←Back to structures
OL676770.1__UIW11043.1__VP5_031__00030
Bact-VirOL676770.1__UIW11043.1__VP5_031__00030
Identity
- Accession:
- OL676770 ↗
- Kingdom:
- phage
Quality
54.9
mean pLDDT
Taxonomy
TaxID: 2900301
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-98
D2
high
residues 114-163
Domain cluster:
rep: MG592599.1__AUR96971.1__NVP1235O_38__00038__D78-125
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rniA01 | 3.30.720.160 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Bifunctional DNA primase/polymerase, N-terminal | 0.65 | 51.0 | 4.70e-01 | 92.0% | 87.1% |
| 1pqzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 48.0 | 3.87e-01 | 86.0% | 76.2% |
| 1f6fB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 45.0 | 3.73e-01 | 82.0% | 75.3% |
| 1whoA00 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.61 | 50.0 | 4.08e-01 | 90.0% | 71.3% |
| 2xf1A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.61 | 42.0 | 3.19e-01 | 92.0% | 30.3% |
| 6dgiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.60 | 49.0 | 4.53e-01 | 96.0% | 86.8% |
| 1krhA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 50.0 | 4.15e-01 | 100.0% | 92.8% |
| 1dkiC01 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.60 | 47.0 | 3.37e-01 | 100.0% | 40.2% |
| 4d7pA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.59 | 45.0 | 3.76e-01 | 86.0% | 77.1% |
| 2ofqA01 | 2.60.40.2500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 49.0 | 4.19e-01 | 98.0% | 82.0% |
| 1a0iA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.58 | 47.0 | 4.11e-01 | 96.0% | 67.5% |
| 2pq0A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.57 | 46.0 | 3.89e-01 | 100.0% | 68.0% |
| 2xtsA02 | 2.60.40.650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 44.0 | 3.33e-01 | 88.0% | 64.6% |
| 2blfA02 | 2.60.40.650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 44.0 | 3.45e-01 | 88.0% | 71.1% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 47.0 | 3.94e-01 | 98.0% | 78.0% |
| 4x83A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 3.77e-01 | 96.0% | 66.7% |
| 2l72A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.56 | 41.0 | 3.16e-01 | 94.0% | 33.9% |
| 6kwzA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.56 | 37.0 | 3.10e-01 | 70.0% | 67.3% |
| 4lr4A02 | 2.60.120.1430 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 3.29e-01 | 100.0% | 74.4% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.55 | 38.0 | 3.71e-01 | 74.0% | 94.5% |
| 2e4tA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 43.0 | 3.47e-01 | 98.0% | 67.8% |
| 6a48A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 41.0 | 3.18e-01 | 94.0% | 91.1% |
| 2yuxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 3.37e-01 | 88.0% | 63.9% |
| 2e26A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 44.0 | 3.03e-01 | 98.0% | 72.7% |
| 2e26A03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 45.0 | 3.14e-01 | 100.0% | 71.2% |
| 2qeaB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 41.0 | 3.01e-01 | 88.0% | 40.4% |
| 6a48A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 41.0 | 3.19e-01 | 96.0% | 94.4% |
| 2gnrA01 | 6.10.30.10 | Special › Helix non-globular › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › | 0.53 | 38.0 | 3.49e-01 | 78.0% | 60.9% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 39.0 | 3.83e-01 | 88.0% | 89.8% |
| 2e26A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 3.21e-01 | 100.0% | 83.2% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 43.0 | 3.82e-01 | 100.0% | 96.2% |
| 1m4jA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.52 | 39.0 | 3.06e-01 | 90.0% | 79.7% |
| 4n0rA03 | 2.60.40.3950 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.38e-01 | 96.0% | 83.6% |
| 4kg8A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 41.0 | 3.26e-01 | 100.0% | 93.0% |
| 3bpnC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.22e-01 | 88.0% | 72.3% |
| 4iedA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 41.0 | 2.64e-01 | 88.0% | 59.9% |
| 2qqkA02 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.51 | 41.0 | 3.32e-01 | 98.0% | 73.9% |
