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OL539462.1__UGO53614.1__BLUESHADOW_73__00073

Bact-Vir

OL539462.1__UGO53614.1__BLUESHADOW_73__00073

Identity

Accession:
OL539462 ↗
Kingdom:
phage

Quality

76.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-67
PDB
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3s40A02 2.60.200.40 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.73 56.0 4.51e-01 84.8% 65.7%
4werA02 2.60.200.40 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.72 58.0 4.46e-01 89.4% 60.1%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.71 47.0 4.08e-01 89.4% 45.9%
5exvC00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.68 52.0 3.86e-01 81.8% 70.3%
2oviA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.67 52.0 3.97e-01 84.8% 74.7%
2cofA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 46.0 3.97e-01 72.7% 85.0%
3fewX02 3.30.1310.40 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › 0.66 39.0 3.42e-01 83.3% 38.9%
5c71A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 47.0 4.11e-01 74.2% 95.8%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.63 45.0 3.92e-01 75.8% 93.3%
3ll3B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 50.0 3.28e-01 83.3% 91.8%
1jlcB03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.63 42.0 3.26e-01 84.8% 33.8%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 48.0 4.09e-01 84.8% 75.0%
6focH01 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.61 45.0 3.97e-01 80.3% 70.5%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 45.0 4.57e-01 77.3% 86.4%
1lxmA04 2.60.40.1380 Mainly Beta › Sandwich › Immunoglobulin-like › E set domains; domain 4 0.61 42.0 4.06e-01 71.2% 85.5%
2ap1A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 48.0 3.70e-01 83.3% 42.4%
1z05A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 47.0 3.54e-01 84.8% 66.9%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 43.0 3.49e-01 75.8% 82.4%
5nckA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 44.0 3.77e-01 84.8% 50.5%
2zgoA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 47.0 3.56e-01 89.4% 68.3%
3fvcA03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.59 43.0 3.67e-01 78.8% 89.1%
2w40A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 45.0 3.00e-01 83.3% 92.5%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 42.0 4.12e-01 77.3% 79.2%
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 46.0 3.87e-01 84.8% 73.1%
2f9wA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 46.0 3.60e-01 84.8% 55.7%
3htvA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 45.0 3.76e-01 83.3% 92.8%
2hjjA00 3.30.160.130 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains 0.58 40.0 4.07e-01 72.7% 97.0%
3r8eA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 43.0 3.36e-01 84.8% 37.9%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.58 39.0 3.91e-01 71.2% 87.1%
1f53A00 2.60.20.30 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › 0.57 31.0 2.94e-01 83.3% 40.5%
1bu6O01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 45.0 3.01e-01 86.4% 93.6%
1c7sA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 39.0 3.92e-01 72.7% 100.0%
2wkkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 3.52e-01 92.4% 65.3%
5dn6I00 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.55 38.0 3.69e-01 72.7% 89.3%
1xc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 43.0 3.70e-01 84.8% 92.2%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.55 42.0 3.19e-01 86.4% 66.3%
4ehoB03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.54 40.0 2.94e-01 78.8% 83.8%
2yhwA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 44.0 3.37e-01 87.9% 73.1%
4bv4R00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.54 37.0 2.23e-01 71.2% 15.5%
4ok4A02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 41.0 2.68e-01 87.9% 41.6%
4v19S00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.53 45.0 3.50e-01 93.9% 79.0%
4e6xB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 38.0 2.52e-01 75.8% 94.7%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 40.0 3.31e-01 97.0% 44.4%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.87e-01 80.3% 96.9%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 40.0 3.13e-01 92.4% 38.5%
2r0xA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 40.0 3.05e-01 89.4% 35.3%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.69e-01 84.8% 68.8%
3pftA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 40.0 3.03e-01 83.3% 75.6%
3hmzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 40.0 2.90e-01 92.4% 29.3%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 40.0 3.47e-01 92.4% 81.7%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.51 36.0 2.61e-01 75.8% 80.2%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.51 37.0 3.30e-01 80.3% 52.9%
2qggA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.51 37.0 3.31e-01 84.8% 54.8%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 41.0 2.96e-01 98.5% 30.0%
2yvlA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.50 38.0 4.01e-01 84.8% 91.4%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1513168 809.1.1.4 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › DUF4309 0.78 44.0 4.43e-01 71.2% 55.2%
5065208 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 40.0 4.39e-01 77.3% 61.8%
3510425 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.75 55.0 4.14e-01 75.8% 71.6%
5051542 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.74 42.0 2.97e-01 83.3% 19.5%
