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OL944604.1__UKL14847.1__X__00016

Bact-Vir

OL944604.1__UKL14847.1__X__00016

Identity

Accession:
OL944604 ↗
Kingdom:
phage

Quality

87.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Erwinia_phage_Gungnir39

TaxID: 2910783

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-58
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 59.0 5.51e-01 94.1% 89.4%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 52.0 4.15e-01 84.3% 73.0%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 58.0 5.04e-01 98.0% 79.1%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 55.0 5.19e-01 94.1% 87.9%
5hk0B00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.67 53.0 4.27e-01 90.2% 79.4%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.67 58.0 4.71e-01 100.0% 54.5%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 5.13e-01 98.0% 87.0%
6dddH00 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.66 44.0 3.72e-01 70.6% 98.9%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 51.0 4.74e-01 84.3% 76.9%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 50.0 5.15e-01 86.3% 100.0%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 49.0 3.80e-01 84.3% 67.2%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 52.0 4.83e-01 92.2% 81.8%
1b23P03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 54.0 4.47e-01 96.1% 76.6%
4zciA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 53.0 4.35e-01 98.0% 87.1%
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.64 45.0 4.77e-01 80.4% 100.0%
1hskA01 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.62 53.0 4.01e-01 100.0% 72.4%
4dt4A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 41.0 4.02e-01 70.6% 78.9%
1jlxA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 45.0 3.49e-01 88.2% 100.0%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.60 37.0 3.42e-01 80.4% 47.0%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 43.0 4.12e-01 78.4% 88.7%
1d1nA00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 49.0 4.14e-01 100.0% 84.8%
1wdiA02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.60 43.0 3.95e-01 80.4% 56.2%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 47.0 3.69e-01 92.2% 74.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 52.0 4.69e-01 100.0% 75.3%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.56e-01 86.3% 94.3%
3kl9A02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.60 48.0 4.40e-01 96.1% 85.1%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.46e-01 88.2% 91.5%
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 43.0 3.71e-01 82.4% 82.4%
3mb5A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.59 46.0 4.41e-01 90.2% 96.8%
4gi3C00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.59 41.0 3.99e-01 82.4% 66.7%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 49.0 4.01e-01 100.0% 88.5%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 46.0 3.56e-01 94.1% 45.9%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.72e-01 100.0% 100.0%
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.58 49.0 4.38e-01 98.0% 78.1%
6nu7A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 41.0 2.57e-01 80.4% 40.5%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 39.0 3.17e-01 74.5% 61.6%
2yvsA01 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.57 48.0 3.78e-01 100.0% 86.0%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 44.0 3.59e-01 94.1% 60.5%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 46.0 3.59e-01 100.0% 71.8%
1mgpA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 43.0 3.10e-01 86.3% 36.8%
1o54A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.56 44.0 4.05e-01 92.2% 95.8%
3hu1A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.56 45.0 3.82e-01 98.0% 86.5%
2vpzA05 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.55 44.0 3.31e-01 98.0% 80.5%
1xeeA01 3.10.20.390 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Chemotaxis-inhibiting protein CHIPS 0.55 42.0 3.70e-01 88.2% 67.1%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.42e-01 82.4% 80.9%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 46.0 4.37e-01 100.0% 90.3%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 44.0 3.72e-01 100.0% 62.6%
4b6eB01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 43.0 3.03e-01 98.0% 26.2%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.54 41.0 3.19e-01 88.2% 93.2%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 42.0 3.52e-01 100.0% 100.0%
1i9gA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.52 39.0 3.80e-01 90.2% 98.4%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 42.0 3.53e-01 92.2% 74.0%
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 42.0 3.73e-01 100.0% 61.2%
2jysA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.52 39.0 3.36e-01 86.3% 84.6%
4hj1A01 2.60.98.50 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › 0.52 41.0 2.99e-01 94.1% 90.4%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 40.0 3.24e-01 98.0% 79.5%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4221708 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.72 57.0 5.23e-01 92.2% 90.0%
3514191 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.01e-01 100.0% 56.0%
3232582 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 58.0 4.85e-01 98.0% 71.6%
3934628 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 4.88e-01 100.0% 62.2%
