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OL828290.1__ULA52297.1__X__00061
Bact-VirOL828290.1__ULA52297.1__X__00061
Identity
- Accession:
- OL828290 ↗
- Kingdom:
- phage
Quality
85.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Karamvirus›
Enterobacter_phage_vB-EclM_KMB19
TaxID: 2917963
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-86
Domain cluster:
rep: MN095771.1__QFR56020.1__CPT_Muldoon_064__00063__D7-81
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.76 | 51.0 | 4.58e-01 | 70.4% | 50.5% |
| 1cbfA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.74 | 44.0 | 3.79e-01 | 75.3% | 39.7% |
| 1vwxS02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.72 | 50.0 | 5.21e-01 | 74.1% | 81.6% |
| 5utkA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 46.0 | 4.49e-01 | 91.4% | 61.1% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 49.0 | 4.77e-01 | 72.8% | 95.5% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.69 | 42.0 | 4.58e-01 | 70.4% | 74.2% |
| 4eq3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 50.0 | 4.49e-01 | 91.4% | 56.5% |
| 6usmB01 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.67 | 47.0 | 3.89e-01 | 72.8% | 92.5% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.67 | 47.0 | 4.80e-01 | 74.1% | 81.6% |
| 3v6oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 46.0 | 4.50e-01 | 91.4% | 66.7% |
| 2z3gB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.65 | 48.0 | 4.17e-01 | 95.1% | 50.4% |
| 3up1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 45.0 | 4.18e-01 | 91.4% | 58.7% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 44.0 | 4.20e-01 | 74.1% | 91.8% |
| 7y8sA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 44.0 | 4.22e-01 | 90.1% | 63.2% |
| 4p04A01 | 2.60.40.3100 | Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain | 0.62 | 43.0 | 3.95e-01 | 90.1% | 55.7% |
| 2hw4A01 | 3.50.20.20 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Janus/Ocnus | 0.61 | 49.0 | 4.49e-01 | 93.8% | 65.5% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.60 | 53.0 | 4.12e-01 | 97.5% | 64.5% |
| 1xffA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.59 | 50.0 | 3.63e-01 | 95.1% | 70.6% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.59 | 40.0 | 3.80e-01 | 70.4% | 95.8% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 50.0 | 4.20e-01 | 100.0% | 85.4% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 39.0 | 3.66e-01 | 72.8% | 56.1% |
| 4d0qA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 39.0 | 3.16e-01 | 71.6% | 54.0% |
| 4h3wA02 | 2.60.120.1260 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 46.0 | 3.74e-01 | 100.0% | 47.4% |
| 4faoC00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.56 | 36.0 | 3.75e-01 | 84.0% | 70.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.55 | 45.0 | 3.58e-01 | 90.1% | 93.4% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.55 | 45.0 | 4.34e-01 | 90.1% | 95.7% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.54 | 38.0 | 3.96e-01 | 96.3% | 79.2% |
| 3ir9A02 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.54 | 38.0 | 3.38e-01 | 75.3% | 70.8% |
| 1djsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.49e-01 | 90.1% | 57.8% |
| 1ci0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 45.0 | 3.43e-01 | 96.3% | 77.0% |
| 5h4eA01 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.53 | 45.0 | 3.36e-01 | 98.8% | 92.6% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 42.0 | 3.98e-01 | 90.1% | 72.9% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.53 | 46.0 | 4.07e-01 | 97.5% | 66.4% |
| 2nytD00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 45.0 | 3.57e-01 | 100.0% | 48.6% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.52 | 44.0 | 3.70e-01 | 100.0% | 79.6% |
| 1iowA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 40.0 | 3.27e-01 | 82.7% | 82.6% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.51 | 35.0 | 3.08e-01 | 72.8% | 49.2% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.51 | 42.0 | 4.06e-01 | 91.4% | 94.7% |
| 3t91B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.51 | 42.0 | 3.12e-01 | 91.4% | 44.7% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1442393 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.75 | 52.0 | 4.75e-01 | 72.8% | 58.7% |
