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OL989991.1__UIS65554.1__Q76222_00039__00039

Bact-Vir

OL989991.1__UIS65554.1__Q76222_00039__00039

Identity

Accession:
OL989991 ↗
Kingdom:
phage

Quality

77.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Kanagawavirus› Enterobacter_phage_vB_EclM_Q7622

TaxID: 2908628

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-42
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gviA03 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.88 63.0 6.61e-01 89.7% 88.2%
1y02A01 1.10.720.140 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.88 64.0 5.07e-01 100.0% 39.7%
2d8yA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.86 67.0 5.47e-01 100.0% 47.2%
2d8xA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.85 67.0 5.50e-01 100.0% 48.6%
2dj7A00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.84 67.0 5.25e-01 100.0% 42.5%
7v8fB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.83 69.0 5.24e-01 100.0% 40.2%
2dloA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.83 66.0 5.20e-01 100.0% 43.2%
2xjyA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.79 63.0 5.31e-01 94.9% 54.0%
1zbdB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.77 67.0 4.70e-01 100.0% 32.5%
2co8A00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.77 59.0 4.68e-01 100.0% 41.5%
8eb0A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.76 60.0 4.76e-01 100.0% 41.9%
1z2qA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.76 65.0 5.13e-01 100.0% 51.2%
1wimA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.75 59.0 4.63e-01 100.0% 39.4%
3m7kA00 3.30.40.220 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.73 63.0 4.28e-01 100.0% 41.5%
2uzgA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.72 60.0 4.63e-01 100.0% 42.1%
7po9A01 3.40.1800.20 Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › 0.72 58.0 4.70e-01 100.0% 68.6%
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.71 60.0 5.48e-01 100.0% 70.9%
1vx7000 2.30.170.20 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 0.71 59.0 5.19e-01 100.0% 62.9%
1fxkC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 48.0 3.34e-01 74.4% 21.8%
2cjsC01 3.30.60.120 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.68 55.0 5.60e-01 97.4% 97.4%
1vq8U00 2.30.170.20 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 0.68 57.0 5.24e-01 100.0% 73.6%
2m13A00 4.10.640.40 Few Secondary Structures › Irregular › 30s Ribosomal Protein S18 › Cytoplasmic polyadenylation element-binding protein, ZZ domain 0.68 51.0 4.55e-01 100.0% 55.4%
4ccgY00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.64 52.0 4.54e-01 100.0% 61.2%
1a7iA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.59 45.0 4.19e-01 100.0% 88.3%
2drpA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.59 38.0 3.99e-01 76.9% 76.5%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3211971 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.90 75.0 7.44e-01 100.0% 90.0%
3692666 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.89 62.0 6.76e-01 84.6% 96.7%
3716795 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.86 69.0 7.14e-01 100.0% 100.0%
5033522 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.85 74.0 6.81e-01 100.0% 76.0%
3606495 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.84 72.0 6.03e-01 94.9% 57.8%
3401103 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.83 72.0 5.33e-01 100.0% 39.0%
4977157 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.83 71.0 6.81e-01 100.0% 84.4%
3594477 377.1.3.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.83 67.0 6.72e-01 100.0% 90.0%
3928741 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.82 68.0 5.30e-01 100.0% 43.5%
3515095 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.82 55.0 5.85e-01 82.1% 93.1%
3705738 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.82 70.0 6.08e-01 100.0% 63.3%
3745376 376.1.3.4 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_2 0.81 71.0 5.70e-01 100.0% 52.0%
3561116 376.1.3.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › ADD_ATRX 0.81 67.0 6.74e-01 94.9% 92.5%
3846283 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.80 68.0 6.31e-01 100.0% 76.0%
5065598 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.80 54.0 5.65e-01 79.5% 80.0%
3404271 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.80 61.0 5.17e-01 84.6% 50.8%
3566304 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.80 67.0 6.67e-01 100.0% 92.5%
5031996 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.80 67.0 6.00e-01 94.9% 69.1%
4068879 375.1.1.235 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › ADD_ATRX 0.80 66.0 6.63e-01 94.9% 92.5%
3372361 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.80 66.0 6.64e-01 94.9% 92.5%
3926338 376.1.1.94 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_IRF-2BP1_2 0.80 67.0 5.00e-01 100.0% 38.9%
3401084 377.1.1.18 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-AD 0.79 67.0 5.28e-01 100.0% 71.8%
