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OL744220.1__UNA04155.1__X__00277
Bact-VirOL744220.1__UNA04155.1__X__00277
Identity
- Accession:
- OL744220 ↗
- Kingdom:
- phage
Quality
78.2
mean pLDDT
Taxonomy
TaxID: 2912652
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 69-103_160-253
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08719.18 best | NADAR | 46.0 | 9.60e-12 | 70.5% | 46.0% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8bauA01 | 1.10.357.40 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › YbiA-like | 0.87 | 72.0 | 6.30e-01 | 86.0% | 100.0% |
| 4zb7A00 | 1.20.1050.130 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 34.0 | 3.11e-01 | 99.2% | 45.6% |
| 3ls1A00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.51 | 31.0 | 3.16e-01 | 83.7% | 59.4% |
| 1x5bA01 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 32.0 | 3.20e-01 | 89.1% | 59.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3972372 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.90 | 74.0 | 6.45e-01 | 84.5% | 92.2% |
| 3230388 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.87 | 82.0 | 6.92e-01 | 97.7% | 96.4% |
| 3230342 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.87 | 84.0 | 6.88e-01 | 100.0% | 93.8% |
| 3789927 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.87 | 81.0 | 7.06e-01 | 96.9% | 100.0% |
| 3212620 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.86 | 73.0 | 6.15e-01 | 86.8% | 96.4% |
| 3180309 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.85 | 76.0 | 6.40e-01 | 93.0% | 97.5% |
| 3999784 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.82 | 70.0 | 6.01e-01 | 88.4% | 100.0% |
| 3514155 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.78 | 66.0 | 5.91e-01 | 88.4% | 100.0% |
| 3518372 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.78 | 67.0 | 5.78e-01 | 88.4% | 100.0% |
| 3600506 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.78 | 64.0 | 6.06e-01 | 85.3% | 99.3% |
| 3514154 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.78 | 63.0 | 5.75e-01 | 84.5% | 100.0% |
| 3515138 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.77 | 62.0 | 5.40e-01 | 84.5% | 100.0% |
| 4018277 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.77 | 65.0 | 5.68e-01 | 87.6% | 100.0% |
| 3998019 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.75 | 69.0 | 6.09e-01 | 96.9% | 96.1% |
| 3514172 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.71 | 58.0 | 5.26e-01 | 84.5% | 95.2% |
| 4985667 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 37.0 | 3.21e-01 | 72.1% | 68.9% |
D2
medium
residues 104-159
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08719.18 best | NADAR | 50.1 | 5.30e-13 | 100.0% | 33.1% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8bauA01 | 1.10.357.40 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › YbiA-like | 0.93 | 88.0 | 5.89e-01 | 100.0% | 32.0% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.83 | 62.0 | 6.27e-01 | 78.6% | 96.4% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.81 | 57.0 | 5.12e-01 | 73.2% | 84.2% |
| 8etcb01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.80 | 59.0 | 4.30e-01 | 78.6% | 68.5% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.78 | 57.0 | 4.99e-01 | 78.6% | 90.2% |
| 1gjsA00 | 1.10.8.40 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain | 0.77 | 57.0 | 5.44e-01 | 78.6% | 70.8% |
| 2ougA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.67 | 51.0 | 3.79e-01 | 82.1% | 75.2% |
| 3l9vC00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 54.0 | 3.91e-01 | 100.0% | 59.7% |
| 4oa3A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.61 | 44.0 | 3.34e-01 | 78.6% | 85.1% |
| 1zu0A03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.61 | 48.0 | 3.20e-01 | 89.3% | 29.3% |
| 2lklA01 | 1.10.1900.40 | Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › Acidic terminal segments, variant surface antigen of PfEMP1 | 0.57 | 40.0 | 3.70e-01 | 73.2% | 87.5% |
| 2pusA05 | 1.10.1740.80 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.56 | 41.0 | 3.84e-01 | 85.7% | 73.8% |
| 2x1lA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.56 | 40.0 | 2.93e-01 | 78.6% | 84.3% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 39.0 | 3.00e-01 | 78.6% | 56.6% |
| 2ebiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 36.0 | 3.52e-01 | 71.4% | 71.2% |
| 3qtgA03 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.53 | 39.0 | 3.14e-01 | 80.4% | 96.5% |
| 3w2zA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.53 | 38.0 | 2.74e-01 | 80.4% | 93.3% |
| 2mh3A00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.52 | 36.0 | 3.47e-01 | 76.8% | 61.4% |
| 3cxbA01 | 3.30.2440.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA | 0.52 | 43.0 | 3.55e-01 | 100.0% | 53.0% |
| 3gehA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.51 | 37.0 | 2.75e-01 | 80.4% | 51.5% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3279758 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.99 | 96.0 | 6.65e-01 | 100.0% | 37.6% |
| 3972372 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.99 | 95.0 | 6.32e-01 | 100.0% | 31.3% |
| 3180309 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.98 | 94.0 | 6.08e-01 | 100.0% | 30.0% |
| 4018277 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.97 | 93.0 | 6.20e-01 | 100.0% | 32.2% |
| 3616731 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.97 | 93.0 | 6.40e-01 | 100.0% | 35.4% |
| 3797441 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.97 | 93.0 | 6.45e-01 | 100.0% | 36.6% |
| 3185713 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.96 | 90.0 | 6.75e-01 | 98.2% | 47.5% |
| 3998019 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.94 | 88.0 | 5.93e-01 | 100.0% | 31.1% |
| 3789927 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.94 | 88.0 | 5.90e-01 | 100.0% | 31.1% |
| 3797531 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.94 | 87.0 | 7.27e-01 | 100.0% | 62.2% |
| 4835580 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.93 | 88.0 | 6.17e-01 | 100.0% | 38.4% |
| 3230388 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.92 | 86.0 | 5.68e-01 | 100.0% | 29.7% |
| 3230342 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.92 | 86.0 | 5.59e-01 | 100.0% | 28.1% |
| 4034270 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.84 | 60.0 | 5.25e-01 | 75.0% | 91.3% |
| 3212620 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.83 | 74.0 | 5.04e-01 | 100.0% | 32.3% |
| 4038003 | 632.2.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › GA-like | 0.82 | 61.0 | 5.54e-01 | 80.4% | 66.7% |
| 2806489 | 632.19.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › RICH | 0.78 | 57.0 | 4.98e-01 | 78.6% | 83.5% |
| 4821793 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.73 | 53.0 | 5.40e-01 | 78.6% | 90.7% |
| 3599979 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.70 | 49.0 | 3.68e-01 | 75.0% | 50.0% |
| 4927256 | 7582.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 | 0.68 | 54.0 | 3.79e-01 | 92.9% | 27.4% |
| 3385960 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.67 | 51.0 | 3.41e-01 | 85.7% | 55.1% |
| 4250891 | 301.8.1.3 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › AASDHPPT_N | 0.66 | 52.0 | 4.23e-01 | 89.3% | 89.6% |
| 3429343 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.66 | 50.0 | 3.69e-01 | 87.5% | 46.1% |
| 3572981 | 6006.1.1.5 ↗ | extended segments › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › PF28463 | 0.55 | 42.0 | 3.75e-01 | 92.9% | 80.0% |
| 4022495 | 312.1.1.7 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › ATP_transf | 0.53 | 41.0 | 3.07e-01 | 91.1% | 73.5% |
| 4194508 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.51 | 36.0 | 3.68e-01 | 75.0% | 78.2% |