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OL964756.1__UIS24968.1__pAEv1810_30__00030
Bact-VirOL964756.1__UIS24968.1__pAEv1810_30__00030
Identity
- Accession:
- OL964756 ↗
- Kingdom:
- phage
Quality
74.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Ferozepurvirus›
Aeromonas_phage_pAEv1810
TaxID: 2908744
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-64
Domain cluster:
rep: OP889247.1__WAX22170.1__AVP1_0060__00060__D14-51
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7bqiA01 | 1.20.58.900 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain | 0.87 | 44.0 | 3.05e-01 | 78.8% | 17.2% |
| 3spdA00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.79 | 39.0 | 2.58e-01 | 73.1% | 12.5% |
| 2xhsA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.69 | 46.0 | 2.99e-01 | 100.0% | 14.8% |
| 2fji101 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.66 | 47.0 | 3.08e-01 | 98.1% | 18.7% |
| 7qjnA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 43.0 | 2.65e-01 | 82.7% | 13.6% |
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.61 | 42.0 | 3.15e-01 | 73.1% | 39.8% |
| 2p1aB01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.60 | 47.0 | 3.36e-01 | 90.4% | 30.1% |
| 4r78A02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.59 | 40.0 | 2.77e-01 | 71.2% | 56.5% |
| 2eyqA07 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.58 | 45.0 | 3.42e-01 | 92.3% | 87.1% |
| 3pfmA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.58 | 49.0 | 3.20e-01 | 96.2% | 60.1% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 39.0 | 2.71e-01 | 73.1% | 99.5% |
| 5aigA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 40.0 | 3.09e-01 | 78.8% | 46.0% |
| 3dlsB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.55 | 39.0 | 2.70e-01 | 76.9% | 28.6% |
| 2ydjA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 39.0 | 2.72e-01 | 76.9% | 32.0% |
| 7z0sF01 | 3.30.70.3270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 40.0 | 2.88e-01 | 82.7% | 54.0% |
| 2nsfA01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.53 | 44.0 | 3.06e-01 | 90.4% | 52.8% |
| 4krdA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 39.0 | 2.67e-01 | 82.7% | 24.9% |
| 1guxB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 40.0 | 2.96e-01 | 86.5% | 56.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4018648 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.76 | 39.0 | 2.29e-01 | 71.2% | 6.9% |
| 3176868 | 129.1.1.102 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › PF30133 | 0.75 | 42.0 | 2.96e-01 | 98.1% | 17.5% |
| 3238272 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.73 | 44.0 | 2.68e-01 | 90.4% | 9.8% |
| 3167832 | 109.4.1.87 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec6 | 0.72 | 48.0 | 2.68e-01 | 96.2% | 5.4% |
| 3614292 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.67 | 51.0 | 3.52e-01 | 96.2% | 25.3% |
| 4024244 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.67 | 47.0 | 3.11e-01 | 73.1% | 68.6% |
| 3496957 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.67 | 45.0 | 2.57e-01 | 100.0% | 6.5% |
| 5011140 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.66 | 42.0 | 3.04e-01 | 73.1% | 23.4% |
| 4169661 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.61 | 42.0 | 2.91e-01 | 100.0% | 19.5% |
| 3690576 | 5001.1.1.32 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Solute_trans_a | 0.61 | 47.0 | 2.80e-01 | 88.5% | 12.6% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.60 | 52.0 | 4.00e-01 | 100.0% | 44.3% |
| 4030787 | 605.1.1.303 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Terminase_4 | 0.60 | 49.0 | 3.88e-01 | 88.5% | 58.0% |
| 3244252 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.59 | 52.0 | 3.20e-01 | 100.0% | 32.9% |
| 3788734 | 1117.1.1.1 ↗ | alpha arrays › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain › EPL1 | 0.58 | 40.0 | 2.63e-01 | 71.2% | 18.6% |
| 4251107 | 321.1.1.6 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Pup_ligase | 0.57 | 51.0 | 2.99e-01 | 100.0% | 24.4% |
| 3717247 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.57 | 51.0 | 3.33e-01 | 100.0% | 29.1% |
| 3508781 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 41.0 | 3.45e-01 | 76.9% | 63.3% |
| 5021423 | 304.139.1.3 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Cas_Cas7 | 0.56 | 39.0 | 2.52e-01 | 75.0% | 70.4% |
| 3249549 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.55 | 43.0 | 2.87e-01 | 90.4% | 60.0% |
| 3173752 | 2002.1.1.192 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase | 0.53 | 42.0 | 2.39e-01 | 94.2% | 7.5% |
| 3183367 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.52 | 43.0 | 2.80e-01 | 100.0% | 80.7% |
