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OL960030.2__WHS04470.1__vBAbaPP1_53__00053

Bact-Vir

OL960030.2__WHS04470.1__vBAbaPP1_53__00053

Identity

Accession:
OL960030 ↗
Kingdom:
phage

Quality

80.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Saclayvirus› Acinetobacter_phage_vB_AbaM_P1

TaxID: 2908714

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-119
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21821.4 best Dit_like 58.3 1.30e-15 83.9% 63.6%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2onfA01 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.61 37.0 3.60e-01 95.8% 53.0%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 32.0 3.62e-01 91.5% 67.0%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.59 28.0 3.52e-01 97.5% 76.6%
2v72A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 26.0 2.50e-01 100.0% 32.8%
5yuyA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.57 28.0 2.79e-01 91.5% 44.3%
2d7vB00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.55 35.0 3.25e-01 96.6% 48.4%
5mmjj00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.53 35.0 3.74e-01 93.2% 79.8%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2595159 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.73 52.0 4.59e-01 100.0% 51.8%
2674670 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.71 50.0 4.36e-01 100.0% 49.4%
4888726 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.69 48.0 4.30e-01 100.0% 51.2%
3943681 1.1.13.47 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.67 59.0 5.40e-01 100.0% 73.3%
5062396 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.66 53.0 4.99e-01 89.0% 71.4%
2471641 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.66 44.0 4.12e-01 100.0% 54.4%
3943316 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 51.0 4.60e-01 100.0% 61.3%
3988836 706.2.1.1 ↗ beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 0.64 25.0 3.39e-01 100.0% 66.7%
2832216 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.61 43.0 4.02e-01 100.0% 56.9%
3964955 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 51.0 4.59e-01 100.0% 65.6%
2471637 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.61 46.0 4.28e-01 100.0% 63.1%
4851773 1.1.13.69 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DTP-pb9_A-dom_N 0.58 34.0 4.24e-01 82.2% 100.0%
5074066 324.1.1.1 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.57 33.0 3.18e-01 95.8% 46.4%
4979007 324.1.1.1 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.56 33.0 3.18e-01 96.6% 47.9%
5065691 304.51.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related 0.51 32.0 3.26e-01 95.8% 62.5%