←Back to structures
OL828290.1__ULA52453.1__X__00217
Bact-VirOL828290.1__ULA52453.1__X__00217
Identity
- Accession:
- OL828290 ↗
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Karamvirus›
Enterobacter_phage_vB-EclM_KMB19
TaxID: 2917963
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-96
Domain cluster:
rep: NC_042047.1__YP_009616004.1__FDI76_gp192__00094__D1-76
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.64 | 40.0 | 3.83e-01 | 73.2% | 53.8% |
| 2a10D00 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.62 | 40.0 | 3.77e-01 | 72.0% | 52.9% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 41.0 | 3.37e-01 | 72.0% | 65.2% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.59 | 41.0 | 3.54e-01 | 73.2% | 59.6% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.58 | 51.0 | 4.34e-01 | 100.0% | 59.3% |
| 2ip2A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 40.0 | 2.85e-01 | 72.0% | 40.7% |
| 3dp7A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 40.0 | 3.20e-01 | 73.2% | 93.3% |
| 4evuB00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.56 | 43.0 | 4.61e-01 | 85.4% | 100.0% |
| 4dplA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 39.0 | 3.14e-01 | 74.4% | 87.4% |
| 1jsxA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 39.0 | 3.05e-01 | 74.4% | 73.1% |
| 1uwkB01 | 3.40.1770.10 | Alpha Beta › 3-Layer(aba) Sandwich › Urocanase fold › Urocanase superfamily | 0.56 | 47.0 | 3.23e-01 | 100.0% | 73.6% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 39.0 | 3.12e-01 | 74.4% | 89.1% |
| 3i9fB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 39.0 | 3.10e-01 | 74.4% | 87.0% |
| 1vq8S00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 37.0 | 3.76e-01 | 74.4% | 70.4% |
| 2w1kA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.55 | 47.0 | 3.59e-01 | 98.8% | 70.7% |
| 4q97A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.47e-01 | 73.2% | 69.4% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.53 | 42.0 | 3.84e-01 | 85.4% | 81.7% |
| 2w1jA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.53 | 46.0 | 3.54e-01 | 98.8% | 77.4% |
| 2jysA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.53 | 37.0 | 3.63e-01 | 89.0% | 65.9% |
| 5k9aA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.53 | 46.0 | 3.46e-01 | 98.8% | 73.0% |
| 1pfoA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.53 | 31.0 | 3.56e-01 | 98.8% | 84.9% |
| 2jnaA01 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.53 | 39.0 | 4.10e-01 | 80.5% | 100.0% |
| 3md7A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 39.0 | 2.74e-01 | 93.9% | 24.1% |
| 6v6aC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 38.0 | 3.79e-01 | 76.8% | 100.0% |
| 3ehgA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 45.0 | 3.90e-01 | 100.0% | 61.6% |
| 2m2jA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.52 | 40.0 | 4.22e-01 | 85.4% | 100.0% |
| 3mwbA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 36.0 | 3.48e-01 | 72.0% | 76.0% |
| 3luyA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 36.0 | 3.30e-01 | 74.4% | 63.8% |
| 4q9cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 36.0 | 3.38e-01 | 73.2% | 69.5% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.52 | 41.0 | 3.13e-01 | 85.4% | 39.8% |
| 2qmwA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 34.0 | 3.36e-01 | 70.7% | 74.2% |
| 1np6B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 45.0 | 3.80e-01 | 100.0% | 88.2% |
| 2jz7A00 | 3.30.1660.30 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Selenium-binding protein | 0.50 | 39.0 | 3.99e-01 | 87.8% | 88.9% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3946670 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.76 | 68.0 | 4.68e-01 | 100.0% | 89.1% |
| 4929755 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.72 | 64.0 | 4.42e-01 | 100.0% | 95.3% |
| 3693414 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.66 | 47.0 | 3.32e-01 | 75.6% | 26.3% |
| 4017737 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.66 | 47.0 | 3.13e-01 | 75.6% | 20.9% |
