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OL742560.1__UKH48307.1__SEA_LILMAC1015_21__00021
Bact-VirOL742560.1__UKH48307.1__SEA_LILMAC1015_21__00021
Identity
- Accession:
- OL742560 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Berryhillviridae›
Lilmacvirus›
Arthrobacter_phage_Lilmac1015
TaxID: 2912653
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-99
Domain cluster:
rep: LC711079__BDI54939.1__X__00012__D153-228
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.76 | 64.0 | 5.16e-01 | 97.9% | 49.1% |
| 3cddA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.70 | 63.0 | 4.98e-01 | 97.9% | 51.1% |
| 1twfB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.68 | 47.0 | 4.35e-01 | 71.6% | 93.5% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 45.0 | 4.62e-01 | 75.8% | 71.1% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.67 | 47.0 | 4.27e-01 | 71.6% | 93.5% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 58.0 | 5.69e-01 | 96.8% | 91.4% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.65 | 53.0 | 4.32e-01 | 88.4% | 50.6% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 46.0 | 4.84e-01 | 81.1% | 82.6% |
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 58.0 | 5.63e-01 | 100.0% | 91.5% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.64 | 48.0 | 4.67e-01 | 80.0% | 72.8% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.63 | 52.0 | 4.32e-01 | 96.8% | 51.2% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.63 | 51.0 | 5.15e-01 | 88.4% | 97.9% |
| 3f56A01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.62 | 48.0 | 4.68e-01 | 82.1% | 78.3% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 50.0 | 4.68e-01 | 95.8% | 70.9% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 54.0 | 4.43e-01 | 95.8% | 75.0% |
| 4gioA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 50.0 | 5.02e-01 | 93.7% | 86.5% |
| 3q0bX00 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.62 | 55.0 | 4.78e-01 | 100.0% | 85.8% |
| 3mwbB03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 44.0 | 4.44e-01 | 82.1% | 74.7% |
| 2pb7A01 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.61 | 55.0 | 4.50e-01 | 100.0% | 80.8% |
| 2onlC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 41.0 | 4.28e-01 | 71.6% | 75.6% |
| 3pu2B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 44.0 | 3.78e-01 | 75.8% | 80.4% |
| 6mv2A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 44.0 | 4.36e-01 | 75.8% | 78.4% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 39.0 | 4.22e-01 | 76.8% | 78.5% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.61 | 47.0 | 3.24e-01 | 94.7% | 24.8% |
| 3f62A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 45.0 | 4.30e-01 | 76.8% | 69.4% |
| 3fxzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 43.0 | 4.25e-01 | 91.6% | 71.4% |
| 4nohA01 | 3.30.70.3060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 38.0 | 4.27e-01 | 77.9% | 85.9% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 42.0 | 4.46e-01 | 80.0% | 84.1% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 42.0 | 4.32e-01 | 82.1% | 76.9% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 4.12e-01 | 80.0% | 63.1% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 41.0 | 4.17e-01 | 81.1% | 73.9% |
| 2q7aA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 50.0 | 4.33e-01 | 94.7% | 65.8% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 40.0 | 4.12e-01 | 78.9% | 74.4% |
| 6dw1A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.59 | 48.0 | 3.83e-01 | 92.6% | 75.7% |
| 4ydzA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 44.0 | 3.94e-01 | 80.0% | 67.4% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.58 | 50.0 | 4.83e-01 | 95.8% | 90.8% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 42.0 | 4.36e-01 | 91.6% | 82.8% |
| 3mdyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 42.0 | 4.01e-01 | 93.7% | 65.5% |
| 4bsjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 4.06e-01 | 81.1% | 74.8% |
| 1h4uA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.58 | 50.0 | 3.68e-01 | 94.7% | 86.1% |
| 1mruA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 44.0 | 4.52e-01 | 92.6% | 84.8% |
| 6d6tA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.57 | 47.0 | 3.73e-01 | 93.7% | 81.9% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 38.0 | 3.79e-01 | 76.8% | 67.0% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.56 | 44.0 | 4.30e-01 | 84.2% | 88.7% |
