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OL689230.1__UXX42207.1__X__00016
Bact-VirOL689230.1__UXX42207.1__X__00016
Identity
- Accession:
- OL689230 ↗
- Kingdom:
- phage
Quality
50.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 86-171
D2
medium
residues 28-46_177-189_205-295
D3
medium
residues 296-326_763-808
D4
medium
residues 809-849_890-931_968-1005_1028-1060
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4xaaA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.53 | 33.0 | 2.94e-01 | 92.2% | 42.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4658841 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.55 | 27.0 | 3.22e-01 | 87.0% | 66.7% |
| 3217622 | 10.11.1.1 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding | 0.55 | 28.0 | 3.40e-01 | 81.8% | 74.7% |
| 3612107 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.55 | 22.0 | 3.19e-01 | 70.1% | 83.3% |
| 3404775 | 10.11.1.1 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding | 0.55 | 28.0 | 3.38e-01 | 82.5% | 74.0% |
| 3227518 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 30.0 | 3.47e-01 | 83.1% | 73.6% |
| 3508515 | 10.11.1.1 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding | 0.54 | 28.0 | 3.47e-01 | 82.5% | 81.1% |
| 4028686 | 10.11.1.1 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding | 0.54 | 27.0 | 3.55e-01 | 82.5% | 88.7% |
| 3939850 | 10.11.1.1 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding | 0.53 | 28.0 | 3.52e-01 | 81.8% | 87.1% |
| 3997500 | 10.11.1.1 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding | 0.53 | 28.0 | 3.51e-01 | 82.5% | 87.1% |
| 160184 | 10.11.1.1 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding | 0.51 | 29.0 | 3.53e-01 | 82.5% | 87.4% |
| 3220750 | 10.4.1.19 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › Glycoprotein | 0.51 | 31.0 | 3.52e-01 | 83.1% | 78.3% |
D5
medium
residues 850-889_932-967_1006-1027_1061-1071
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rlsB00 | 2.60.40.1970 | Mainly Beta › Sandwich › Immunoglobulin-like › YEATS domain | 0.68 | 38.0 | 3.46e-01 | 100.0% | 41.7% |
| 3kptB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 35.0 | 3.55e-01 | 100.0% | 55.6% |
| 5nfiB02 | 2.60.40.2090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 39.0 | 3.67e-01 | 99.1% | 57.9% |
| 1z2nX03 | 3.30.1490.220 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.55 | 30.0 | 3.10e-01 | 97.2% | 52.8% |
| 1f6fB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 34.0 | 3.63e-01 | 100.0% | 70.1% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.51 | 34.0 | 3.39e-01 | 100.0% | 62.5% |
| 4hssB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.52e-01 | 75.2% | 99.2% |
| 4j25F00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 40.0 | 3.46e-01 | 86.2% | 81.8% |
| 3winE03 | 2.60.120.1090 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 40.0 | 4.00e-01 | 99.1% | 82.7% |
| 4h3wA02 | 2.60.120.1260 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 44.0 | 4.01e-01 | 100.0% | 81.6% |
| 1y6kR02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.58e-01 | 100.0% | 75.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3355832 | 11.2.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › YEATS | 0.69 | 39.0 | 4.36e-01 | 100.0% | 72.3% |
| 5062347 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 34.0 | 3.98e-01 | 100.0% | 81.3% |
| 4978985 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 34.0 | 3.79e-01 | 100.0% | 72.9% |
| 3389170 | 391.1.2.3 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › SVWC | 0.56 | 31.0 | 3.49e-01 | 87.2% | 68.2% |
| 3508236 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 31.0 | 3.42e-01 | 95.4% | 67.1% |
| 3593797 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.56 | 29.0 | 3.83e-01 | 96.3% | 98.2% |
| 3618777 | 11.1.1.842 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_C | 0.55 | 39.0 | 4.00e-01 | 100.0% | 74.3% |
| 4048813 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.54 | 29.0 | 3.76e-01 | 94.5% | 100.0% |
| 3756345 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.53 | 47.0 | 4.18e-01 | 100.0% | 81.2% |
| 5010503 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 3.94e-01 | 100.0% | 83.2% |
| 5007586 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.52 | 27.0 | 2.93e-01 | 97.2% | 55.6% |
| 4440719 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 36.0 | 3.94e-01 | 100.0% | 87.8% |
| 3484082 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 41.0 | 3.46e-01 | 95.4% | 50.3% |
| 3488518 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 34.0 | 3.51e-01 | 100.0% | 72.0% |