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OL960581.1__UIU28068.1__SA20RB_122__00122
Bact-VirOL960581.1__UIU28068.1__SA20RB_122__00122
Identity
- Accession:
- OL960581 ↗
- Kingdom:
- phage
Quality
85.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Tequatrovirus›
Escherichia_phage_vB_EcoM_SA20RB
TaxID: 2909738
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-34
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.79 | 55.0 | 4.01e-01 | 77.4% | 29.5% |
| 3mtuE00 | 1.20.5.400 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.69 | 60.0 | 4.70e-01 | 100.0% | 50.0% |
| 3ir4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.68 | 57.0 | 3.83e-01 | 100.0% | 49.2% |
| 1ps9A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.68 | 52.0 | 3.47e-01 | 100.0% | 20.0% |
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.67 | 55.0 | 4.30e-01 | 93.5% | 42.9% |
| 4uobA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.66 | 54.0 | 3.68e-01 | 100.0% | 23.0% |
| 2w9mA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.66 | 53.0 | 4.29e-01 | 100.0% | 58.8% |
| 3k50A03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.65 | 50.0 | 3.16e-01 | 100.0% | 15.7% |
| 2wwwC01 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 54.0 | 4.68e-01 | 100.0% | 80.8% |
| 1repC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 51.0 | 3.48e-01 | 96.8% | 25.2% |
| 2qbyA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 48.0 | 3.56e-01 | 100.0% | 34.0% |
| 4fxdA06 | 1.10.132.60 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain | 0.63 | 53.0 | 3.37e-01 | 96.8% | 21.3% |
| 3fmtE01 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.63 | 48.0 | 4.53e-01 | 93.5% | 70.7% |
| 4g0aA01 | 3.90.1400.10 | Alpha Beta › Alpha-Beta Complex › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain | 0.62 | 45.0 | 3.11e-01 | 96.8% | 24.3% |
| 3bzcA04 | 1.10.150.310 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tex RuvX-like domain-like | 0.62 | 52.0 | 3.46e-01 | 96.8% | 22.0% |
| 1cukA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.59 | 46.0 | 3.70e-01 | 100.0% | 43.4% |
| 2p67A01 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 49.0 | 4.15e-01 | 100.0% | 65.4% |
| 4bxoB02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.55 | 44.0 | 3.61e-01 | 100.0% | 40.0% |
| 4nfwF00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 46.0 | 2.99e-01 | 96.8% | 63.4% |
| 1bvsA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.52 | 42.0 | 3.46e-01 | 96.8% | 44.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3785271 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.74 | 57.0 | 3.55e-01 | 100.0% | 14.6% |
| 3591634 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 60.0 | 4.48e-01 | 100.0% | 41.2% |
| 3831782 | 109.4.1.1531 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF7812 | 0.71 | 58.0 | 3.39e-01 | 100.0% | 10.9% |
| 4074538 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.68 | 51.0 | 3.26e-01 | 96.8% | 19.5% |
| 3969249 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.67 | 55.0 | 3.47e-01 | 100.0% | 17.1% |
| 4871764 | 223.1.1.1 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PHY | 0.61 | 49.0 | 3.35e-01 | 96.8% | 40.0% |
| 134667 | 101.1.11.23 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › SeqA_N | 0.60 | 45.0 | 4.35e-01 | 90.3% | 71.8% |