| 5w7tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 42.0 | 4.19e-01 | 92.6% | 77.3% |
| 5l10B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 39.0 | 3.28e-01 | 72.6% | 67.1% |
| 1vs3A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.56 | 42.0 | 3.68e-01 | 80.0% | 76.4% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.55 | 44.0 | 4.08e-01 | 87.4% | 67.2% |
| 2kvoA01 | 2.40.30.220 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 | 0.55 | 44.0 | 4.37e-01 | 92.6% | 82.7% |
| 4d6gA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.55 | 49.0 | 4.44e-01 | 100.0% | 97.7% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 41.0 | 4.11e-01 | 80.0% | 80.6% |
| 1lq9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 41.0 | 3.90e-01 | 80.0% | 71.4% |
| 6secA03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 49.0 | 3.49e-01 | 98.9% | 97.9% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 35.0 | 3.60e-01 | 74.7% | 68.9% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 38.0 | 3.58e-01 | 82.1% | 58.2% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 39.0 | 3.34e-01 | 77.9% | 76.4% |
| 1y5oA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 39.0 | 3.74e-01 | 100.0% | 66.1% |
| 3aqoA02 | 3.30.1360.200 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.52 | 45.0 | 3.98e-01 | 97.9% | 87.2% |
| 2vqeC02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.52 | 37.0 | 3.64e-01 | 73.7% | 77.0% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.51 | 36.0 | 3.24e-01 | 73.7% | 57.9% |
| 2kf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 36.0 | 3.01e-01 | 73.7% | 56.3% |
| 3pijA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 43.0 | 2.93e-01 | 95.8% | 45.5% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 43.0 | 3.51e-01 | 93.7% | 79.7% |
| 1dj0A01 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.50 | 40.0 | 3.53e-01 | 85.3% | 73.9% |
| 3wraA01 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.50 | 43.0 | 3.12e-01 | 100.0% | 69.3% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.83 | 64.0 | 6.70e-01 | 80.0% | 100.0% |
| 3604610 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 50.0 | 5.96e-01 | 71.6% | 100.0% |
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 62.0 | 6.57e-01 | 91.6% | 100.0% |
| 184486 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.74 | 60.0 | 6.40e-01 | 95.8% | 100.0% |
| 4889788 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 66.0 | 6.56e-01 | 96.8% | 99.0% |
| 3588729 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 59.0 | 5.96e-01 | 87.4% | 100.0% |
| 4031786 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.71 | 59.0 | 6.21e-01 | 89.5% | 100.0% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.71 | 61.0 | 6.26e-01 | 93.7% | 98.9% |
| 3973341 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 52.0 | 5.53e-01 | 88.4% | 87.1% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.70 | 53.0 | 4.88e-01 | 85.3% | 62.5% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.70 | 62.0 | 5.13e-01 | 96.8% | 80.5% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.70 | 62.0 | 5.68e-01 | 97.9% | 98.4% |
| 5081561 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 55.0 | 5.88e-01 | 98.9% | 100.0% |
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.70 | 61.0 | 6.29e-01 | 98.9% | 100.0% |
| 3237729 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 52.0 | 5.05e-01 | 100.0% | 75.2% |
| 3210962 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 48.0 | 4.87e-01 | 87.4% | 76.8% |
| 5002662 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 53.0 | 5.26e-01 | 87.4% | 83.0% |
| 3701705 | 319.1.1.5 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS | 0.65 | 49.0 | 4.83e-01 | 80.0% | 99.0% |
| 4482805 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.64 | 56.0 | 4.44e-01 | 95.8% | 67.2% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.64 | 55.0 | 5.67e-01 | 92.6% | 100.0% |
| 3471555 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 46.0 | 3.20e-01 | 75.8% | 23.1% |
| 4036849 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.64 | 55.0 | 4.89e-01 | 93.7% | 67.7% |
| 5076783 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.63 | 49.0 | 4.80e-01 | 82.1% | 91.4% |
