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OL963731.1__USM11539.1__vBCbaSRXM_94__00094
Bact-VirOL963731.1__USM11539.1__vBCbaSRXM_94__00094
Identity
- Accession:
- OL963731 ↗
- Kingdom:
- phage
Quality
64.5
mean pLDDT
Taxonomy
TaxID: 2909582
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-66
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5aj3Q00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 53.0 | 4.18e-01 | 95.7% | 70.6% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.64 | 47.0 | 3.41e-01 | 78.7% | 63.4% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.60 | 43.0 | 3.21e-01 | 78.7% | 28.7% |
| 3j7aV00 | 2.40.50.1000 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 44.0 | 3.29e-01 | 91.5% | 47.9% |
| 1edzA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 45.0 | 3.31e-01 | 100.0% | 51.9% |
| 2l66A00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.56 | 34.0 | 3.37e-01 | 78.7% | 50.9% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.56 | 39.0 | 3.00e-01 | 78.7% | 65.7% |
| 5hc2B00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 36.0 | 2.22e-01 | 74.5% | 9.4% |
| 6xw5A01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.55 | 43.0 | 3.04e-01 | 93.6% | 84.4% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 46.0 | 3.30e-01 | 100.0% | 83.6% |
| 4cbgD02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 36.0 | 2.64e-01 | 76.6% | 74.5% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.52 | 35.0 | 2.88e-01 | 72.3% | 56.9% |
| 4zn4A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 2.59e-01 | 100.0% | 30.1% |
| 3rhtA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 43.0 | 2.81e-01 | 100.0% | 46.8% |
| 2hv2A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 36.0 | 2.96e-01 | 76.6% | 37.9% |
| 1nnwB00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.51 | 37.0 | 2.47e-01 | 85.1% | 20.3% |
| 2gmhA03 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 36.0 | 2.92e-01 | 74.5% | 80.2% |
| 6zzmA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 38.0 | 2.61e-01 | 91.5% | 71.1% |
| 1fi8C00 | 2.60.40.550 | Mainly Beta › Sandwich › Immunoglobulin-like › Ecotin | 0.51 | 37.0 | 3.24e-01 | 83.0% | 50.0% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3472858 | 145.1.1.32 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 | 0.68 | 43.0 | 3.77e-01 | 74.5% | 39.7% |
| 4345008 | 3747.1.1.3 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bbr_C | 0.64 | 46.0 | 3.49e-01 | 78.7% | 44.3% |
| 5081210 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.63 | 48.0 | 3.02e-01 | 87.2% | 25.6% |
| 3416181 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 53.0 | 3.14e-01 | 100.0% | 35.1% |
| 2726885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 42.0 | 3.19e-01 | 97.9% | 30.1% |
| 3604100 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 49.0 | 3.36e-01 | 97.9% | 94.2% |
| 3475092 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.60 | 49.0 | 3.22e-01 | 93.6% | 36.3% |
| 3656807 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 40.0 | 3.32e-01 | 70.2% | 41.1% |
| 4003638 | 206.1.3.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH_synth_ATP | 0.59 | 51.0 | 3.31e-01 | 97.9% | 42.9% |
| 3371797 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.59 | 41.0 | 3.37e-01 | 70.2% | 43.3% |
| 3580278 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.59 | 40.0 | 3.04e-01 | 72.3% | 36.8% |
| 3675509 | 192.3.1.0 ↗ | alpha bundles › Long alpha-hairpin › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0.59 | 46.0 | 3.28e-01 | 87.2% | 48.3% |
| 3958829 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.58 | 39.0 | 2.63e-01 | 93.6% | 15.5% |
| 3261672 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.58 | 43.0 | 3.57e-01 | 83.0% | 44.4% |
| 3445812 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 47.0 | 3.46e-01 | 93.6% | 76.4% |
| 3804236 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 49.0 | 3.58e-01 | 97.9% | 74.3% |
| 3734626 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.57 | 37.0 | 2.49e-01 | 74.5% | 14.1% |
| 3343334 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.57 | 38.0 | 2.82e-01 | 70.2% | 33.8% |
| 2141918 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 40.0 | 2.79e-01 | 91.5% | 19.9% |
| 4030088 | 206.1.3.18 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › D123 | 0.57 | 48.0 | 3.05e-01 | 100.0% | 26.4% |
| 3702616 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 41.0 | 3.20e-01 | 83.0% | 45.6% |
| 3611332 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 43.0 | 2.62e-01 | 100.0% | 32.2% |
| 3447043 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 37.0 | 4.24e-01 | 72.3% | 85.7% |
| 3275992 | 859.1.1.0 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 | 0.54 | 36.0 | 2.50e-01 | 72.3% | 17.0% |
| 3743583 | 109.21.1.4 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Sec16_C,Sec16 | 0.54 | 39.0 | 2.34e-01 | 85.1% | 90.7% |
| 3494833 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 37.0 | 2.16e-01 | 72.3% | 22.9% |
| 4002040 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.54 | 39.0 | 2.60e-01 | 80.9% | 17.3% |
| 3660020 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 35.0 | 3.18e-01 | 70.2% | 50.7% |
| 3631256 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.53 | 44.0 | 2.67e-01 | 100.0% | 29.6% |
| 1841021 | 243.19.1.1 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › Gp34_2nd | 0.53 | 40.0 | 3.11e-01 | 87.2% | 46.1% |
| 4197190 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.52 | 37.0 | 3.42e-01 | 70.2% | 71.7% |
| 3742766 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 43.0 | 2.72e-01 | 100.0% | 36.7% |
| 3399222 | 70.3.1.2 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › zf-MYND | 0.52 | 41.0 | 2.55e-01 | 89.4% | 17.1% |
| 143109 | 2007.1.1.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase1_like | 0.52 | 43.0 | 2.81e-01 | 100.0% | 46.8% |
| 3242681 | 213.1.1.81 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF7596 | 0.50 | 40.0 | 2.79e-01 | 97.9% | 25.5% |