| 4437237 | 7579.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase | 0.52 | 37.0 | 2.16e-01 | 80.8% | 8.4% |
| 3789891 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.50 | 39.0 | 2.84e-01 | 86.5% | 78.1% |
D2
high
residues 96-173
Domain cluster:
rep: OP718284.1__WAW11406.1__vBAcePPAc_0029__00028__D117-189
D3
medium
residues 174-265_339-451
Domain cluster:
representative
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gq8A01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.80 | 76.0 | 5.69e-01 | 100.0% | 60.1% |
| 3grhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.80 | 76.0 | 5.94e-01 | 99.5% | 69.5% |
| 3zppA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.79 | 76.0 | 5.81e-01 | 100.0% | 74.6% |
| 1qjvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 74.0 | 6.11e-01 | 100.0% | 76.0% |
| 1rmgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 74.0 | 5.68e-01 | 100.0% | 51.2% |
| 1clwA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.78 | 73.0 | 5.27e-01 | 100.0% | 47.7% |
| 5olpA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 74.0 | 5.60e-01 | 99.5% | 63.4% |
| 3riqA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.77 | 73.0 | 5.25e-01 | 100.0% | 47.1% |
| 3vmvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 73.0 | 6.17e-01 | 100.0% | 78.7% |
| 3zscA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 73.0 | 6.06e-01 | 99.0% | 74.2% |
| 4hwvB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 73.0 | 5.38e-01 | 100.0% | 78.0% |
| 1vblA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 72.0 | 5.60e-01 | 100.0% | 77.6% |
| 4oj6C03 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 71.0 | 5.64e-01 | 100.0% | 81.4% |
| 1ee6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 65.0 | 6.68e-01 | 95.1% | 93.4% |
| 7dmkA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 71.0 | 6.16e-01 | 99.5% | 85.3% |
| 1dbgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 71.0 | 5.27e-01 | 100.0% | 61.5% |
| 5gkdA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 71.0 | 6.26e-01 | 99.5% | 86.7% |
| 1pxzA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 71.0 | 5.81e-01 | 100.0% | 74.0% |
| 3eqnA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 71.0 | 5.83e-01 | 100.0% | 73.7% |
| 1bheA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 71.0 | 5.64e-01 | 100.0% | 73.9% |
| 1x0cA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 71.0 | 5.65e-01 | 100.0% | 57.0% |
| 4nk6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 70.0 | 5.39e-01 | 100.0% | 86.6% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.74 | 36.0 | 5.24e-01 | 83.9% | 100.0% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 69.0 | 5.06e-01 | 100.0% | 55.2% |
| 8tmsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 68.0 | 6.06e-01 | 99.0% | 98.6% |
| 1gq8A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 69.0 | 5.82e-01 | 100.0% | 79.9% |
| 2bm5B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.72 | 54.0 | 5.73e-01 | 97.1% | 88.3% |
| 3b4nA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 65.0 | 6.28e-01 | 97.6% | 95.1% |
| 2w7zA00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.70 | 57.0 | 5.72e-01 | 98.0% | 84.1% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.70 | 60.0 | 6.30e-01 | 91.2% | 100.0% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 47.0 | 5.32e-01 | 89.3% | 89.2% |
| 5c1cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 63.0 | 5.53e-01 | 97.1% | 79.6% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 46.0 | 5.19e-01 | 92.2% | 87.3% |
| 3ak5D02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.67 | 63.0 | 4.25e-01 | 100.0% | 39.5% |
| 4i84A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.65 | 61.0 | 5.36e-01 | 100.0% | 90.9% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.64 | 60.0 | 5.22e-01 | 100.0% | 95.3% |
| 3p4gD00 | 2.160.20.160 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.63 | 59.0 | 5.08e-01 | 100.0% | 85.3% |
| 3lycA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 59.0 | 5.56e-01 | 100.0% | 93.8% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 47.0 | 5.25e-01 | 90.2% | 100.0% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.62 | 55.0 | 5.27e-01 | 94.1% | 96.2% |
| 3jx8A00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 58.0 | 5.42e-01 | 100.0% | 93.1% |
| 4r6gA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.61 | 54.0 | 4.17e-01 | 97.1% | 49.1% |
| 1ea0A04 | 2.160.20.60 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Glutamate synthase, alpha subunit, C-terminal domain | 0.60 | 56.0 | 5.06e-01 | 100.0% | 91.1% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 51.0 | 5.27e-01 | 91.7% | 99.5% |