| 4952909 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 53.0 | 5.14e-01 | 100.0% | 83.8% |
| 3288253 | 1.1.13.55 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 | 0.63 | 49.0 | 5.06e-01 | 93.7% | 88.9% |
| 5002753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 50.0 | 5.30e-01 | 87.4% | 96.5% |
| 3760913 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.63 | 52.0 | 4.70e-01 | 88.4% | 96.8% |
| 4272563 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.62 | 44.0 | 4.41e-01 | 76.8% | 71.0% |
| 3620856 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.62 | 51.0 | 3.96e-01 | 88.4% | 61.5% |
| 3993377 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.62 | 45.0 | 4.79e-01 | 76.8% | 100.0% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.61 | 52.0 | 5.10e-01 | 94.7% | 97.1% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 49.0 | 4.53e-01 | 91.6% | 66.4% |
| 3261290 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.61 | 45.0 | 4.20e-01 | 80.0% | 62.4% |
| 5067380 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 54.0 | 4.78e-01 | 100.0% | 96.4% |
| 4673207 | 256.1.1.10 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › MinE | 0.61 | 43.0 | 4.56e-01 | 73.7% | 92.9% |
| 3639132 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.60 | 54.0 | 4.54e-01 | 100.0% | 83.0% |
| 3934937 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.60 | 49.0 | 3.91e-01 | 88.4% | 66.8% |
| 3943285 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 54.0 | 5.21e-01 | 100.0% | 100.0% |
| 3382134 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 44.0 | 2.99e-01 | 92.6% | 21.1% |
| 3931929 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.59 | 50.0 | 3.90e-01 | 93.7% | 48.6% |
| 3823533 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.59 | 44.0 | 2.96e-01 | 93.7% | 20.5% |
| 4116290 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.59 | 40.0 | 3.96e-01 | 78.9% | 66.0% |
| 3970830 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 48.0 | 4.74e-01 | 88.4% | 91.0% |
| 3484278 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.58 | 49.0 | 3.94e-01 | 93.7% | 49.2% |
| 3617026 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 44.0 | 3.12e-01 | 94.7% | 25.3% |
| 3177508 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.57 | 50.0 | 3.34e-01 | 93.7% | 49.1% |
| 3197931 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.57 | 47.0 | 4.22e-01 | 90.5% | 82.2% |
| 3537229 | 310.3.1.21 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › HNOB | 0.57 | 50.0 | 4.86e-01 | 97.9% | 99.0% |
| 3432354 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.56 | 41.0 | 4.03e-01 | 76.8% | 87.6% |
| 4137973 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.56 | 46.0 | 4.41e-01 | 100.0% | 80.0% |
| 3953729 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.55 | 47.0 | 4.42e-01 | 95.8% | 90.0% |
| 2121270 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.55 | 39.0 | 3.93e-01 | 72.6% | 87.4% |
| 146734 | 881.3.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Outer membrane-associated lipoprotein TP0453 › Outer membrane-associated lipoprotein TP0453 › TP0453 | 0.55 | 48.0 | 3.62e-01 | 100.0% | 38.6% |
| 3683391 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.55 | 41.0 | 3.11e-01 | 92.6% | 31.9% |
| 4021812 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.55 | 50.0 | 4.35e-01 | 100.0% | 90.3% |
| 1760080 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.54 | 44.0 | 3.85e-01 | 91.6% | 80.3% |
| 4444321 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.54 | 43.0 | 3.38e-01 | 88.4% | 39.5% |
| 3235144 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 46.0 | 3.29e-01 | 93.7% | 46.8% |
| 3593223 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 39.0 | 2.61e-01 | 76.8% | 24.5% |
| 4417145 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.52 | 43.0 | 4.09e-01 | 100.0% | 77.4% |
| 3513184 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 45.0 | 3.49e-01 | 98.9% | 46.7% |
| 3261398 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 46.0 | 3.31e-01 | 100.0% | 46.6% |
| 3428387 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.51 | 44.0 | 3.63e-01 | 97.9% | 55.6% |
| None | — | 0.51 | 43.0 | 2.58e-01 | 93.7% | 20.0% | |
