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OL539469.1__UGO54360.1__BROOKERS_56__00056

Bact-Vir

OL539469.1__UGO54360.1__BROOKERS_56__00056

Identity

Accession:
OL539469 ↗
Kingdom:
phage

Quality

93.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lederbergvirus› Proteus_phage_vB_PmiP_Brookers

TaxID: 2902683

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-90
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3le4A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.67 28.0 3.50e-01 73.0% 60.0%
1vhnA02 1.10.1200.80 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 0.60 29.0 3.18e-01 78.7% 53.5%
3kl0A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 35.0 2.47e-01 77.5% 18.0%
2ymsB00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.57 34.0 3.74e-01 95.5% 73.0%
2hjjA00 3.30.160.130 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains 0.55 28.0 3.16e-01 77.5% 63.6%
2g18I00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.55 40.0 3.02e-01 78.7% 52.9%
2ymsA00 2.40.128.630 Mainly Beta › Beta Barrel › Lipocalin › 0.54 35.0 3.11e-01 94.4% 47.6%
1pg2A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 45.0 3.08e-01 95.5% 62.0%
3fcdB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 32.0 2.95e-01 80.9% 44.5%
3mcbB00 2.20.70.30 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain 0.51 31.0 3.67e-01 80.9% 91.4%
3f2bA05 6.10.50.10 Special › Helix non-globular › Insulin-like, subunit E › 0.51 28.0 3.34e-01 75.3% 89.6%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3916252 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.63 33.0 3.14e-01 83.1% 41.9%
3393888 304.111.1.1 ↗ a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C 0.60 43.0 3.20e-01 75.3% 96.8%
5057751 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.58 42.0 4.37e-01 91.0% 81.2%
4944224 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.57 40.0 3.08e-01 74.2% 67.4%
3577230 604.1.1.5 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_3 0.54 39.0 3.78e-01 88.8% 64.8%
5028317 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.53 38.0 4.00e-01 91.0% 83.7%
4955157 304.139.1.2 ↗ a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs 0.52 41.0 2.93e-01 92.1% 27.1%
3274156 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.52 46.0 2.98e-01 100.0% 48.1%
3518809 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 34.0 2.47e-01 80.9% 22.2%
3177293 241.6.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits 0.51 37.0 3.41e-01 78.7% 80.8%
3783529 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.50 43.0 3.06e-01 100.0% 61.0%