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OL963731.1__USM11495.1__vBCbaSRXM_50__00050

Bact-Vir

OL963731.1__USM11495.1__vBCbaSRXM_50__00050

Identity

Accession:
OL963731 ↗
Kingdom:
phage

Quality

76.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Citromicrobium_phage_vB_CbaS-RXM

TaxID: 2909582

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-66
PDB
Domain cluster: representative
D2 high residues 73-157
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p2hA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 43.0 3.40e-01 72.9% 97.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 32.0 3.74e-01 92.9% 74.6%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 32.0 3.79e-01 91.8% 77.6%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 39.0 4.15e-01 100.0% 83.3%
1hc7A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.56 40.0 2.86e-01 75.3% 71.4%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 33.0 3.68e-01 92.9% 76.6%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 34.0 3.62e-01 92.9% 70.3%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 36.0 4.18e-01 100.0% 93.4%
1jvnA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 44.0 3.12e-01 94.1% 57.8%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 34.0 3.92e-01 100.0% 93.3%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 34.0 3.95e-01 100.0% 95.0%
3hulB01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.52 44.0 3.71e-01 100.0% 99.4%
4mx8C01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.51 41.0 3.29e-01 90.6% 74.6%
2qsdA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.50 32.0 3.51e-01 100.0% 80.6%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 38.0 3.81e-01 91.8% 79.5%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3810109 376.1.2.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT 0.63 46.0 4.90e-01 96.5% 88.0%
4021196 270.1.1.0 ↗ beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related 0.61 44.0 3.73e-01 97.6% 46.7%
3732571 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 39.0 4.53e-01 100.0% 95.0%
4989779 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.59 35.0 3.29e-01 81.2% 50.0%
5062591 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.58 40.0 2.72e-01 100.0% 18.8%
3970000 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 42.0 3.97e-01 100.0% 65.0%
3216019 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 40.0 4.52e-01 100.0% 95.4%
3994973 101.1.12.3 ↗ alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N 0.56 49.0 4.31e-01 98.8% 68.5%
3427504 4.1.1.150 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3123 0.54 39.0 4.20e-01 100.0% 92.9%
4215369 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.53 39.0 3.46e-01 77.6% 92.0%
3257612 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.53 47.0 3.63e-01 100.0% 52.3%
3418960 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.52 38.0 3.01e-01 80.0% 63.5%
5036729 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.51 38.0 3.36e-01 77.6% 89.2%
3421481 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.50 41.0 3.02e-01 95.3% 72.6%
3213899 1.1.5.73 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin, DUF316 0.50 41.0 3.04e-01 98.8% 98.9%