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OL657226.1__UMO75300.1__CPT_434_36__00036
Bact-VirOL657226.1__UMO75300.1__CPT_434_36__00036
Identity
- Accession:
- OL657226 ↗
- Kingdom:
- phage
Quality
87.5
mean pLDDT
Taxonomy
TaxID: 1541872
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 117-183
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 40.0 | 3.25e-01 | 100.0% | 30.6% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 55.0 | 5.81e-01 | 98.5% | 100.0% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.69 | 39.0 | 3.48e-01 | 100.0% | 41.1% |
| 2ckfB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 43.0 | 3.16e-01 | 100.0% | 27.1% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 44.0 | 3.22e-01 | 100.0% | 28.1% |
| 3b8lA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 42.0 | 3.29e-01 | 100.0% | 32.6% |
| 2rgqB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 41.0 | 3.21e-01 | 100.0% | 33.1% |
| 3a76A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 44.0 | 3.35e-01 | 100.0% | 34.5% |
| 2r4iA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 41.0 | 3.35e-01 | 100.0% | 36.6% |
| 3kspA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 41.0 | 3.29e-01 | 100.0% | 34.9% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 54.0 | 5.22e-01 | 97.0% | 87.8% |
| 3hzpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 41.0 | 3.25e-01 | 100.0% | 35.4% |
| 4i4kA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 41.0 | 3.23e-01 | 100.0% | 33.3% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 52.0 | 5.02e-01 | 100.0% | 97.5% |
| 4dimA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.61 | 54.0 | 3.81e-01 | 100.0% | 40.2% |
| 3trzA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 52.0 | 4.85e-01 | 100.0% | 95.4% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 40.0 | 3.06e-01 | 100.0% | 29.9% |
| 2qcpX01 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.60 | 52.0 | 5.04e-01 | 100.0% | 98.7% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 51.0 | 4.82e-01 | 100.0% | 90.2% |
| 1l1oF01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 50.0 | 4.16e-01 | 100.0% | 69.5% |
| 1khiA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 49.0 | 4.89e-01 | 98.5% | 97.2% |
| 4gb5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 43.0 | 3.28e-01 | 100.0% | 35.1% |
| 3gveA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.58 | 52.0 | 3.29e-01 | 100.0% | 90.4% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 48.0 | 4.08e-01 | 100.0% | 82.7% |
| 2rajA02 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 46.0 | 3.84e-01 | 91.0% | 85.7% |
| 4l8oA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 41.0 | 3.04e-01 | 100.0% | 31.1% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 48.0 | 4.24e-01 | 100.0% | 64.7% |
| 3r5xD02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.56 | 50.0 | 3.81e-01 | 100.0% | 56.1% |
| 1idpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 41.0 | 3.14e-01 | 100.0% | 36.1% |
| 4hnvB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.54 | 46.0 | 2.99e-01 | 100.0% | 24.9% |
| 4iwxA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.54 | 47.0 | 4.04e-01 | 100.0% | 73.9% |
| 6a97C01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.54 | 40.0 | 3.34e-01 | 83.6% | 99.2% |
| 3gzrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 37.0 | 2.95e-01 | 100.0% | 34.8% |
| 7ly5B01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.53 | 46.0 | 3.61e-01 | 100.0% | 83.7% |
| 2codA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 35.0 | 3.22e-01 | 71.6% | 50.0% |
| 1kblA06 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 46.0 | 4.05e-01 | 100.0% | 96.9% |
| 7xoiD01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 30.0 | 2.58e-01 | 100.0% | 35.5% |
| 5i47B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 44.0 | 3.95e-01 | 100.0% | 70.5% |
| 3i2nA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 39.0 | 2.61e-01 | 92.5% | 31.6% |
| 1mveA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 41.0 | 2.95e-01 | 100.0% | 92.6% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5036656 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.82 | 39.0 | 4.11e-01 | 100.0% | 51.7% |
| 5016946 | 4312.1.1.22 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › PF27370 | 0.71 | 37.0 | 3.37e-01 | 100.0% | 37.8% |
| 5080835 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 52.0 | 5.61e-01 | 95.5% | 98.2% |
| 4930180 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 51.0 | 5.49e-01 | 94.0% | 100.0% |
| 4352991 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 55.0 | 5.72e-01 | 98.5% | 98.3% |
| 4952888 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 50.0 | 5.36e-01 | 94.0% | 100.0% |
