←Back to structures
OL631484.1__WCD43979.1__ECML606-1_000028__00028
Bact-VirOL631484.1__WCD43979.1__ECML606-1_000028__00028
Identity
- Accession:
- OL631484 ↗
- Kingdom:
- phage
Quality
79.4
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-72
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cbyA00 | 3.40.198.10 | Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like | 0.75 | 51.0 | 3.27e-01 | 71.4% | 15.4% |
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.72 | 59.0 | 5.61e-01 | 91.8% | 96.6% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.70 | 61.0 | 5.08e-01 | 100.0% | 88.4% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 51.0 | 4.65e-01 | 83.7% | 77.9% |
| 3kp1E02 | 1.10.8.1000 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ornithine 4,5 aminomutase S component, alpha subunit-like | 0.68 | 57.0 | 5.15e-01 | 98.0% | 82.9% |
| 4evxA00 | 1.10.1740.240 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.65 | 48.0 | 3.97e-01 | 85.7% | 89.7% |
| 1zu4A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.64 | 52.0 | 4.50e-01 | 100.0% | 67.8% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.64 | 54.0 | 5.22e-01 | 100.0% | 92.9% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.64 | 54.0 | 4.97e-01 | 100.0% | 88.1% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.63 | 50.0 | 4.46e-01 | 100.0% | 84.1% |
| 2c61A00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 47.0 | 2.75e-01 | 91.8% | 50.8% |
| 4oifB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 47.0 | 2.84e-01 | 95.9% | 89.4% |
| 3kk4A01 | 1.10.3990.20 | Mainly Alpha › Orthogonal Bundle › Ribbon-helix-helix fold › protein bp1543 | 0.58 | 44.0 | 3.54e-01 | 87.8% | 59.6% |
| 4yzgA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.57 | 47.0 | 2.98e-01 | 98.0% | 93.9% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.55 | 43.0 | 3.75e-01 | 100.0% | 97.8% |
| 2kvdA02 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.54 | 37.0 | 3.58e-01 | 91.8% | 58.6% |
| 4zkdA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 40.0 | 2.60e-01 | 83.7% | 17.7% |
| 2qvwB05 | 1.10.1740.150 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.54 | 42.0 | 3.88e-01 | 100.0% | 69.7% |
| 3d3oA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 43.0 | 2.97e-01 | 89.8% | 31.2% |
| 1bccA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 44.0 | 3.03e-01 | 100.0% | 47.5% |
| 2r18A02 | 1.10.8.880 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Birnavirus VP3 protein, domain 2 | 0.53 | 44.0 | 4.20e-01 | 98.0% | 88.1% |
| 1t11A02 | 1.10.3120.10 | Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain | 0.53 | 43.0 | 3.11e-01 | 100.0% | 66.9% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 40.0 | 3.01e-01 | 89.8% | 36.8% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.51 | 38.0 | 3.85e-01 | 89.8% | 91.7% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4953264 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.81 | 74.0 | 6.08e-01 | 100.0% | 65.9% |
| 3700826 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.77 | 65.0 | 5.88e-01 | 98.0% | 92.9% |
| 3707772 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.75 | 64.0 | 5.76e-01 | 98.0% | 92.9% |
| 4361639 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.73 | 62.0 | 5.40e-01 | 100.0% | 63.3% |
| 1196985 | 3009.1.1.1 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › DSBA | 0.70 | 58.0 | 5.45e-01 | 100.0% | 79.7% |
| 3941245 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.69 | 57.0 | 5.29e-01 | 100.0% | 72.3% |
| 4068222 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.68 | 55.0 | 5.49e-01 | 100.0% | 98.0% |
| 4216342 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.68 | 58.0 | 5.15e-01 | 100.0% | 81.3% |
| 4351042 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.68 | 54.0 | 5.24e-01 | 100.0% | 79.7% |
| 4939455 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.67 | 54.0 | 5.24e-01 | 100.0% | 83.3% |
| 3233442 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.67 | 57.0 | 5.40e-01 | 100.0% | 85.0% |
| 4301122 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.67 | 52.0 | 5.27e-01 | 95.9% | 94.0% |
| 3392896 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.66 | 52.0 | 4.45e-01 | 89.8% | 68.2% |
| 5064035 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.63 | 51.0 | 4.95e-01 | 100.0% | 96.7% |
| 3468869 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 41.0 | 4.03e-01 | 71.4% | 60.0% |
| 3313889 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 40.0 | 3.97e-01 | 79.6% | 62.0% |
| 5076000 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.63 | 51.0 | 4.71e-01 | 100.0% | 84.3% |
| 4182099 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.63 | 50.0 | 5.00e-01 | 95.9% | 94.0% |
| 4498700 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.63 | 51.0 | 4.23e-01 | 100.0% | 72.0% |
| 3870923 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 48.0 | 3.63e-01 | 100.0% | 32.0% |
| 3463735 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.62 | 40.0 | 3.95e-01 | 71.4% | 60.0% |
| 3198611 | 148.1.3.195 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PPP4R2 | 0.59 | 50.0 | 4.21e-01 | 100.0% | 80.7% |
| 2791543 | 568.1.1.0 ↗ | few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related | 0.59 | 44.0 | 4.57e-01 | 87.8% | 86.7% |
| 3970865 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.58 | 50.0 | 3.30e-01 | 98.0% | 98.2% |
| 2048177 | 108.5.1.1 ↗ | alpha arrays › EF-hand › Helical insertion domain in malaria PfNDH2 › Helical insertion domain in malaria PfNDH2 › PfNDH2_hel_ins | 0.55 | 44.0 | 4.06e-01 | 100.0% | 70.4% |
| 3432698 | 185.1.1.3 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Hydrophob_seed | 0.55 | 37.0 | 3.11e-01 | 73.5% | 38.9% |
| 3898536 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.54 | 43.0 | 3.75e-01 | 95.9% | 69.4% |
| 4463205 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.52 | 43.0 | 2.54e-01 | 100.0% | 18.5% |
| 3934456 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.52 | 39.0 | 3.52e-01 | 85.7% | 77.1% |
| 5016159 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.51 | 40.0 | 3.86e-01 | 91.8% | 80.0% |
| 4643309 | 2004.1.1.702 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, MCM, AAA_2 | 0.51 | 44.0 | 2.74e-01 | 100.0% | 89.6% |
| 3927475 | 192.19.1.0 ↗ | alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like | 0.51 | 39.0 | 3.79e-01 | 83.7% | 74.5% |