| 3437290 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.51 | 43.0 | 3.40e-01 | 97.9% | 51.6% |
| 4141227 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 43.0 | 3.19e-01 | 94.7% | 55.2% |
| 3456396 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 43.0 | 2.90e-01 | 94.7% | 38.3% |
| 4948221 | 331.1.1.29 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › Fer4_10 | 0.50 | 36.0 | 3.76e-01 | 75.8% | 85.9% |
D2
high
residues 101-186
Domain cluster:
rep: NC_054955.1__YP_010078167.1__KMC43_gp43__00043__D118-201
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gr5A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.78 | 67.0 | 6.73e-01 | 98.8% | 94.1% |
| 4jtmA00 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.76 | 65.0 | 6.70e-01 | 93.0% | 97.5% |
| 1wruA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.75 | 66.0 | 6.57e-01 | 96.5% | 97.7% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.74 | 63.0 | 5.10e-01 | 91.9% | 57.3% |
| 4uhvA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.72 | 65.0 | 6.36e-01 | 100.0% | 95.7% |
| 7pmpA01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.72 | 57.0 | 6.07e-01 | 87.2% | 100.0% |
| 4m0nA02 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.72 | 58.0 | 6.08e-01 | 90.7% | 97.4% |
| 2a02A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.70 | 56.0 | 5.89e-01 | 95.3% | 100.0% |
| 3gs9A02 | 3.55.50.40 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.68 | 61.0 | 5.98e-01 | 100.0% | 93.5% |
| 2wzpR02 | 3.55.50.50 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Phage tail base-plate attachment protein, domain D4 | 0.68 | 61.0 | 5.86e-01 | 100.0% | 97.0% |
| 3ov5A00 | 3.55.50.70 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.67 | 57.0 | 5.81e-01 | 93.0% | 96.4% |
| 2m5jA00 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.65 | 52.0 | 4.91e-01 | 94.2% | 72.0% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3948421 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.86 | 74.0 | 7.51e-01 | 96.5% | 92.9% |
| 4809347 | 3070.1.1.16 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 | 0.84 | 72.0 | 7.43e-01 | 98.8% | 97.6% |
| 3966286 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.83 | 68.0 | 7.24e-01 | 94.2% | 100.0% |
| 3982238 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.83 | 73.0 | 7.21e-01 | 96.5% | 90.0% |
| 3977381 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.82 | 73.0 | 7.34e-01 | 100.0% | 95.3% |
| 3974036 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.82 | 67.0 | 7.14e-01 | 95.3% | 100.0% |
| 4889789 | 3070.1.1.16 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 | 0.82 | 73.0 | 7.39e-01 | 98.8% | 96.5% |
| 4087530 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.82 | 67.0 | 7.12e-01 | 95.3% | 100.0% |
| 4048982 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.81 | 69.0 | 7.13e-01 | 98.8% | 97.5% |
| 5002751 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.81 | 72.0 | 7.30e-01 | 97.7% | 96.5% |
| 4480906 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.81 | 68.0 | 7.03e-01 | 100.0% | 97.5% |
| 4008875 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.80 | 65.0 | 6.85e-01 | 94.2% | 100.0% |
| 3948879 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.79 | 64.0 | 6.79e-01 | 95.3% | 100.0% |
| 1815424 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.79 | 63.0 | 6.68e-01 | 95.3% | 98.7% |
| 1389175 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.78 | 65.0 | 6.68e-01 | 95.3% | 93.9% |
| 185652 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.78 | 69.0 | 5.97e-01 | 100.0% | 64.1% |
| 3981376 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.78 | 63.0 | 6.68e-01 | 95.3% | 100.0% |
| 3968711 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.77 | 68.0 | 6.77e-01 | 97.7% | 97.8% |
| 3163777 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.76 | 61.0 | 6.31e-01 | 93.0% | 92.5% |
| 3503726 | 3070.1.1.8 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › DotD | 0.76 | 65.0 | 6.74e-01 | 98.8% | 100.0% |
| 4846239 | 3070.1.1.12 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd | 0.76 | 68.0 | 6.87e-01 | 100.0% | 100.0% |
| 185933 | 3070.1.1.12 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd | 0.75 | 66.0 | 6.57e-01 | 96.5% | 97.7% |
| 3964700 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.74 | 57.0 | 5.86e-01 | 81.4% | 100.0% |