| 2z63A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.58 | 52.0 | 3.77e-01 | 97.1% | 39.1% |
| 3wpcA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.55 | 51.0 | 3.45e-01 | 100.0% | 34.3% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944588 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.82 | 67.0 | 7.05e-01 | 100.0% | 93.5% |
| 4963682 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 62.0 | 6.94e-01 | 86.3% | 99.4% |
| 3254891 | 207.6.1.8 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Nucleoporin_FG | 0.80 | 49.0 | 5.99e-01 | 87.3% | 93.3% |
| 5034985 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.79 | 64.0 | 6.64e-01 | 96.1% | 90.5% |
| 3256108 | 207.2.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP | 0.78 | 75.0 | 6.70e-01 | 100.0% | 94.4% |
| 4981294 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.78 | 62.0 | 6.72e-01 | 100.0% | 96.0% |
| 5018356 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.78 | 74.0 | 6.59e-01 | 100.0% | 91.7% |
| 3708824 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.77 | 74.0 | 6.39e-01 | 100.0% | 77.3% |
| 3717417 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.77 | 73.0 | 6.86e-01 | 98.5% | 91.7% |
| 3621708 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.77 | 59.0 | 6.27e-01 | 100.0% | 89.9% |
| 4554798 | 207.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase | 0.76 | 66.0 | 6.53e-01 | 94.1% | 86.7% |
| 3708837 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.76 | 58.0 | 6.23e-01 | 100.0% | 91.4% |
| 3502757 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.76 | 72.0 | 5.53e-01 | 100.0% | 66.3% |
| 3259866 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.76 | 72.0 | 5.20e-01 | 100.0% | 58.7% |
| 3711297 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.76 | 72.0 | 5.91e-01 | 100.0% | 60.3% |
| 3245719 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.76 | 72.0 | 5.52e-01 | 100.0% | 59.8% |
| 3255127 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.75 | 71.0 | 5.97e-01 | 100.0% | 83.9% |
| 5043648 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.75 | 61.0 | 6.48e-01 | 94.6% | 95.0% |
| 3429156 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.75 | 71.0 | 5.91e-01 | 100.0% | 77.9% |
| 3751429 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.75 | 70.0 | 6.20e-01 | 97.6% | 96.4% |
| 3254326 | 207.2.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP | 0.75 | 71.0 | 5.93e-01 | 100.0% | 82.4% |
| 3591751 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.75 | 70.0 | 6.65e-01 | 98.0% | 91.5% |
| 2337273 | 207.2.1.29 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_5 | 0.75 | 71.0 | 5.84e-01 | 100.0% | 85.7% |
| 3256803 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.75 | 71.0 | 6.42e-01 | 100.0% | 92.5% |
| 3341233 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.74 | 69.0 | 6.32e-01 | 99.0% | 77.6% |
| 5033178 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.74 | 70.0 | 6.17e-01 | 99.0% | 75.1% |
| 4981379 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.74 | 70.0 | 6.82e-01 | 100.0% | 95.1% |
| 5033960 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.74 | 70.0 | 5.78e-01 | 100.0% | 61.8% |
| 5034984 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.74 | 70.0 | 6.38e-01 | 100.0% | 83.5% |
| 4969946 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.74 | 70.0 | 5.40e-01 | 100.0% | 52.5% |
| 3873508 | 207.2.1.70 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix | 0.73 | 70.0 | 5.10e-01 | 100.0% | 45.0% |
| 5055582 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.73 | 70.0 | 6.31e-01 | 100.0% | 81.1% |
| 4928776 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.73 | 69.0 | 5.79e-01 | 100.0% | 76.6% |
| 5027446 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.73 | 69.0 | 6.42e-01 | 100.0% | 94.3% |
| 3539089 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.72 | 69.0 | 6.39e-01 | 100.0% | 84.4% |
| 5058698 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.72 | 68.0 | 5.56e-01 | 100.0% | 57.5% |
| 5062382 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.72 | 69.0 | 6.42e-01 | 100.0% | 91.4% |
| 5060892 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.72 | 68.0 | 5.81e-01 | 100.0% | 65.1% |
| 3702151 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.71 | 66.0 | 5.80e-01 | 97.6% | 88.6% |
| 3921234 | 207.2.1.70 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix | 0.71 | 68.0 | 5.65e-01 | 100.0% | 74.2% |
| 4970433 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.71 | 67.0 | 5.83e-01 | 100.0% | 68.7% |