| 1x5fA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.29e-01 | 100.0% | 59.2% |
| 4pqqA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 40.0 | 3.02e-01 | 100.0% | 85.3% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4082584 | 7579.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 | 0.65 | 46.0 | 2.63e-01 | 76.0% | 44.8% |
| 3438348 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 51.0 | 4.58e-01 | 92.0% | 98.7% |
| 5077969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 52.0 | 4.56e-01 | 96.0% | 88.7% |
| 3998681 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 46.0 | 3.75e-01 | 82.0% | 82.0% |
| 3781143 | 4012.4.1.0 ↗ | a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain | 0.62 | 43.0 | 4.47e-01 | 100.0% | 80.0% |
| 3169277 | 320.2.1.0 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain | 0.61 | 42.0 | 3.64e-01 | 72.0% | 97.5% |
| 4431701 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 52.0 | 4.29e-01 | 100.0% | 82.1% |
| 3925834 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 42.0 | 2.96e-01 | 90.0% | 23.9% |
| 3249113 | 11.1.1.698 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 | 0.60 | 48.0 | 3.95e-01 | 92.0% | 85.3% |
| 4887308 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.59 | 50.0 | 4.82e-01 | 100.0% | 87.9% |
| 4137973 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.59 | 47.0 | 3.80e-01 | 94.0% | 63.6% |
| 3914632 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.59 | 40.0 | 2.92e-01 | 92.0% | 25.7% |
| 3334372 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.58 | 41.0 | 4.37e-01 | 98.0% | 95.0% |
| 3953489 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.58 | 48.0 | 3.98e-01 | 100.0% | 90.0% |
| 4031510 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 46.0 | 3.99e-01 | 98.0% | 77.8% |
| 4332042 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 44.0 | 4.10e-01 | 92.0% | 85.7% |
| 5067952 | 11.1.1.288 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_13 | 0.57 | 44.0 | 3.65e-01 | 86.0% | 80.0% |
| 3557265 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.57 | 40.0 | 2.86e-01 | 92.0% | 25.5% |
| 4952878 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.55 | 38.0 | 3.79e-01 | 76.0% | 89.1% |
| 3396084 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 41.0 | 3.34e-01 | 88.0% | 69.1% |
| 4342941 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.54 | 47.0 | 3.97e-01 | 100.0% | 75.3% |
| 2559844 | 10.32.1.77 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Reelin_subrepeat-B | 0.54 | 42.0 | 3.19e-01 | 96.0% | 89.3% |
| 3538214 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 44.0 | 2.70e-01 | 98.0% | 36.9% |
| 3538224 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.53 | 42.0 | 3.05e-01 | 92.0% | 80.0% |
| 3262549 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.53 | 44.0 | 2.93e-01 | 100.0% | 63.5% |
| 3883198 | 10.32.1.77 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Reelin_subrepeat-B | 0.52 | 39.0 | 2.84e-01 | 94.0% | 82.1% |
| 3627479 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.52 | 44.0 | 3.39e-01 | 100.0% | 64.0% |
| 3935529 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.52 | 41.0 | 3.04e-01 | 96.0% | 73.1% |
| 3267161 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 3.69e-01 | 100.0% | 81.1% |
| 4940383 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 42.0 | 3.14e-01 | 100.0% | 94.2% |
| 5079907 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.52 | 41.0 | 2.33e-01 | 90.0% | 12.8% |
| 3616235 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.62e-01 | 100.0% | 56.2% |
| 3910743 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 39.0 | 3.34e-01 | 88.0% | 75.6% |
| 3933905 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.51 | 38.0 | 2.99e-01 | 92.0% | 55.7% |
| 4255542 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.50 | 38.0 | 2.80e-01 | 90.0% | 85.5% |
| 2486933 | 7032.1.1.1 ↗ | a+b two layers › Paratox › Paratox › Paratox › Paratox | 0.50 | 38.0 | 3.53e-01 | 88.0% | 83.8% |
| 4467985 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.50 | 41.0 | 3.29e-01 | 100.0% | 46.0% |
D3
medium
residues 168-283