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OL774871.1__UJD17839.1__MissB1_0014__00014

Bact-Vir

OL774871.1__UJD17839.1__MissB1_0014__00014

Identity

Accession:
OL774871 ↗
Kingdom:
phage

Quality

86.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_MissB1

TaxID: 2911154

Cluster

View cluster (81 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 121-185
PDB
Domain cluster: rep: MK448737.1__QBX17433.1__Javan351_0049__00049__D125-186
D2 high residues 221-276
PDB
Domain cluster: rep: ON453900.1__WAK79511.1__X__00087__D221-271
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k28D04 3.30.1920.40 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › 0.68 50.0 4.85e-01 80.4% 81.2%
1wruA03 3.30.1920.10 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold 0.66 53.0 5.39e-01 92.9% 100.0%
3uh0A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.61 46.0 3.74e-01 87.5% 100.0%
2qyvA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.61 48.0 3.22e-01 92.9% 75.8%
1k8kA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 45.0 3.60e-01 91.1% 90.2%
4hwiB01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 34.0 3.24e-01 71.4% 46.5%
3mcpA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 40.0 2.72e-01 83.9% 86.7%
2ivdA02 3.90.660.20 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › Protoporphyrinogen oxidase, mitochondrial; domain 2 0.53 44.0 3.10e-01 94.6% 60.9%
3lp5A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 40.0 2.81e-01 94.6% 93.2%
1o5wB02 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.51 39.0 2.85e-01 85.7% 67.2%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5059552 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.65 47.0 2.92e-01 78.6% 73.0%
4981861 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.64 50.0 3.05e-01 85.7% 78.4%
3953200 2003.1.2.49 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 0.63 49.0 3.10e-01 89.3% 82.9%
5033227 2003.1.2.300 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat 0.62 48.0 3.03e-01 83.9% 89.0%
4956140 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.60 47.0 2.94e-01 91.1% 75.8%
3885139 221.1.1.153 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_PRKD1_N 0.59 38.0 3.29e-01 73.2% 40.0%
3283731 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.59 44.0 2.70e-01 83.9% 76.0%
3799364 223.2.1.4 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.57 43.0 3.12e-01 87.5% 68.4%
5007616 7534.1.1.1 ↗ a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf 0.56 41.0 3.08e-01 87.5% 92.8%
3613677 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 44.0 2.89e-01 87.5% 93.5%
3935790 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.54 38.0 3.13e-01 76.8% 74.5%
4237788 2007.1.3.46 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PF29871 0.53 45.0 3.46e-01 100.0% 42.1%
4989698 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.52 35.0 2.98e-01 71.4% 68.6%
3923184 5.1.4.16 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.52 31.0 1.89e-01 100.0% 7.3%
3268145 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.50 39.0 3.28e-01 91.1% 50.9%
D3 medium residues 1-120_186-199
PDB
Domain cluster: rep: OQ326496.2__WDQ45522.1__X__00066__D7-128