3281300 4.1.1.426 beta barrels › SH3 › SH3 › SH3 › PF31188 0.73 53.0 5.35e-01 77.3% 93.8%
3482713 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 50.0 4.00e-01 75.8% 80.0%
4963443 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.71 52.0 4.56e-01 77.3% 82.1%
4380236 4216.1.1.2 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX 0.68 52.0 3.79e-01 81.8% 65.5%
3967527 4216.1.1.1 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS 0.68 51.0 3.77e-01 80.3% 69.2%
5037626 5.1.10.18 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › FG-GAP_3 0.68 48.0 4.39e-01 84.8% 57.6%
5082492 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 50.0 4.60e-01 78.8% 70.6%
2663669 4216.1.1.2 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX 0.68 53.0 3.99e-01 84.8% 75.6%
4991564 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 53.0 4.05e-01 86.4% 57.4%
3976197 241.13.1.1 a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › Sif 0.67 47.0 3.91e-01 74.2% 100.0%
3199763 220.1.1.202 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N 0.65 45.0 3.68e-01 72.7% 72.8%
7765 4216.1.1.2 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX 0.65 50.0 4.11e-01 84.8% 93.7%
3602511 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 45.0 4.51e-01 84.8% 71.4%
3244161 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.64 44.0 4.31e-01 71.2% 91.4%
3991097 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 43.0 3.57e-01 72.7% 88.8%
4155945 56.1.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.62 48.0 4.51e-01 86.4% 88.2%
3706065 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 46.0 3.74e-01 80.3% 73.8%
3242544 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 42.0 3.48e-01 71.2% 80.8%
3917937 220.1.1.173 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERK 0.62 46.0 3.80e-01 78.8% 74.8%
4124524 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.62 49.0 3.47e-01 100.0% 28.3%
3575357 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 48.0 3.13e-01 92.4% 81.8%
3273672 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 41.0 3.21e-01 72.7% 64.7%
3471318 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 46.0 4.04e-01 84.8% 71.0%
4188272 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.59 46.0 3.47e-01 84.8% 91.2%
3882269 220.1.1.25 beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.59 47.0 3.95e-01 84.8% 77.1%
4302391 4.1.1.398 beta barrels › SH3 › SH3 › SH3 › YolD 0.57 39.0 4.02e-01 74.2% 73.8%
3721787 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 41.0 3.90e-01 80.3% 76.5%
3953943 9.27.1.1 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa 0.57 43.0 3.63e-01 80.3% 99.1%
3302412 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 41.0 2.64e-01 75.8% 29.3%
4069560 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 41.0 4.02e-01 78.8% 78.7%
3651687 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 46.0 3.16e-01 87.9% 90.5%
4110965 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.56 47.0 3.62e-01 90.9% 60.7%
5081442 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.55 40.0 3.94e-01 84.8% 72.9%
5066224 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.54 42.0 3.85e-01 86.4% 83.3%
4031510 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 39.0 3.65e-01 84.8% 58.9%
3581906 2003.1.5.19 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.54 46.0 2.78e-01 100.0% 19.2%
3184235 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.54 39.0 3.12e-01 80.3% 39.3%
4034320 4.1.1.398 beta barrels › SH3 › SH3 › SH3 › YolD 0.54 38.0 3.78e-01 84.8% 75.0%
3995015 5.1.4.241 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › eIF2A 0.53 46.0 3.09e-01 97.0% 51.5%
3947700 4.8.1.25 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DSRB 0.53 39.0 4.00e-01 80.3% 90.5%
4183853 4.1.1.435 beta barrels › SH3 › SH3 › SH3 › PF29216 0.53 40.0 4.02e-01 84.8% 80.0%
4017407 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.53 37.0 3.70e-01 74.2% 74.3%
4944045 4.17.1.2 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase 0.53 37.0 3.73e-01 80.3% 71.4%
None 0.53 45.0 2.87e-01 100.0% 24.5%
4948433 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.53 38.0 3.77e-01 84.8% 75.0%
5056826 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.52 39.0 3.99e-01 84.8% 81.5%
4971665 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.52 44.0 3.21e-01 92.4% 36.0%
162092 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.52 40.0 3.21e-01 92.4% 42.0%
4565837 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.52 41.0 3.70e-01 89.4% 81.1%
3588663 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.52 41.0 3.64e-01 86.4% 82.1%
3511375 4.1.1.349 beta barrels › SH3 › SH3 › SH3 › ROF 0.52 40.0 3.74e-01 89.4% 65.9%
3469125 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.51 45.0 3.64e-01 100.0% 65.4%
3286662 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.51 37.0 3.35e-01 84.8% 53.0%
632 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.51 36.0 3.42e-01 81.8% 59.3%
3740221 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.51 40.0 3.12e-01 89.4% 64.4%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.51 37.0 3.62e-01 84.8% 70.7%
5032454 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.51 39.0 3.29e-01 89.4% 66.2%
3978997 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.51 37.0 3.45e-01 84.8% 58.9%
3690811 220.1.1.67 beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.50 39.0 3.45e-01 84.8% 76.0%
3283097 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.50 37.0 3.30e-01 84.8% 51.8%