4951779 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.66 44.0 3.43e-01 70.6% 49.2%
4988999 605.1.1.352 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PAS 0.66 44.0 2.91e-01 70.6% 25.2%
4423739 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.65 55.0 4.62e-01 100.0% 89.5%
4975334 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.65 44.0 3.18e-01 70.6% 47.6%
4977585 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.64 43.0 3.24e-01 70.6% 50.4%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.64 52.0 3.48e-01 92.2% 24.8%
4980677 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.63 42.0 3.28e-01 70.6% 55.8%
3408327 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 53.0 4.52e-01 100.0% 61.1%
4968952 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.63 43.0 3.24e-01 72.5% 50.8%
1489669 3934.1.1.1 ↗ a+b complex topology › Late protein H7 › Late protein H7 › Late protein H7 › Pox_H7 0.62 43.0 3.34e-01 80.4% 31.6%
3253267 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.49e-01 100.0% 84.7%
3253266 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.22e-01 100.0% 71.4%
3970821 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 49.0 4.14e-01 100.0% 83.8%
5062841 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.62 41.0 3.11e-01 70.6% 51.1%
3366414 1.1.7.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.62 49.0 4.00e-01 100.0% 76.5%
4937158 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 4.96e-01 100.0% 93.3%
4101587 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.61 50.0 4.10e-01 98.0% 73.3%
4004179 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.61 45.0 3.00e-01 82.4% 31.7%
5004039 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.61 41.0 3.17e-01 70.6% 55.2%
4055256 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 52.0 4.44e-01 100.0% 60.0%
4999858 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.61 42.0 2.79e-01 72.5% 30.9%
4988945 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.61 41.0 2.86e-01 70.6% 39.4%
4962502 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.60 40.0 3.15e-01 70.6% 45.6%
3973594 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 49.0 4.26e-01 100.0% 97.8%
3945528 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 50.0 4.43e-01 100.0% 87.5%
3909375 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.59 44.0 3.30e-01 82.4% 51.9%
3946851 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.59 40.0 2.95e-01 70.6% 38.7%
4347919 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.59 48.0 4.16e-01 100.0% 84.4%
4997261 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.59 42.0 3.46e-01 78.4% 60.0%
None — 0.59 39.0 2.73e-01 70.6% 29.2%
5021973 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.59 40.0 3.29e-01 72.5% 57.1%
4998983 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.59 44.0 2.51e-01 84.3% 22.2%
4950249 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.59 39.0 3.16e-01 70.6% 55.5%
4959275 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.59 40.0 2.81e-01 72.5% 32.4%
5060588 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.58 42.0 3.28e-01 80.4% 45.8%
4373113 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 49.0 3.98e-01 100.0% 87.6%
5070047 284.1.1.0 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.58 43.0 4.21e-01 86.3% 98.3%
2770320 219.1.1.39 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF1175 0.58 46.0 3.30e-01 100.0% 39.1%
3386201 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.58 44.0 3.16e-01 88.2% 62.9%
3879653 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.57 45.0 4.21e-01 94.1% 88.6%
4989532 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.57 38.0 3.05e-01 70.6% 51.3%
4110879 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.57 41.0 3.18e-01 82.4% 55.6%
3427234 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.56 48.0 3.14e-01 100.0% 38.8%
4977587 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 39.0 3.02e-01 72.5% 58.3%
4957161 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.56 40.0 3.25e-01 80.4% 50.9%
5050351 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.56 38.0 3.12e-01 70.6% 64.8%
3487656 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 40.0 3.45e-01 82.4% 80.0%
3967163 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.56 40.0 3.09e-01 80.4% 41.5%
4933942 1.1.1.8 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.56 42.0 3.37e-01 86.3% 80.9%
4207197 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 44.0 3.76e-01 100.0% 95.0%
4106342 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.54 39.0 3.40e-01 82.4% 84.4%
3999177 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.54 40.0 3.61e-01 82.4% 90.7%
3263950 11.1.1.843 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.54 41.0 3.09e-01 86.3% 63.7%
1298682 10.32.1.168 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › HA70_C 0.54 46.0 3.44e-01 100.0% 78.4%
3406730 11.1.1.430 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP-delta 0.52 42.0 3.15e-01 92.2% 56.4%
4958534 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 34.0 3.03e-01 70.6% 71.1%
3828636 11.10.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.51 41.0 3.16e-01 100.0% 92.9%
3788044 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.50 38.0 2.49e-01 84.3% 73.3%
4268152 10.10.1.0 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.50 38.0 3.04e-01 88.2% 51.7%