.44e-01 | 94.1% | 73.0% |
| 3908230 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 46.0 | 2.50e-01 | 94.1% | 22.3% |
| 4004108 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.58 | 40.0 | 2.46e-01 | 76.5% | 11.2% |
| 4053917 | 304.20.1.5 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f | 0.57 | 39.0 | 2.47e-01 | 76.5% | 16.5% |
| 3824811 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.56 | 40.0 | 2.76e-01 | 88.2% | 54.8% |
| 3469812 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.56 | 42.0 | 2.52e-01 | 100.0% | 36.1% |
| 3300222 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 41.0 | 2.47e-01 | 100.0% | 20.0% |
| 3402529 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.55 | 38.0 | 2.21e-01 | 73.5% | 10.1% |
| 4968811 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.54 | 42.0 | 3.67e-01 | 88.2% | 56.4% |
| 3626646 | 5001.1.1.60 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srx | 0.54 | 40.0 | 2.60e-01 | 94.1% | 81.5% |
| 4964007 | 205.1.1.20 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 | 0.54 | 38.0 | 2.94e-01 | 73.5% | 29.4% |
| 3540435 | 386.1.1.69 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › AKAP95 | 0.54 | 35.0 | 3.14e-01 | 85.3% | 46.0% |
| 2542985 | 5069.1.1.3 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_I | 0.54 | 39.0 | 2.51e-01 | 82.4% | 56.2% |
| 3267451 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.53 | 37.0 | 2.18e-01 | 73.5% | 50.3% |
| 4228064 | 386.1.1.244 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-met | 0.53 | 36.0 | 2.85e-01 | 70.6% | 45.9% |
| 3561488 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.53 | 36.0 | 2.13e-01 | 73.5% | 48.2% |
| 3338778 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.53 | 42.0 | 2.56e-01 | 91.2% | 40.8% |
| 3186533 | 389.1.1.134 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › DUF7707 | 0.52 | 37.0 | 3.02e-01 | 85.3% | 47.1% |
| 3204763 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.52 | 44.0 | 2.64e-01 | 91.2% | 14.5% |
| 3584552 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.52 | 37.0 | 2.14e-01 | 85.3% | 15.7% |
| 3631215 | 316.1.1.14 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD | 0.52 | 40.0 | 2.56e-01 | 88.2% | 84.0% |
| 3929740 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 38.0 | 2.29e-01 | 100.0% | 29.7% |
| 3801001 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 37.0 | 2.48e-01 | 76.5% | 18.6% |
| 1515934 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 36.0 | 2.10e-01 | 73.5% | 48.0% |
| 3677582 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.51 | 38.0 | 2.32e-01 | 73.5% | 84.5% |
| 3738893 | 3343.1.1.0 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) | 0.51 | 40.0 | 2.24e-01 | 94.1% | 24.3% |
| 3594696 | 3687.1.1.0 ↗ | alpha bundles › NADPH-cytochrome p450 reductase helical insertion domain › NADPH-cytochrome p450 reductase helical insertion domain › NADPH-cytochrome p450 reductase helical insertion domain | 0.51 | 35.0 | 2.40e-01 | 73.5% | 41.4% |
| 4030687 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 34.0 | 2.79e-01 | 88.2% | 31.1% |
| 3585021 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.50 | 38.0 | 2.05e-01 | 100.0% | 35.5% |
| 4037084 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 44.0 | 3.17e-01 | 100.0% | 41.0% |
| 3273259 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.50 | 39.0 | 2.38e-01 | 91.2% | 84.9% |