| 4951750 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.65 | 45.0 | 3.21e-01 | 72.0% | 61.2% |
| 4554410 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.63 | 43.0 | 2.62e-01 | 70.7% | 55.9% |
| 3591080 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 41.0 | 4.23e-01 | 75.6% | 72.5% |
| 5018751 | 2003.1.5.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 | 0.60 | 42.0 | 3.00e-01 | 73.2% | 73.3% |
| 5044561 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.60 | 42.0 | 4.28e-01 | 73.2% | 96.2% |
| 3651303 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.60 | 36.0 | 4.09e-01 | 72.0% | 81.7% |
| 3396197 | 2003.1.5.100 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF938 | 0.59 | 40.0 | 3.00e-01 | 70.7% | 87.1% |
| 4081025 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.59 | 42.0 | 2.97e-01 | 75.6% | 40.4% |
| 5064952 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.59 | 41.0 | 4.26e-01 | 72.0% | 100.0% |
| 5049188 | 872.5.1.1 ↗ | a+b two layers › Dodecin subunit-like › D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain › D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain › OAM_dimer | 0.58 | 40.0 | 4.06e-01 | 70.7% | 77.5% |
| 4948363 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.58 | 41.0 | 3.28e-01 | 75.6% | 82.9% |
| 3655967 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 38.0 | 3.66e-01 | 73.2% | 57.9% |
| 4973504 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.57 | 41.0 | 3.33e-01 | 76.8% | 91.5% |
| 3704224 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.57 | 43.0 | 4.13e-01 | 80.5% | 71.6% |
| 3941853 | 872.4.1.1 ↗ | a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like › YdgH_BhsA-like | 0.56 | 43.0 | 4.24e-01 | 84.1% | 75.6% |
| 3999840 | 2003.1.5.45 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_8 | 0.56 | 39.0 | 2.80e-01 | 73.2% | 54.0% |
| 3949255 | 872.4.1.1 ↗ | a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like › YdgH_BhsA-like | 0.56 | 44.0 | 4.36e-01 | 86.6% | 88.2% |
| 3196501 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.55 | 39.0 | 2.66e-01 | 73.2% | 61.4% |
| 3977288 | 872.4.1.1 ↗ | a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like › YdgH_BhsA-like | 0.55 | 42.0 | 4.18e-01 | 82.9% | 82.4% |
| 4971722 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.55 | 37.0 | 2.90e-01 | 70.7% | 83.1% |
| 4409022 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.55 | 41.0 | 3.68e-01 | 81.7% | 85.8% |
| 3949253 | 872.4.1.1 ↗ | a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like › YdgH_BhsA-like | 0.54 | 44.0 | 4.42e-01 | 92.7% | 88.2% |
| 4961351 | 242.1.1.10 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › PF26411 | 0.54 | 37.0 | 3.44e-01 | 73.2% | 55.5% |
| 4008174 | 872.4.1.1 ↗ | a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like › YdgH_BhsA-like | 0.54 | 41.0 | 4.07e-01 | 85.4% | 77.8% |
| 4464001 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.53 | 37.0 | 3.37e-01 | 73.2% | 53.0% |
| 4279308 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.52 | 41.0 | 3.05e-01 | 85.4% | 41.4% |
| 4130731 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.52 | 36.0 | 3.01e-01 | 72.0% | 47.3% |
| 3954949 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.52 | 45.0 | 3.05e-01 | 100.0% | 51.2% |
| 4029188 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.52 | 42.0 | 4.31e-01 | 90.2% | 93.8% |
| 2411782 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.51 | 36.0 | 2.99e-01 | 73.2% | 43.9% |
| 4131458 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.51 | 40.0 | 2.91e-01 | 85.4% | 37.9% |
| 3652776 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 43.0 | 2.95e-01 | 98.8% | 53.1% |
| 3178011 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.51 | 35.0 | 3.00e-01 | 73.2% | 43.6% |
| 3244029 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.51 | 35.0 | 3.68e-01 | 74.4% | 84.0% |
| 4648999 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.50 | 39.0 | 2.91e-01 | 85.4% | 40.5% |