| 3336085 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.70 | 58.0 | 5.89e-01 | 100.0% | 88.2% |
| 4021507 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.70 | 61.0 | 5.97e-01 | 92.2% | 90.6% |
| 3560250 | 208.2.1.7 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Epiglycanin_TR | 0.70 | 45.0 | 5.31e-01 | 99.0% | 91.7% |
| 4011657 | 207.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase | 0.69 | 64.0 | 6.18e-01 | 97.6% | 90.0% |
| 3903674 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.68 | 51.0 | 4.91e-01 | 97.1% | 68.3% |
| 3838480 | 207.2.1.83 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › VacA2 | 0.68 | 64.0 | 4.71e-01 | 100.0% | 46.6% |
| 5009518 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.66 | 63.0 | 4.50e-01 | 100.0% | 38.6% |
| 4307386 | 207.6.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP | 0.65 | 49.0 | 5.17e-01 | 97.1% | 85.4% |
| 3567623 | 208.7.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Epiglycanin_TR | 0.64 | 46.0 | 5.13e-01 | 96.1% | 93.1% |
| 4976134 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.64 | 60.0 | 5.13e-01 | 100.0% | 79.7% |
| 4990150 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.63 | 58.0 | 4.65e-01 | 95.6% | 67.6% |
| 3937756 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.62 | 54.0 | 5.13e-01 | 100.0% | 79.1% |
| 5022823 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.62 | 57.0 | 4.96e-01 | 100.0% | 79.7% |
D4
medium
residues 266-338
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.72 | 53.0 | 5.40e-01 | 100.0% | 80.3% |
| 2wssA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.72 | 51.0 | 4.72e-01 | 100.0% | 59.1% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.71 | 52.0 | 4.91e-01 | 100.0% | 63.3% |
| 3prbA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.69 | 41.0 | 5.10e-01 | 78.1% | 100.0% |
| 2c3gA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 4.04e-01 | 100.0% | 62.2% |
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 38.0 | 4.20e-01 | 78.1% | 93.0% |
| 3p9dG03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.54 | 39.0 | 3.16e-01 | 78.1% | 97.4% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 46.0 | 4.34e-01 | 100.0% | 77.2% |
| 1kskA02 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.53 | 42.0 | 3.32e-01 | 100.0% | 38.9% |
| 1vioA03 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.53 | 42.0 | 4.09e-01 | 98.6% | 79.3% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 38.0 | 3.82e-01 | 78.1% | 89.2% |
| 1x9pA01 | 2.60.120.550 | Mainly Beta › Sandwich › Jelly Rolls › Penton protein; domain 1 | 0.51 | 40.0 | 3.25e-01 | 100.0% | 40.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4867073 | 2485.3.1.8 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › P22_CoatProtein | 0.70 | 63.0 | 5.46e-01 | 100.0% | 89.3% |
| 4849089 | 2485.3.1.8 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › P22_CoatProtein | 0.69 | 62.0 | 5.29e-01 | 100.0% | 92.3% |
| 1954233 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.68 | 63.0 | 5.81e-01 | 100.0% | 80.9% |
| 4014463 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 56.0 | 4.35e-01 | 100.0% | 84.7% |
| 3740006 | 1.1.7.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › D-ser_dehydrat | 0.59 | 46.0 | 3.78e-01 | 100.0% | 44.1% |
| 3740846 | 1.1.7.46 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B | 0.57 | 51.0 | 4.39e-01 | 100.0% | 80.9% |
| 4382401 | 1.1.7.100 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N | 0.57 | 50.0 | 4.83e-01 | 100.0% | 89.4% |
| 3735267 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 50.0 | 4.79e-01 | 100.0% | 90.6% |
| 4315579 | 1.1.8.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_CAF17_C | 0.55 | 49.0 | 4.19e-01 | 100.0% | 83.3% |
| 3723768 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 49.0 | 4.58e-01 | 100.0% | 82.2% |
| 4598968 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.55 | 48.0 | 4.08e-01 | 100.0% | 74.4% |
| 3388311 | 1.1.7.100 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N | 0.55 | 48.0 | 4.60e-01 | 100.0% | 88.2% |
| 4037377 | 1.1.8.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_CAF17_C | 0.54 | 47.0 | 4.09e-01 | 100.0% | 79.1% |
| 4448587 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.53 | 45.0 | 3.87e-01 | 100.0% | 57.6% |
| 3403550 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.52 | 35.0 | 3.26e-01 | 100.0% | 51.0% |
| 5031633 | 304.8.1.118 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › TruB_C_2 | 0.51 | 45.0 | 3.57e-01 | 98.6% | 49.3% |
| 3243014 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.51 | 31.0 | 3.24e-01 | 72.6% | 68.3% |
D5
medium
residues 688-796