| 3411558 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.75 | 51.0 | 4.23e-01 | 70.4% | 50.7% |
| 5000510 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.73 | 51.0 | 5.32e-01 | 74.1% | 81.3% |
| 2106285 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.72 | 51.0 | 4.64e-01 | 74.1% | 57.4% |
| 4013514 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.72 | 51.0 | 4.74e-01 | 75.3% | 60.0% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.72 | 50.0 | 5.32e-01 | 72.8% | 90.0% |
| 4990637 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.72 | 50.0 | 5.05e-01 | 74.1% | 75.9% |
| 5074648 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.71 | 50.0 | 5.17e-01 | 74.1% | 82.7% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.71 | 50.0 | 5.17e-01 | 74.1% | 82.7% |
| 4654177 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.71 | 52.0 | 3.65e-01 | 77.8% | 95.9% |
| 5065436 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.70 | 48.0 | 5.22e-01 | 71.6% | 92.2% |
| 4088887 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.70 | 51.0 | 4.58e-01 | 98.8% | 56.4% |
| 4179371 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.69 | 51.0 | 3.59e-01 | 77.8% | 97.6% |
| 3743280 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.69 | 50.0 | 4.47e-01 | 100.0% | 53.9% |
| 3640841 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.69 | 54.0 | 3.45e-01 | 85.2% | 58.7% |
| 2831852 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.68 | 48.0 | 4.50e-01 | 74.1% | 61.4% |
| 4625721 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.68 | 48.0 | 4.25e-01 | 74.1% | 53.4% |
| 4983090 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.68 | 47.0 | 4.78e-01 | 72.8% | 79.7% |
| 4033537 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.66 | 48.0 | 3.50e-01 | 77.8% | 95.7% |
| 5035636 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.66 | 46.0 | 4.34e-01 | 74.1% | 90.0% |
| 4015747 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.65 | 47.0 | 3.29e-01 | 76.5% | 52.0% |
| 5007807 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.65 | 45.0 | 4.35e-01 | 74.1% | 92.6% |
| 4219489 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.64 | 48.0 | 3.30e-01 | 79.0% | 37.1% |
| 3230319 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.61 | 42.0 | 4.31e-01 | 75.3% | 72.5% |
| 3285401 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.61 | 51.0 | 5.28e-01 | 100.0% | 98.7% |
| 4648475 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.60 | 42.0 | 4.68e-01 | 98.8% | 96.7% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.59 | 40.0 | 4.31e-01 | 70.4% | 87.7% |
| 184690 | 11.22.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Dispersin › Dispersin › CellEnv_BiogenAssoc | 0.58 | 39.0 | 3.66e-01 | 72.8% | 56.1% |
| 3832339 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.58 | 51.0 | 4.18e-01 | 100.0% | 71.6% |
| 3414928 | 382.1.1.6 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR | 0.58 | 39.0 | 3.90e-01 | 86.4% | 65.9% |
| 5032056 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 45.0 | 4.13e-01 | 84.0% | 90.3% |
| 4031235 | 3986.2.1.2 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › DUF2922 | 0.57 | 45.0 | 4.74e-01 | 91.4% | 98.6% |
| 4015453 | 212.1.1.12 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › UPF0029 | 0.56 | 43.0 | 3.68e-01 | 81.5% | 61.5% |
| 3600531 | 4012.3.1.0 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 | 0.56 | 36.0 | 4.15e-01 | 84.0% | 100.0% |
| 4418109 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.54 | 49.0 | 4.06e-01 | 100.0% | 59.4% |
| 3784847 | 11.1.1.378 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rgp1 | 0.54 | 45.0 | 3.55e-01 | 91.4% | 54.7% |
| 3514371 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.52 | 46.0 | 3.41e-01 | 100.0% | 52.1% |
| 3222254 | 304.9.1.40 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › BRAP2 | 0.52 | 37.0 | 3.30e-01 | 75.3% | 71.4% |
| 4644377 | 223.1.1.122 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HisKA | 0.51 | 42.0 | 2.97e-01 | 88.9% | 68.2% |
| 5033505 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.80e-01 | 90.1% | 67.3% |
| 3219557 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.51 | 34.0 | 3.72e-01 | 75.3% | 93.3% |
| 3279732 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.51 | 37.0 | 3.29e-01 | 76.5% | 73.9% |