| 4992873 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 52.0 | 5.44e-01 | 97.0% | 98.3% |
| 5058672 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 52.0 | 5.49e-01 | 94.0% | 98.3% |
| 3222225 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 55.0 | 5.55e-01 | 100.0% | 98.5% |
| 4946166 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 51.0 | 5.36e-01 | 100.0% | 98.3% |
| 5072502 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 50.0 | 5.29e-01 | 97.0% | 100.0% |
| 4614883 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.64 | 34.0 | 3.20e-01 | 98.5% | 41.2% |
| 4972486 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 47.0 | 5.02e-01 | 95.5% | 100.0% |
| 3244265 | 2.1.1.317 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF272, PF26704 | 0.63 | 54.0 | 4.25e-01 | 100.0% | 45.3% |
| 3953277 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.62 | 42.0 | 3.23e-01 | 100.0% | 32.4% |
| 135548 | 243.1.1.19 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3804 | 0.62 | 41.0 | 3.25e-01 | 100.0% | 35.2% |
| 3238435 | 2.1.1.126 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF272 | 0.62 | 52.0 | 5.08e-01 | 100.0% | 88.0% |
| 3960457 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.62 | 42.0 | 3.15e-01 | 100.0% | 30.3% |
| 3645679 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 49.0 | 4.39e-01 | 95.5% | 65.0% |
| 4336627 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 49.0 | 4.37e-01 | 100.0% | 68.6% |
| 3664190 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 49.0 | 4.87e-01 | 97.0% | 94.3% |
| 3698630 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.59 | 35.0 | 3.09e-01 | 100.0% | 38.1% |
| 4939349 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.58 | 48.0 | 4.20e-01 | 100.0% | 60.9% |
| 3305240 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.58 | 46.0 | 3.58e-01 | 94.0% | 96.5% |
| 2579126 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.57 | 49.0 | 3.94e-01 | 100.0% | 68.1% |
| 3874008 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 47.0 | 4.73e-01 | 100.0% | 95.7% |
| 3475813 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 36.0 | 3.93e-01 | 98.5% | 93.3% |
| 3562555 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 48.0 | 4.18e-01 | 100.0% | 64.5% |
| 4680521 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.56 | 50.0 | 3.44e-01 | 100.0% | 39.3% |
| 3635749 | 76.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I | 0.55 | 47.0 | 3.57e-01 | 98.5% | 86.7% |
| 3640969 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 41.0 | 2.75e-01 | 94.0% | 34.2% |
| 4018808 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.51 | 40.0 | 3.45e-01 | 94.0% | 74.2% |
D2
medium
residues 4-38
Domain cluster:
representative
D3
medium
residues 46-113
Domain cluster:
representative
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2efjA01 | 1.10.1200.270 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Methyltransferase, alpha-helical capping domain | 0.80 | 59.0 | 4.66e-01 | 83.8% | 39.6% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.72 | 45.0 | 3.92e-01 | 75.0% | 42.2% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.70 | 50.0 | 4.08e-01 | 73.5% | 51.7% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.70 | 44.0 | 3.39e-01 | 75.0% | 29.7% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.70 | 55.0 | 5.58e-01 | 89.7% | 86.8% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 49.0 | 5.31e-01 | 76.5% | 89.5% |
| 7zmgL01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 42.0 | 4.03e-01 | 76.5% | 53.8% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 43.0 | 4.59e-01 | 72.1% | 75.9% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.67 | 48.0 | 4.47e-01 | 75.0% | 74.1% |
| 2jrmA00 | 1.10.10.620 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ribosome modulation factor like domain | 0.67 | 39.0 | 4.13e-01 | 70.6% | 65.0% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 47.0 | 4.21e-01 | 73.5% | 54.2% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 48.0 | 3.27e-01 | 80.9% | 22.0% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 46.0 | 4.86e-01 | 79.4% | 81.7% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.66 | 53.0 | 4.10e-01 | 88.2% | 99.3% |
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 47.0 | 4.18e-01 | 75.0% | 52.0% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.65 | 45.0 | 4.30e-01 | 70.6% | 75.3% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.65 | 44.0 | 4.05e-01 | 70.6% | 71.1% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.65 | 50.0 | 4.26e-01 | 85.3% | 51.4% |
