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OL849997.1__UKH49544.1__X__00144

Bact-Vir

OL849997.1__UKH49544.1__X__00144

Identity

Accession:
OL849997 ↗
Kingdom:
phage

Quality

83.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Karamvirus› Enterobacter_phage_vB-EclM_KMB17

TaxID: 2911672

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-66
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 63.0 6.22e-01 100.0% 87.1%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 56.0 5.47e-01 100.0% 75.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 55.0 5.50e-01 94.8% 79.7%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 4.84e-01 100.0% 52.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 57.0 5.54e-01 100.0% 78.5%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.70 60.0 4.58e-01 100.0% 53.8%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 55.0 5.90e-01 96.6% 100.0%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 61.0 5.58e-01 100.0% 86.8%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.65 54.0 4.64e-01 96.6% 62.9%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 4.51e-01 100.0% 64.0%
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.61 52.0 5.23e-01 98.3% 96.6%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 47.0 2.85e-01 89.7% 56.8%
5i4nA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 43.0 3.81e-01 81.0% 91.3%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 51.0 4.59e-01 100.0% 70.2%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 46.0 3.31e-01 91.4% 70.2%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.46e-01 100.0% 72.7%
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 42.0 3.93e-01 82.8% 65.4%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 42.0 3.24e-01 82.8% 80.5%
4ae8D00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 46.0 3.37e-01 91.4% 61.2%
2fujA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 45.0 3.68e-01 91.4% 93.2%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.57 47.0 4.03e-01 100.0% 55.8%
4ae7A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 44.0 3.19e-01 91.4% 54.8%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 43.0 3.10e-01 91.4% 68.0%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.55 42.0 3.00e-01 86.2% 95.4%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.55 41.0 4.01e-01 84.5% 74.6%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 41.0 3.09e-01 84.5% 35.0%
3rd7A00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.54 42.0 2.78e-01 87.9% 32.7%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.54 44.0 3.24e-01 94.8% 73.0%
3dkzA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 42.0 3.42e-01 91.4% 80.0%
4qfwA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.53 42.0 2.80e-01 91.4% 40.7%
2ou5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 40.0 3.04e-01 91.4% 74.3%
1c8uA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 42.0 3.17e-01 91.4% 68.6%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.52 38.0 3.07e-01 79.3% 76.0%
3bbjA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.52 41.0 2.72e-01 91.4% 34.5%
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.52 42.0 3.52e-01 98.3% 95.8%
1z4vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 43.0 2.62e-01 100.0% 80.2%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 38.0 2.94e-01 82.8% 76.9%
3u0aA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.51 39.0 2.66e-01 87.9% 34.0%
3rqbA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.51 40.0 2.70e-01 91.4% 38.6%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 40.0 2.93e-01 100.0% 63.0%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.44e-01 96.6% 79.3%
4lqzA00 2.40.128.570 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 0.51 39.0 3.17e-01 91.4% 61.8%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.48e-01 98.3% 91.7%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.50 42.0 3.55e-01 100.0% 88.8%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4016602 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.77 67.0 5.08e-01 100.0% 78.3%
3780847 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.77 63.0 4.61e-01 100.0% 34.7%
3601070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.39e-01 98.3% 92.3%
3595169 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.27e-01 100.0% 90.0%
5027789 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.75 66.0 5.53e-01 100.0% 76.0%
3709279 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 65.0 5.63e-01 100.0% 70.0%
3257650 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 65.0 5.70e-01 100.0% 82.4%
3595833 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 66.0 5.54e-01 100.0% 65.3%
3689576 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 64.0 4.71e-01 100.0% 51.0%
3575865 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.72 60.0 5.59e-01 100.0% 74.3%
4220126 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 61.0 5.47e-01 100.0% 69.4%
3886139 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.70 60.0 5.77e-01 100.0% 84.6%
4022025 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.69 61.0 4.58e-01 100.0% 43.4%
3459099 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.69 61.0 5.04e-01 100.0% 67.6%
3501337 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.68 61.0 5.48e-01 100.0% 85.0%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 61.0 5.39e-01 100.0% 77.6%
3809831 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.67 58.0 4.54e-01 100.0% 58.5%
3296140 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.67 58.0 3.46e-01 100.0% 17.5%
3182025 4.1.1.475 ↗ beta barrels › SH3 › SH3 › SH3 › PF26640 0.67 57.0 4.46e-01 100.0% 49.6%
3356605 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 59.0 5.10e-01 100.0% 81.1%
3924377 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 51.0 5.20e-01 96.6% 92.7%
3588727 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 59.0 5.55e-01 98.3% 82.9%
5077969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 4.76e-01 98.3% 63.7%
3342304 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 57.0 4.22e-01 100.0% 55.5%
3721062 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.65 53.0 4.79e-01 94.8% 80.0%
3729666 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 4.67e-01 100.0% 55.5%
4004815 4.1.1.166 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2314 0.65 56.0 4.46e-01 100.0% 48.8%
3890362 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 51.0 4.86e-01 91.4% 85.7%
4026274 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 54.0 4.22e-01 100.0% 42.1%
3719783 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 54.0 4.72e-01 100.0% 78.7%
3804236 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 54.0 4.19e-01 100.0% 61.4%
3587906 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.62 53.0 4.86e-01 100.0% 76.2%
4278184 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.61 53.0 4.79e-01 100.0% 73.8%
3448975 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.60 52.0 5.04e-01 100.0% 89.2%
3926118 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.59 47.0 4.71e-01 93.1% 91.7%
3721787 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 51.0 4.55e-01 100.0% 78.8%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.64e-01 100.0% 81.3%
3175966 283.1.1.3 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase 0.59 43.0 3.44e-01 79.3% 54.6%
3594413 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 48.0 4.46e-01 98.3% 81.2%
3370313 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.58 46.0 3.47e-01 93.1% 58.8%
4539117 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.58 44.0 3.51e-01 93.1% 50.7%
3351841 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.58 46.0 3.68e-01 93.1% 75.2%
3951474 1.1.5.9 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C 0.58 45.0 3.17e-01 91.4% 64.5%
3654028 2.1.1.241 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rsm22 0.57 42.0 4.11e-01 82.8% 93.8%
None — 0.57 45.0 3.68e-01 91.4% 93.2%
3632911 243.3.1.49 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Saf4_Yju2 0.56 42.0 3.85e-01 86.2% 77.6%
3867207 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.56 46.0 4.09e-01 100.0% 64.2%
3301015 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 47.0 4.64e-01 100.0% 89.2%
3280741 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 45.0 3.53e-01 91.4% 60.0%
3942573 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 45.0 4.59e-01 100.0% 100.0%
3786518 4.8.1.18 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N 0.56 45.0 4.45e-01 94.8% 89.2%
3408419 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 45.0 2.57e-01 98.3% 12.4%
3792948 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 42.0 3.62e-01 93.1% 77.3%
3658750 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.54 43.0 3.54e-01 96.6% 76.8%
5063188 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.54 44.0 3.04e-01 93.1% 34.0%
3640540 5.1.4.97 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop 0.54 44.0 2.67e-01 100.0% 85.0%
5029975 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.53 44.0 3.74e-01 96.6% 80.0%
163634 1.1.5.30 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_oxase_2 0.53 40.0 3.04e-01 91.4% 74.3%
3490456 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.21e-01 93.1% 40.7%
3415399 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.51 40.0 2.81e-01 91.4% 39.1%
3469125 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.51 42.0 3.41e-01 100.0% 87.7%
3231705 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 44.0 3.68e-01 100.0% 81.0%