| 3972068 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.73 | 62.0 | 6.16e-01 | 93.0% | 91.1% |
| 4484921 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.73 | 62.0 | 6.44e-01 | 93.0% | 100.0% |
| 3388174 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.73 | 62.0 | 6.44e-01 | 93.0% | 100.0% |
| 3967139 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.72 | 61.0 | 6.28e-01 | 94.2% | 98.8% |
| 4339226 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.72 | 62.0 | 6.26e-01 | 96.5% | 95.3% |
| 4200887 | 3070.1.1.17 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › YQBQ | 0.72 | 64.0 | 6.36e-01 | 100.0% | 97.8% |
| 3974185 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.72 | 56.0 | 5.85e-01 | 87.2% | 92.3% |
| 1833073 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.71 | 59.0 | 6.01e-01 | 90.7% | 93.9% |
| 1108144 | 3070.1.1.7 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › FecR_C | 0.71 | 57.0 | 5.78e-01 | 90.7% | 89.3% |
| 2883219 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.71 | 57.0 | 5.63e-01 | 88.4% | 83.3% |
| 3972661 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.70 | 54.0 | 5.76e-01 | 88.4% | 96.0% |
| 3511355 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.68 | 60.0 | 5.50e-01 | 100.0% | 98.3% |
| 185292 | 3070.1.1.18 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF26674 | 0.68 | 60.0 | 6.00e-01 | 100.0% | 96.6% |
| 4531399 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.67 | 54.0 | 5.45e-01 | 94.2% | 89.4% |
| 3941987 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.66 | 57.0 | 5.76e-01 | 97.7% | 100.0% |
| 4034461 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.66 | 58.0 | 5.57e-01 | 100.0% | 95.0% |
| 1146585 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.65 | 52.0 | 4.91e-01 | 94.2% | 72.0% |
| 1116063 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.65 | 56.0 | 5.51e-01 | 100.0% | 90.3% |
| 3974527 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.63 | 54.0 | 5.23e-01 | 94.2% | 93.7% |
| 3176665 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.52 | 38.0 | 3.95e-01 | 89.5% | 82.5% |
D3
high
residues 195-280
Domain cluster:
rep: IMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074338__D532-550_611-692
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.75 | 69.0 | 6.71e-01 | 100.0% | 90.5% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.75 | 62.0 | 4.91e-01 | 100.0% | 45.8% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.73 | 54.0 | 5.33e-01 | 100.0% | 72.8% |
| 1i8dA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.70 | 49.0 | 4.86e-01 | 100.0% | 69.7% |
| 2wzpR01 | 2.30.300.20 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 | 0.70 | 52.0 | 4.04e-01 | 100.0% | 35.2% |
| 3iuwA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.67 | 54.0 | 5.59e-01 | 100.0% | 92.4% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 54.0 | 5.11e-01 | 100.0% | 73.3% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 51.0 | 4.85e-01 | 100.0% | 69.2% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 48.0 | 4.65e-01 | 98.8% | 67.7% |
| 6zlvA01 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.66 | 51.0 | 5.40e-01 | 100.0% | 93.5% |
| 2as9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 52.0 | 5.05e-01 | 94.2% | 77.7% |
| 1twfB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.65 | 48.0 | 4.23e-01 | 77.9% | 91.1% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.65 | 54.0 | 4.91e-01 | 91.9% | 70.9% |
| 2p4bB02 | 3.30.200.100 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain | 0.63 | 44.0 | 4.20e-01 | 91.9% | 63.3% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.62 | 46.0 | 4.07e-01 | 77.9% | 91.1% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 46.0 | 4.64e-01 | 86.0% | 77.9% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 51.0 | 4.49e-01 | 94.2% | 89.8% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 46.0 | 4.14e-01 | 98.8% | 57.4% |
| 4z85A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 53.0 | 4.05e-01 | 98.8% | 58.9% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.59 | 50.0 | 4.48e-01 | 97.7% | 66.4% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.59 | 50.0 | 4.41e-01 | 100.0% | 64.0% |
| 2mnjB00 | 2.60.40.4160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 46.0 | 4.62e-01 | 84.9% | 92.0% |