| 1t07A00 | 1.10.3880.10 | Mainly Alpha › Orthogonal Bundle › YggX-like › Fe(II) trafficking protein YggX | 0.65 | 47.0 | 4.49e-01 | 77.9% | 96.3% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.64 | 45.0 | 4.64e-01 | 79.4% | 78.1% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 39.0 | 3.84e-01 | 75.0% | 57.5% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 53.0 | 4.55e-01 | 91.2% | 70.4% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.63 | 44.0 | 4.28e-01 | 75.0% | 66.2% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.62 | 44.0 | 4.77e-01 | 75.0% | 86.2% |
| 2db7A01 | 6.10.250.980 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 41.0 | 4.55e-01 | 76.5% | 88.7% |
| 5svlA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.62 | 51.0 | 5.17e-01 | 91.2% | 97.1% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.61 | 43.0 | 4.56e-01 | 76.5% | 82.0% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 46.0 | 4.79e-01 | 86.8% | 85.5% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.61 | 49.0 | 4.14e-01 | 86.8% | 68.8% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.61 | 49.0 | 4.15e-01 | 89.7% | 92.2% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 47.0 | 3.59e-01 | 82.4% | 99.3% |
| 2nsaA00 | 1.10.3120.10 | Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain | 0.60 | 50.0 | 3.81e-01 | 100.0% | 38.3% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 48.0 | 4.66e-01 | 89.7% | 98.7% |
| 3ic9A02 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.59 | 48.0 | 4.77e-01 | 92.6% | 100.0% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 42.0 | 3.56e-01 | 73.5% | 64.2% |
| 6g94A00 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.59 | 50.0 | 3.71e-01 | 92.6% | 97.1% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 38.0 | 4.14e-01 | 85.3% | 82.1% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.58 | 45.0 | 4.00e-01 | 85.3% | 58.2% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.58 | 49.0 | 4.00e-01 | 97.1% | 76.7% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.57 | 45.0 | 4.49e-01 | 83.8% | 80.3% |
| 3piwA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.57 | 42.0 | 3.26e-01 | 79.4% | 96.8% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.56 | 41.0 | 3.71e-01 | 77.9% | 78.9% |
| 4a4kA01 | 1.20.1500.20 | Mainly Alpha › Up-down Bundle › YheA-like fold › | 0.56 | 42.0 | 3.47e-01 | 95.6% | 46.9% |
| 1xl3C00 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.56 | 43.0 | 3.90e-01 | 86.8% | 60.4% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.55 | 41.0 | 4.19e-01 | 80.9% | 82.1% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.55 | 43.0 | 3.56e-01 | 82.4% | 68.8% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.54 | 47.0 | 4.62e-01 | 97.1% | 92.0% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 44.0 | 4.49e-01 | 98.5% | 93.8% |
| 3g80A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 45.0 | 4.48e-01 | 92.6% | 90.4% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.54 | 48.0 | 3.71e-01 | 97.1% | 72.4% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.53 | 38.0 | 3.83e-01 | 76.5% | 85.9% |
| 1avoB00 | 1.20.120.180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain | 0.53 | 46.0 | 3.67e-01 | 98.5% | 77.1% |
| 4lunU00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 43.0 | 2.73e-01 | 86.8% | 21.9% |
| 4akgA14 | 1.20.1280.160 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.52 | 43.0 | 3.70e-01 | 91.2% | 73.4% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.52 | 42.0 | 3.71e-01 | 95.6% | 98.2% |
| 4yjwA00 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.52 | 46.0 | 3.55e-01 | 100.0% | 44.4% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3894123 | 148.1.3.56 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Arv1 | 0.81 | 72.0 | 5.09e-01 | 95.6% | 66.3% |
| 3949317 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.80 | 62.0 | 5.30e-01 | 83.8% | 53.3% |
| 4281883 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.75 | 59.0 | 4.68e-01 | 100.0% | 42.2% |
| 3674195 | 103.9.1.1 ↗ | alpha arrays › RuvA-C › RanGAP2 N-terminal domain › RanGAP2 N-terminal domain › WPP | 0.75 | 68.0 | 5.83e-01 | 100.0% | 65.7% |
| 3388455 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.75 | 65.0 | 5.43e-01 | 97.1% | 63.5% |
| 5078040 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.74 | 59.0 | 5.48e-01 | 94.1% | 69.4% |
| 3923984 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.73 | 46.0 | 4.14e-01 | 70.6% | 46.3% |
| 4210642 | 3755.1.1.12 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › CheZ | 0.73 | 50.0 | 3.96e-01 | 70.6% | 92.3% |
| 3487880 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.73 | 57.0 | 5.87e-01 | 86.8% | 98.5% |
| 5018716 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.72 | 47.0 | 4.66e-01 | 73.5% | 64.3% |
