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OL964755.1__UIS24894.1__pAEv1818_10__00010

Bact-Vir

OL964755.1__UIS24894.1__pAEv1818_10__00010

Identity

Accession:
OL964755 ↗
Kingdom:
phage

Quality

86.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Yanchengvirus› Aeromonas_phage_pAEv1818

TaxID: 2908746

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-92
PDB
Domain cluster: rep: JN638751.1__AEO93420.1__G_160__00152__D110-195
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08400.17 best phage_tail_N 64.5 1.50e-17 100.0% 69.4%
D2 high residues 137-225
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.67 44.0 5.26e-01 74.2% 100.0%
6fmeA03 2.20.220.10 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › alpha-Amylases 0.67 41.0 4.93e-01 70.8% 90.3%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.66 44.0 4.05e-01 86.5% 52.6%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.65 44.0 3.47e-01 98.9% 35.7%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 48.0 3.78e-01 79.8% 44.4%
3pzfA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.63 48.0 3.78e-01 79.8% 97.2%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 47.0 3.94e-01 80.9% 49.7%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.62 40.0 4.04e-01 79.8% 65.2%
3dmcA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 45.0 3.91e-01 76.4% 89.6%
6f91A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 49.0 3.44e-01 91.0% 76.3%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.58 31.0 3.52e-01 76.4% 67.7%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.57 39.0 3.08e-01 98.9% 34.6%
2xsgB01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 47.0 3.26e-01 88.8% 68.8%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 44.0 4.02e-01 83.1% 96.6%
4bj8K00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.56 47.0 4.27e-01 92.1% 74.2%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 3.99e-01 92.1% 59.0%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 46.0 3.13e-01 96.6% 44.0%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 47.0 3.00e-01 100.0% 51.6%
1sr8A02 3.30.2110.10 Alpha Beta › 2-Layer Sandwich › CbiD-like › CbiD-like 0.52 43.0 3.65e-01 91.0% 81.7%
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 46.0 3.11e-01 100.0% 63.4%
2i1yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 42.0 2.98e-01 88.8% 39.4%
3g8zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 44.0 3.90e-01 93.3% 84.4%
5swiD01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 44.0 3.22e-01 94.4% 90.6%
1hn0A04 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.51 43.0 3.87e-01 91.0% 100.0%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.51 38.0 3.29e-01 82.0% 47.4%
1lshA04 2.20.80.10 Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex, chain A, domain 4 › Lipovitellin-phosvitin complex, chain A, domain 4 0.51 46.0 3.29e-01 97.8% 84.1%
1luiA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 37.0 3.55e-01 78.7% 86.1%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.51 45.0 3.86e-01 95.5% 71.9%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4379627 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.66 54.0 3.64e-01 87.6% 51.9%
4191031 5084.3.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.63 52.0 3.57e-01 89.9% 60.6%
5014277 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.63 43.0 4.41e-01 84.3% 74.1%
4977538 9.13.1.0 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.62 54.0 4.96e-01 94.4% 85.2%
3885876 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.62 55.0 3.92e-01 100.0% 65.1%
4018022 3385.1.1.0 ↗ beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 0.62 50.0 4.56e-01 87.6% 88.1%
3969155 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.61 51.0 4.25e-01 91.0% 61.9%
4976136 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.60 43.0 4.24e-01 86.5% 69.5%
5049570 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.59 46.0 3.41e-01 83.1% 84.3%
3222110 2484.1.1.162 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › F-box 0.59 41.0 3.37e-01 73.0% 41.3%
1569520 2003.1.5.151 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.59 45.0 3.27e-01 82.0% 75.3%
3282130 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.58 41.0 3.48e-01 71.9% 48.9%
3665649 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.58 40.0 3.79e-01 71.9% 66.1%
3273903 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.58 48.0 3.28e-01 94.4% 46.6%
3609745 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.58 40.0 3.59e-01 100.0% 51.2%
3520453 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 39.0 3.43e-01 73.0% 47.7%
5055108 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.57 49.0 3.35e-01 94.4% 31.8%
3928894 241.2.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.57 43.0 3.32e-01 82.0% 37.6%
4031020 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.56 49.0 3.28e-01 94.4% 45.8%
4977909 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.56 44.0 4.06e-01 86.5% 66.4%
3255874 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.56 49.0 3.74e-01 94.4% 53.8%
3587919 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.56 48.0 3.23e-01 94.4% 45.5%
4128100 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.56 48.0 3.22e-01 94.4% 46.5%
3644862 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 50.0 3.26e-01 100.0% 53.9%
3972133 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.54 41.0 3.08e-01 83.1% 80.4%
3870034 5.1.3.161 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_6 0.53 47.0 3.20e-01 100.0% 49.9%
3374847 5.1.3.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth 0.53 46.0 3.17e-01 97.8% 50.3%
3264623 4096.1.1.0 ↗ a+b two layers › NAP-like › NAP-like › NAP-like 0.53 46.0 3.59e-01 100.0% 44.1%
2605239 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.53 45.0 4.12e-01 94.4% 85.8%
3290421 2004.1.1.689 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15, AAA_21 0.52 45.0 3.04e-01 98.9% 33.8%
3906480 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 46.0 3.18e-01 100.0% 51.2%
3377988 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 47.0 4.50e-01 100.0% 90.0%
3274430 12.3.1.40 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N 0.50 46.0 3.41e-01 97.8% 86.2%
3934509 3369.1.1.0 ↗ beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 0.50 46.0 3.60e-01 100.0% 61.1%
5019409 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.50 44.0 3.06e-01 100.0% 40.6%
D3 high residues 239-360
PDB
Domain cluster: rep: MT701590.1__QPB09187.1__CPT_Miami_092__00092__D399-544
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25670.2 best Phage_tail_C_2 170.1 3.50e-50 100.0% 91.0%