Back to structures

OL774877.1__UJH95051.1__MissG1_0001__00001

Bact-Vir

OL774877.1__UJH95051.1__MissG1_0001__00001

Identity

Accession:
OL774877 ↗
Kingdom:
phage

Quality

94.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-139
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05257.23 best CHAP 41.7 1.80e-10 67.2% 97.5%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4cshA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.82 78.0 7.24e-01 100.0% 95.7%
4hz9A00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.74 59.0 6.30e-01 100.0% 96.6%
2k1gA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.72 60.0 6.20e-01 100.0% 93.0%
4hffA00 3.90.1720.70 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.60 55.0 5.28e-01 100.0% 96.1%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 31.0 4.13e-01 72.3% 93.2%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 47.0 4.34e-01 98.5% 93.1%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4796282 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.87 67.0 7.47e-01 80.3% 98.2%
4034059 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.86 82.0 8.04e-01 100.0% 96.6%
2141406 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.85 77.0 7.80e-01 100.0% 94.8%
1293874 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.82 78.0 7.23e-01 100.0% 95.2%
2990058 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.74 70.0 5.49e-01 100.0% 65.4%
3931783 1.1.7.41 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.50 30.0 3.51e-01 90.5% 84.2%
3704929 4.18.1.1 beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.50 36.0 3.51e-01 73.0% 69.3%
D2 medium residues 148-287
PDB
Pfam (7)
AccessionNameScoreE-valueQ covHMM cov
PF19127.7 best Choline_bind_3 68.2 6.60e-19 32.9% 100.0%
PF19127.7 Choline_bind_3 30.3 4.60e-07 30.7% 87.2%
PF01473.27 Choline_bind_1 14.4 5.70e-02 15.0% 73.7%
PF01473.27 Choline_bind_1 16.5 1.20e-02 14.3% 79.0%
PF01473.27 Choline_bind_1 15.0 3.50e-02 13.6% 94.7%
PF01473.27 Choline_bind_1 29.4 1.00e-06 13.6% 100.0%
PF01473.27 Choline_bind_1 20.7 5.50e-04 13.6% 84.2%