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OL539468.1__UGO54127.1__HAYMO_145__00145
Bact-VirOL539468.1__UGO54127.1__HAYMO_145__00145
Identity
- Accession:
- OL539468 ↗
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Moabitevirus›
Serratia_phage_vB_SmaM_Haymo
TaxID: 2902685
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-135
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3r5dA01 | 3.30.70.2010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.79 | 54.0 | 5.42e-01 | 100.0% | 68.2% |
| 2rijA01 | 3.30.70.2010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 54.0 | 4.94e-01 | 100.0% | 62.0% |
| 1rylA00 | 3.40.1760.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family | 0.65 | 60.0 | 5.56e-01 | 100.0% | 99.4% |
| 3w1oA00 | 3.40.1760.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › | 0.61 | 51.0 | 5.38e-01 | 99.2% | 99.1% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 25.0 | 3.23e-01 | 93.7% | 79.0% |
| 5hayA02 | 1.25.40.440 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Nucleoporin, helical domain, central subdomain | 0.54 | 33.0 | 3.99e-01 | 92.1% | 98.7% |
| 3bkxA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 42.0 | 3.39e-01 | 87.4% | 86.4% |
| 4yzgA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.53 | 41.0 | 3.22e-01 | 85.0% | 64.6% |
| 8p2aA01 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.52 | 30.0 | 3.53e-01 | 89.8% | 81.6% |
| 6ks6Z01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.51 | 44.0 | 3.50e-01 | 96.1% | 83.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5042700 | 618.1.1.0 ↗ | a+b complex topology › DNA mimic protein DMP12-like › DNA mimic protein DMP12-related › DNA mimic protein DMP12-related | 0.68 | 50.0 | 5.52e-01 | 100.0% | 98.0% |
| 4927922 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.61 | 30.0 | 4.31e-01 | 71.7% | 100.0% |
| 4015095 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.61 | 40.0 | 3.84e-01 | 89.8% | 56.6% |
| 3283906 | 618.1.1.3 ↗ | a+b complex topology › DNA mimic protein DMP12-like › DNA mimic protein DMP12-related › DNA mimic protein DMP12-related › DUF7691 | 0.59 | 53.0 | 5.08e-01 | 100.0% | 98.0% |
| 4106399 | 10.12.1.107 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF27522 | 0.57 | 36.0 | 3.43e-01 | 100.0% | 53.8% |
| 3267438 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.56 | 45.0 | 4.37e-01 | 86.6% | 95.2% |
| 5028083 | 10.28.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 | 0.51 | 36.0 | 3.69e-01 | 96.9% | 73.6% |
| 3273448 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.51 | 44.0 | 3.59e-01 | 96.9% | 87.9% |
| 4024451 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 43.0 | 3.53e-01 | 92.1% | 52.9% |