3481685 376.1.3.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › RIM2a_ZnF 0.79 62.0 5.71e-01 87.2% 68.0%
4985634 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.77 68.0 5.78e-01 100.0% 88.9%
4015781 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.77 64.0 5.05e-01 97.4% 45.9%
3891438 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.76 61.0 4.72e-01 100.0% 38.9%
3567692 376.1.3.85 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › Znf_SCAND3 0.76 66.0 6.10e-01 100.0% 82.0%
3259913 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.75 59.0 4.91e-01 100.0% 48.0%
3519557 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.75 64.0 6.42e-01 97.4% 95.0%
5068785 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.75 59.0 5.92e-01 94.9% 87.5%
3534273 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.74 59.0 5.93e-01 92.3% 90.0%
3394910 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 58.0 6.02e-01 89.7% 97.1%
5059659 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.74 62.0 6.17e-01 97.4% 95.0%
3233860 101.1.1.488 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Lin-15B 0.73 60.0 4.30e-01 100.0% 52.8%
3600693 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.73 61.0 4.50e-01 100.0% 37.3%
3624345 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.73 63.0 6.33e-01 100.0% 97.5%
3611690 376.1.1.37 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C 0.72 61.0 4.93e-01 100.0% 48.8%
3686834 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.72 61.0 5.01e-01 100.0% 52.0%
3718306 376.1.1.37 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C 0.72 61.0 4.29e-01 100.0% 31.5%
3679252 376.1.3.24 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › NSD_PHD 0.72 58.0 5.20e-01 100.0% 63.3%
3897345 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.71 56.0 5.61e-01 92.3% 90.0%
4990133 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.71 59.0 5.29e-01 97.4% 67.3%
5010149 377.1.1.131 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TRASH_HVO_1752_C 0.70 59.0 5.87e-01 100.0% 95.0%
3301048 376.1.1.19 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv 0.70 57.0 5.76e-01 100.0% 95.0%
4025931 377.1.1.6 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e 0.70 58.0 4.13e-01 100.0% 30.0%
3224881 377.1.1.6 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e 0.70 60.0 4.13e-01 100.0% 28.9%
4023822 377.1.1.6 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e 0.69 58.0 3.98e-01 100.0% 26.0%
3731209 377.1.1.6 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e 0.69 59.0 4.42e-01 100.0% 39.0%
3680502 377.1.1.6 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e 0.69 59.0 4.05e-01 100.0% 27.9%
3336254 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.69 57.0 5.52e-01 100.0% 86.7%
3411509 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.68 54.0 5.24e-01 92.3% 80.0%
4942722 377.1.1.6 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e 0.68 58.0 4.65e-01 100.0% 48.8%
4932487 377.1.1.6 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e 0.68 57.0 4.83e-01 100.0% 55.7%
3497361 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.68 57.0 5.35e-01 100.0% 78.0%
3254667 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.68 53.0 5.47e-01 89.7% 100.0%
3552232 377.1.1.6 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e 0.68 56.0 3.92e-01 100.0% 27.3%
3397474 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.67 53.0 5.32e-01 100.0% 92.5%
3260880 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.66 51.0 5.29e-01 89.7% 100.0%
3845445 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.66 56.0 5.41e-01 100.0% 86.7%
3297352 376.1.3.24 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › NSD_PHD 0.66 53.0 5.02e-01 97.4% 76.0%
3503103 376.1.1.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › FANCL_C 0.66 54.0 4.52e-01 100.0% 53.3%
3532171 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.65 55.0 5.35e-01 100.0% 86.7%
3461850 150.1.1.88 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PHD_Oberon 0.65 51.0 3.52e-01 100.0% 34.5%
4979944 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.65 53.0 5.29e-01 94.9% 92.5%
5071141 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.63 52.0 5.03e-01 100.0% 88.9%
3648747 376.1.3.62 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_Oberon 0.62 48.0 4.09e-01 100.0% 51.2%
5031930 375.8.1.0 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta 0.62 51.0 5.10e-01 100.0% 100.0%
3907975 377.1.1.50 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › ZMYM4 0.61 51.0 4.94e-01 100.0% 86.7%
3230733 376.1.2.24 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › RH_dom 0.61 48.0 4.37e-01 97.4% 66.7%
3409760 376.1.1.19 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv 0.60 49.0 4.36e-01 97.4% 66.7%
4562058 377.1.1.31 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YHS 0.58 47.0 4.60e-01 100.0% 86.7%