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OL829978.1__UMO76396.1__SEA_TOMAS_253__00207
Bact-VirOL829978.1__UMO76396.1__SEA_TOMAS_253__00207
Identity
- Accession:
- OL829978 ↗
- Kingdom:
- phage
Quality
64.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Stanwilliamsviridae›
Tomasvirus›
Streptomyces_phage_Tomas
TaxID: 2914443
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 73-131
Domain cluster:
rep: IMGVR_UViG_3300006598_000411-3300006598-Ga0079098_10275872__D17-65
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ecjA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 41.0 | 4.14e-01 | 71.2% | 72.4% |
| 2darA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.60 | 46.0 | 4.36e-01 | 84.7% | 93.1% |
| 2v4jB02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.58 | 48.0 | 3.54e-01 | 100.0% | 66.1% |
| 2r6iA01 | 3.30.2180.10 | Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like | 0.55 | 38.0 | 3.31e-01 | 100.0% | 45.8% |
| 4bnqB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.54 | 45.0 | 3.23e-01 | 94.9% | 59.9% |
| 5wb2B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 38.0 | 3.60e-01 | 76.3% | 83.6% |
| 2rowA01 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.54 | 42.0 | 4.06e-01 | 91.5% | 88.7% |
| 2jh1A01 | 3.90.640.70 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.51 | 34.0 | 2.99e-01 | 71.2% | 75.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3910642 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.74 | 52.0 | 5.60e-01 | 74.6% | 100.0% |
| 3940976 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.74 | 50.0 | 5.57e-01 | 71.2% | 100.0% |
| 3541495 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.72 | 51.0 | 5.52e-01 | 78.0% | 91.7% |
| 160952 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.68 | 49.0 | 4.62e-01 | 78.0% | 67.6% |
| 3489329 | 109.4.1.1164 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › zf-MYND | 0.68 | 51.0 | 3.43e-01 | 84.7% | 22.9% |
| 3283302 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.67 | 50.0 | 2.98e-01 | 81.4% | 83.3% |
| 3716024 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.65 | 45.0 | 2.79e-01 | 74.6% | 90.8% |
| 3066048 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.65 | 48.0 | 4.22e-01 | 81.4% | 54.9% |
| 3441017 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.64 | 44.0 | 4.20e-01 | 72.9% | 81.4% |
| 3433304 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 46.0 | 3.91e-01 | 81.4% | 52.4% |
| 3625637 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.62 | 47.0 | 4.99e-01 | 83.1% | 98.0% |
| 4030046 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 46.0 | 4.52e-01 | 81.4% | 73.8% |
| 3243705 | 377.1.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA | 0.62 | 46.0 | 4.88e-01 | 91.5% | 98.0% |
| 3747332 | 109.4.1.1164 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › zf-MYND | 0.62 | 45.0 | 2.80e-01 | 79.7% | 14.2% |
| 3845514 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.60 | 50.0 | 5.03e-01 | 96.6% | 100.0% |
| 3819552 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.59 | 42.0 | 4.35e-01 | 78.0% | 94.5% |
| 4940040 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.59 | 42.0 | 4.57e-01 | 86.4% | 100.0% |
| 4012820 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 42.0 | 3.13e-01 | 83.1% | 40.6% |
| 3826537 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.57 | 41.0 | 4.23e-01 | 76.3% | 94.5% |
| 3802006 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.56 | 44.0 | 4.40e-01 | 89.8% | 100.0% |
| 3575444 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 41.0 | 4.25e-01 | 94.9% | 98.0% |
| 3937641 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.52 | 40.0 | 4.09e-01 | 93.2% | 96.3% |
| 5078546 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.51 | 44.0 | 2.83e-01 | 100.0% | 98.1% |