| 3489761 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.71 | 51.0 | 3.55e-01 | 76.5% | 66.7% |
| 5017842 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.70 | 53.0 | 4.89e-01 | 79.4% | 67.1% |
| 3412019 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.70 | 47.0 | 4.30e-01 | 72.1% | 52.2% |
| 4092193 | 3755.4.1.53 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › CemA | 0.70 | 60.0 | 4.71e-01 | 100.0% | 74.8% |
| 3597348 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 62.0 | 4.04e-01 | 100.0% | 43.9% |
| 3974625 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.70 | 42.0 | 4.19e-01 | 70.6% | 58.6% |
| 4959390 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.69 | 44.0 | 4.44e-01 | 72.1% | 64.3% |
| 5004053 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.69 | 53.0 | 4.64e-01 | 83.8% | 56.0% |
| 3967813 | 5086.1.1.93 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_EMRA | 0.69 | 47.0 | 3.73e-01 | 70.6% | 82.3% |
| 3940867 | 632.22.1.67 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › DUF842 | 0.69 | 60.0 | 5.39e-01 | 98.5% | 86.3% |
| 4605223 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.68 | 48.0 | 4.36e-01 | 73.5% | 58.9% |
| 3249529 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.68 | 57.0 | 4.51e-01 | 91.2% | 95.6% |
| 4210734 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.68 | 49.0 | 4.20e-01 | 75.0% | 91.4% |
| 3264876 | 604.12.1.42 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF202 | 0.67 | 47.0 | 4.15e-01 | 73.5% | 52.0% |
| 3602986 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.67 | 56.0 | 5.01e-01 | 91.2% | 68.4% |
| 4928105 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.67 | 53.0 | 4.99e-01 | 89.7% | 69.4% |
| 3581078 | 5050.1.1.4 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Nucleoside_tran | 0.67 | 52.0 | 3.75e-01 | 97.1% | 29.0% |
| 4569675 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.67 | 57.0 | 5.02e-01 | 97.1% | 68.6% |
| 5054424 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.67 | 53.0 | 5.02e-01 | 88.2% | 72.5% |
| 3731914 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.67 | 55.0 | 4.35e-01 | 91.2% | 57.9% |
| 4940797 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.66 | 48.0 | 4.48e-01 | 76.5% | 63.5% |
| 3428852 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.66 | 53.0 | 4.16e-01 | 85.3% | 100.0% |
| 3412062 | 603.1.1.19 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-18_N | 0.66 | 49.0 | 3.23e-01 | 80.9% | 20.8% |
| 5072135 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.65 | 56.0 | 4.11e-01 | 98.5% | 55.4% |
| 4013672 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.65 | 48.0 | 4.19e-01 | 79.4% | 53.0% |
| 4951179 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.65 | 54.0 | 4.75e-01 | 91.2% | 62.0% |
| 5060491 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.64 | 48.0 | 3.98e-01 | 79.4% | 47.5% |
| 3613914 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.64 | 45.0 | 4.43e-01 | 75.0% | 78.7% |
| 4946898 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.64 | 50.0 | 4.80e-01 | 82.4% | 74.7% |
| 4993210 | 3755.3.1.635 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PHA_synth_III_E | 0.63 | 52.0 | 3.78e-01 | 91.2% | 34.1% |
| 5058468 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.62 | 50.0 | 4.92e-01 | 95.6% | 81.3% |
| 5012157 | 605.1.1.354 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › MS_channel_1st_1 | 0.62 | 51.0 | 4.79e-01 | 98.5% | 71.8% |
| 3973208 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.61 | 51.0 | 4.92e-01 | 97.1% | 82.7% |
| 3573589 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.61 | 47.0 | 4.10e-01 | 82.4% | 94.0% |
| 4997481 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.60 | 50.0 | 4.38e-01 | 89.7% | 94.0% |
| 3404270 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 50.0 | 4.11e-01 | 100.0% | 50.0% |
| 3386973 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.60 | 48.0 | 4.32e-01 | 85.3% | 88.9% |
| 3962991 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.59 | 48.0 | 3.39e-01 | 95.6% | 30.3% |
| 3704838 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.59 | 42.0 | 4.21e-01 | 79.4% | 74.3% |
| 5041194 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.58 | 47.0 | 3.68e-01 | 91.2% | 88.4% |
| 3221764 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.56 | 43.0 | 4.07e-01 | 92.6% | 68.8% |
| 3971758 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.56 | 49.0 | 4.56e-01 | 97.1% | 94.1% |
| 3631342 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.54 | 47.0 | 4.06e-01 | 97.1% | 68.6% |
| 3947741 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.52 | 45.0 | 3.76e-01 | 97.1% | 70.8% |