| 2o8lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 49.0 | 4.66e-01 | 93.0% | 82.2% |
| 1shyA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 47.0 | 4.48e-01 | 97.7% | 75.5% |
| 1r3eA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.57 | 43.0 | 3.25e-01 | 80.2% | 57.5% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.57 | 40.0 | 3.34e-01 | 73.3% | 69.5% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.56 | 49.0 | 4.23e-01 | 98.8% | 88.2% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.55 | 43.0 | 4.18e-01 | 100.0% | 75.0% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.77e-01 | 84.9% | 66.3% |
| 5af7B02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.53 | 46.0 | 4.24e-01 | 100.0% | 88.6% |
| 1uxbA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.53 | 43.0 | 3.52e-01 | 94.2% | 94.6% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.77e-01 | 84.9% | 76.2% |
| 1x5kA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.61e-01 | 86.0% | 63.4% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 40.0 | 3.78e-01 | 83.7% | 82.6% |
| 3x17A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.93e-01 | 98.8% | 74.5% |
| 5w7tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 42.0 | 4.09e-01 | 90.7% | 79.4% |
| 2wtkC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 40.0 | 4.04e-01 | 95.3% | 82.0% |
| 2ok7A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 41.0 | 3.81e-01 | 100.0% | 69.6% |
| 1f5mA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 37.0 | 2.99e-01 | 76.7% | 58.5% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973341 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.86 | 67.0 | 6.74e-01 | 100.0% | 82.4% |
| 5002662 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.85 | 74.0 | 7.04e-01 | 100.0% | 80.0% |
| 3981227 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.84 | 65.0 | 6.94e-01 | 100.0% | 93.3% |
| 5002753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.83 | 71.0 | 7.19e-01 | 100.0% | 91.8% |
| 3943170 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 67.0 | 6.65e-01 | 100.0% | 83.3% |
| 3965594 | 1.1.13.53 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_3 | 0.82 | 68.0 | 6.55e-01 | 100.0% | 78.9% |
| 3945543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.81 | 66.0 | 6.71e-01 | 100.0% | 88.2% |
| 4031753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 65.0 | 6.29e-01 | 100.0% | 78.9% |
| 3059161 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.77 | 60.0 | 6.20e-01 | 100.0% | 86.6% |
| 4647050 | 1.1.13.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ | 0.76 | 59.0 | 6.08e-01 | 100.0% | 90.0% |
| 4995816 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 69.0 | 6.67e-01 | 100.0% | 91.6% |
| 3968971 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.74 | 55.0 | 5.49e-01 | 97.7% | 75.6% |
| 3944005 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.73 | 53.0 | 4.55e-01 | 100.0% | 48.9% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.73 | 57.0 | 5.06e-01 | 86.0% | 59.2% |
| 3974369 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 59.0 | 6.00e-01 | 100.0% | 88.2% |
| 3944430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 65.0 | 6.12e-01 | 100.0% | 84.8% |
| 4991187 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 55.0 | 5.30e-01 | 98.8% | 72.6% |
| 3970830 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 64.0 | 6.09e-01 | 100.0% | 84.0% |
| 3971461 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 54.0 | 5.31e-01 | 97.7% | 75.6% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 66.0 | 6.12e-01 | 100.0% | 92.4% |
| 3166182 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.71 | 52.0 | 5.15e-01 | 100.0% | 73.3% |
| 3590201 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 60.0 | 5.51e-01 | 90.7% | 94.4% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.70 | 58.0 | 4.73e-01 | 91.9% | 79.3% |
| 4565791 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.69 | 53.0 | 5.22e-01 | 100.0% | 76.7% |
| 3949052 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 51.0 | 5.09e-01 | 98.8% | 74.4% |
| 4602848 | 1.1.7.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding | 0.68 | 47.0 | 4.70e-01 | 100.0% | 68.9% |
| 3473588 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 43.0 | 4.21e-01 | 70.9% | 58.9% |
