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OL955261.1__UIS25261.1__X__00061

Bact-Vir

OL955261.1__UIS25261.1__X__00061

Identity

Accession:
OL955261 ↗
Kingdom:
phage

Quality

84.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Erythrobacter_phage_vB_EliS-L02

TaxID: 2909139

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 91-180
PDB
Domain cluster: rep: MN094788.1__QDH83561.1__X__00171__D2-75
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wyhB04 1.20.1270.50 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain 0.64 47.0 4.59e-01 78.9% 97.0%
2w0gA00 1.20.58.610 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain 0.61 42.0 3.76e-01 72.2% 80.6%
4ex8A00 3.40.1790.10 Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain 0.60 43.0 2.97e-01 74.4% 57.5%
2p5tA00 1.10.8.130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.57 42.0 4.18e-01 76.7% 96.7%
3owaB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.57 41.0 3.35e-01 74.4% 66.9%
7e84A03 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 40.0 3.57e-01 76.7% 52.8%
5dqqA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 43.0 3.82e-01 81.1% 65.2%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.56 40.0 3.97e-01 74.4% 69.8%
3syvA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.55 49.0 3.54e-01 97.8% 91.4%
3mzvA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.53 40.0 2.75e-01 86.7% 23.0%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 41.0 3.01e-01 86.7% 34.3%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4009031 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.84 37.0 3.81e-01 84.4% 47.1%
4210642 3755.1.1.12 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › CheZ 0.67 39.0 3.47e-01 100.0% 40.0%
5077207 601.7.1.3 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › PaREP1 0.67 47.0 3.93e-01 73.3% 60.0%
3332282 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.66 56.0 4.00e-01 93.3% 35.8%
4420423 5094.1.1.1 ↗ a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.65 45.0 3.74e-01 72.2% 41.3%
4079949 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.63 48.0 3.46e-01 81.1% 39.6%
4029754 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.62 42.0 4.39e-01 71.1% 78.8%
4025221 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.59 42.0 3.44e-01 92.2% 41.2%
3386973 5086.1.1.84 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND 0.54 37.0 3.75e-01 70.0% 71.1%
D2 high residues 187-313
PDB
Domain cluster: rep: MW980063.1__QXV73701.1__X__00014__D5-142
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19474.5 best DUF6011 57.7 9.10e-16 28.3% 94.6%
D3 medium residues 52-87
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bx9A00 6.20.20.10 Special › Other non-globular › Chaperone, DNAj Protein; Chain A › 0.87 66.0 5.82e-01 100.0% 56.6%
2cttA01 2.10.230.10 Mainly Beta › Ribbon › Chaperone, DNAj Protein; Chain A › Heat shock protein DnaJ, cysteine-rich domain 0.75 65.0 5.30e-01 100.0% 100.0%
2vf8B02 1.20.1580.10 Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain 0.75 63.0 4.13e-01 100.0% 27.7%
4ejqB01 6.10.250.2530 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.54 38.0 3.87e-01 75.0% 62.9%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.51 36.0 2.59e-01 77.8% 20.3%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 36.0 2.74e-01 77.8% 56.4%
1w2wB00 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.50 35.0 2.30e-01 77.8% 17.3%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042568 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.90 73.0 6.28e-01 100.0% 58.2%
4929742 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.89 71.0 6.38e-01 100.0% 64.0%
4168529 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.88 74.0 5.07e-01 100.0% 28.7%
4396778 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.86 74.0 5.99e-01 100.0% 52.3%
4560617 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.86 72.0 7.37e-01 91.7% 100.0%
4060106 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.86 78.0 7.51e-01 100.0% 95.0%
4341103 67.1.1.4 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG, DnaJ_C 0.86 72.0 4.97e-01 100.0% 30.0%
3897146 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.85 70.0 6.06e-01 100.0% 60.0%
3814464 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.85 75.0 5.53e-01 100.0% 97.8%
4000324 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.85 76.0 5.86e-01 100.0% 56.0%
3816662 361.1.1.18 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › zf-AtTam37 0.84 75.0 6.46e-01 100.0% 70.9%
4317359 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.84 73.0 4.96e-01 100.0% 29.6%
3930601 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.84 71.0 5.07e-01 94.4% 100.0%
4531747 375.1.1.301 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DnaJ_CXXCXGXG 0.84 76.0 7.36e-01 100.0% 95.0%
3763851 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.84 74.0 5.69e-01 100.0% 67.5%
3405173 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.84 75.0 5.94e-01 100.0% 54.3%
4250770 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.84 75.0 5.93e-01 100.0% 55.7%
5004632 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.84 78.0 6.82e-01 100.0% 96.0%
3630008 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.84 72.0 5.96e-01 97.2% 93.7%
4592703 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.83 75.0 6.45e-01 100.0% 76.4%
3253984 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.83 71.0 5.70e-01 100.0% 50.0%
3702888 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.83 76.0 5.86e-01 100.0% 98.7%
3318682 361.1.1.4 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DUF5351 0.83 74.0 6.03e-01 100.0% 61.5%
3706455 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.83 74.0 5.16e-01 100.0% 39.1%
3654474 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.82 73.0 5.48e-01 100.0% 55.3%
4162763 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.81 72.0 5.74e-01 100.0% 60.0%
3540352 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.81 70.0 5.45e-01 97.2% 100.0%
3816323 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.79 69.0 5.85e-01 100.0% 76.7%
4657257 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 67.0 3.50e-01 100.0% 3.4%
3815072 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.78 67.0 5.90e-01 100.0% 81.8%
3666474 361.1.1.5 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › GRXCR1_C 0.73 62.0 5.83e-01 100.0% 80.0%
3432463 361.1.1.5 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › GRXCR1_C 0.73 61.0 5.28e-01 100.0% 81.7%
3832633 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.72 61.0 4.03e-01 100.0% 22.5%
3403576 375.1.1.316 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › GRXCR1-2_C 0.72 61.0 5.77e-01 100.0% 88.9%
3939638 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.57 41.0 3.00e-01 80.6% 44.7%
3907927 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.52 38.0 2.92e-01 77.8% 67.1%
4963030 103.2.1.1 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN 0.51 35.0 2.49e-01 75.0% 85.8%