| 3967199 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 56.0 | 5.23e-01 | 100.0% | 73.3% |
| 4131100 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.67 | 54.0 | 4.61e-01 | 86.0% | 59.3% |
| 3702149 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 53.0 | 4.33e-01 | 86.0% | 59.4% |
| 4031177 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.64 | 53.0 | 3.94e-01 | 95.3% | 35.5% |
| None | — | 0.64 | 53.0 | 3.91e-01 | 95.3% | 35.7% | |
| 4387060 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.64 | 53.0 | 3.89e-01 | 95.3% | 34.9% |
| 4247805 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.64 | 52.0 | 3.87e-01 | 95.3% | 35.5% |
| 3946710 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 55.0 | 4.93e-01 | 95.3% | 69.2% |
| 4267752 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.63 | 45.0 | 4.44e-01 | 97.7% | 69.5% |
| 4970832 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.63 | 43.0 | 3.78e-01 | 70.9% | 95.2% |
| 4036849 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 52.0 | 4.54e-01 | 91.9% | 68.4% |
| 3965428 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.62 | 51.0 | 4.80e-01 | 100.0% | 73.3% |
| 3974575 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 51.0 | 4.92e-01 | 95.3% | 77.6% |
| 4956728 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.62 | 43.0 | 3.71e-01 | 70.9% | 95.4% |
| 4050380 | 1.1.7.95 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25990 | 0.62 | 51.0 | 4.93e-01 | 97.7% | 78.9% |
| 3556801 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.62 | 42.0 | 3.75e-01 | 70.9% | 95.2% |
| 3792089 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.62 | 42.0 | 3.64e-01 | 70.9% | 94.8% |
| 3947204 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.62 | 56.0 | 4.82e-01 | 98.8% | 70.0% |
| 4466667 | 1.1.7.95 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25990 | 0.61 | 54.0 | 4.94e-01 | 97.7% | 77.4% |
| 3988580 | 1.1.7.95 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25990 | 0.61 | 54.0 | 5.02e-01 | 100.0% | 77.3% |
| 3491434 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.60 | 41.0 | 3.59e-01 | 70.9% | 98.5% |
| None | — | 0.60 | 55.0 | 4.96e-01 | 100.0% | 74.8% | |
| 3786933 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.60 | 41.0 | 3.63e-01 | 70.9% | 96.8% |
| 3971757 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 55.0 | 4.87e-01 | 100.0% | 79.2% |
| 3426699 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 52.0 | 4.61e-01 | 100.0% | 67.5% |
| 4010415 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 54.0 | 4.48e-01 | 100.0% | 58.6% |
| 3386975 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 54.0 | 4.88e-01 | 100.0% | 80.9% |
| 4629425 | 11.1.1.1369 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1410 | 0.58 | 43.0 | 4.16e-01 | 84.9% | 70.5% |
| 1096110 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.58 | 49.0 | 3.64e-01 | 93.0% | 40.3% |
| None | — | 0.57 | 48.0 | 3.64e-01 | 93.0% | 39.4% | |
| 2526961 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.57 | 48.0 | 3.60e-01 | 93.0% | 39.4% |
| 4938551 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.57 | 49.0 | 4.88e-01 | 100.0% | 92.2% |
| 5011498 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 42.0 | 4.22e-01 | 100.0% | 77.5% |
| 3261290 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.55 | 42.0 | 3.82e-01 | 84.9% | 59.2% |
| 3220081 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.53 | 40.0 | 2.95e-01 | 84.9% | 36.3% |
| 3277088 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 4.09e-01 | 83.7% | 97.3% |
| 4214918 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.50 | 41.0 | 3.06e-01 | 91.9% | 57.1% |
D4
high
residues 327-451
Domain cluster:
rep: NC_041949.1__YP_009603225.1__FDH66_gp61__00037__D5-161
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05257.23 best | CHAP | 47.6 | 2.70e-12 | 76.0% | 96.3% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.88 | 84.0 | 7.51e-01 | 100.0% | 93.3% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.82 | 77.0 | 6.29e-01 | 100.0% | 69.5% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.78 | 73.0 | 5.96e-01 | 99.2% | 78.0% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.78 | 72.0 | 6.26e-01 | 99.2% | 94.1% |
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.74 | 65.0 | 6.62e-01 | 99.2% | 95.9% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.66 | 56.0 | 5.54e-01 | 91.2% | 97.7% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 32.0 | 4.45e-01 | 72.8% | 93.8% |
| 6ijfC01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.66 | 44.0 | 4.98e-01 | 100.0% | 91.4% |
| 4hffA00 | 3.90.1720.70 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.65 | 59.0 | 5.54e-01 | 100.0% | 94.2% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.65 | 31.0 | 4.29e-01 | 99.2% | 94.9% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.64 | 29.0 | 4.17e-01 | 75.2% | 100.0% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 55.0 | 5.33e-01 | 95.2% | 90.8% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 49.0 | 4.91e-01 | 84.8% | 84.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 35.0 | 4.27e-01 | 80.8% | 93.2% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 33.0 | 4.37e-01 | 96.8% | 100.0% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 32.0 | 3.89e-01 | 99.2% | 84.8% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 31.0 | 3.86e-01 | 72.0% | 88.0% |
| 2kgtA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 30.0 | 3.64e-01 | 76.0% | 100.0% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030940 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.90 | 87.0 | 7.94e-01 | 100.0% | 89.7% |
| 3716073 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.79 | 73.0 | 6.09e-01 | 98.4% | 86.8% |
| 3702189 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.79 | 72.0 | 6.00e-01 | 98.4% | 91.4% |
| 3598532 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.78 | 72.0 | 6.06e-01 | 99.2% | 89.3% |
| 3615154 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.78 | 72.0 | 6.26e-01 | 98.4% | 93.5% |
| 5037849 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.67 | 44.0 | 4.50e-01 | 84.0% | 68.0% |
| 4987744 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.66 | 44.0 | 4.29e-01 | 83.2% | 62.2% |
| 3587337 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.66 | 43.0 | 4.08e-01 | 84.0% | 55.3% |
| 4938445 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.65 | 43.0 | 4.21e-01 | 83.2% | 62.2% |
| 3393319 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 42.0 | 4.45e-01 | 91.2% | 75.5% |
| 4958339 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.63 | 44.0 | 4.71e-01 | 83.2% | 81.8% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 37.0 | 4.20e-01 | 89.6% | 80.0% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 37.0 | 4.35e-01 | 88.8% | 90.0% |
| 4679625 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 30.0 | 4.14e-01 | 76.0% | 96.7% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 40.0 | 4.53e-01 | 95.2% | 91.1% |
| 3244430 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 43.0 | 4.59e-01 | 100.0% | 85.7% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 38.0 | 4.36e-01 | 96.0% | 87.8% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 39.0 | 4.51e-01 | 88.8% | 95.3% |
| 3840679 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 40.0 | 4.41e-01 | 93.6% | 89.5% |
| 4583705 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.59 | 52.0 | 4.06e-01 | 100.0% | 99.3% |
| 3999725 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 36.0 | 4.27e-01 | 87.2% | 90.6% |
| 3938389 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 37.0 | 4.36e-01 | 90.4% | 95.3% |
| 3765274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 38.0 | 4.33e-01 | 90.4% | 93.3% |
| 3547106 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 38.0 | 4.32e-01 | 90.4% | 93.3% |
| 3845425 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 37.0 | 4.26e-01 | 90.4% | 92.2% |
| 3576438 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 39.0 | 4.39e-01 | 91.2% | 96.7% |
| 5054196 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.57 | 45.0 | 4.20e-01 | 83.2% | 71.3% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 37.0 | 4.24e-01 | 90.4% | 95.3% |
| 3881124 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 36.0 | 4.19e-01 | 89.6% | 91.1% |
| 4992755 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.56 | 38.0 | 4.32e-01 | 73.6% | 95.6% |
| 3727542 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 32.0 | 3.68e-01 | 92.0% | 84.4% |
| 3520654 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.51 | 35.0 | 3.35e-01 | 71.2% | 86.7% |