←Back to structures

OL989991.1__UIS65650.1__Q76222_00135__00135

Bact-Vir

OL989991.1__UIS65650.1__Q76222_00135__00135

Identity

Accession:
OL989991 ↗
Kingdom:
phage

Quality

70.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Kanagawavirus› Enterobacter_phage_vB_EclM_Q7622

TaxID: 2908628

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-105
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jadA00 1.20.1230.10 Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain 0.84 77.0 5.61e-01 100.0% 38.8%
4ke2A00 6.10.140.1860 Special › Helix non-globular › Helix Hairpins › 0.82 75.0 5.83e-01 100.0% 66.3%
3udcA01 1.10.287.1260 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.82 56.0 5.24e-01 73.7% 58.3%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 44.0 4.29e-01 93.7% 52.0%
3nkzA00 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.78 52.0 5.20e-01 71.6% 67.0%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.77 54.0 5.76e-01 87.4% 82.9%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 52.0 5.72e-01 71.6% 88.5%
1qvrC04 6.10.140.130 Special › Helix non-globular › Helix Hairpins › 0.75 57.0 5.40e-01 92.6% 67.3%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 66.0 5.51e-01 96.8% 84.3%
4wpeA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.74 67.0 4.75e-01 100.0% 82.9%
3g80A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.73 49.0 5.48e-01 73.7% 89.0%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.70 48.0 5.24e-01 70.5% 84.8%
6xj1A01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 59.0 4.39e-01 95.8% 91.4%
4fzsA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 56.0 4.32e-01 88.4% 44.0%
2r9iA00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.68 46.0 5.24e-01 76.8% 93.0%
2kp8A00 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.68 48.0 5.41e-01 73.7% 98.6%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.68 48.0 4.73e-01 74.7% 68.6%
2v0oB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.67 61.0 4.40e-01 100.0% 77.9%
2d1lA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.67 55.0 4.03e-01 91.6% 33.7%
3syvA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.67 60.0 4.41e-01 98.9% 86.5%
4wpcA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.67 60.0 4.25e-01 100.0% 33.2%
4nqiD00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.66 58.0 4.43e-01 100.0% 81.9%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.66 44.0 4.39e-01 75.8% 65.7%
1aj3A00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 44.0 4.43e-01 78.9% 67.3%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.65 47.0 5.11e-01 87.4% 90.0%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.65 55.0 5.05e-01 93.7% 80.0%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 49.0 5.31e-01 83.2% 96.2%
5y06A01 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 58.0 4.32e-01 96.8% 65.1%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 59.0 4.36e-01 100.0% 41.1%
1avoB00 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.64 51.0 4.56e-01 88.4% 85.0%
1ykhA00 6.10.140.200 Special › Helix non-globular › Helix Hairpins › 0.63 50.0 5.00e-01 88.4% 85.3%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 35.0 3.42e-01 90.5% 50.0%
3fb2A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 40.0 3.91e-01 77.9% 61.0%
2wyhB04 1.20.1270.50 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain 0.59 42.0 4.11e-01 76.8% 68.3%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.59 42.0 4.64e-01 73.7% 93.3%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 42.0 4.05e-01 77.9% 66.3%
4errB00 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 41.0 4.30e-01 76.8% 88.0%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3598977 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.85 63.0 6.67e-01 77.9% 85.9%
3404270 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.83 76.0 6.83e-01 100.0% 73.1%
3713135 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.80 64.0 6.02e-01 84.2% 71.8%
4024467 3871.1.1.1 ↗ alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN 0.80 58.0 4.98e-01 77.9% 49.7%
4029478 604.7.1.0 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A 0.79 56.0 5.44e-01 77.9% 66.7%
3733682 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.78 70.0 5.09e-01 98.9% 71.0%
3437287 5086.1.1.199 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PF31016 0.77 71.0 5.74e-01 100.0% 57.1%
4942736 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.76 49.0 4.74e-01 82.1% 59.0%
3917938 4177.1.1.5 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 0.76 70.0 5.29e-01 100.0% 87.0%
3502968 3684.1.1.23 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › CA109-like 0.76 66.0 5.12e-01 96.8% 45.1%
3599499 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.75 65.0 5.53e-01 92.6% 63.3%
4981185 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.74 69.0 5.54e-01 100.0% 55.4%
3725506 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.74 50.0 4.73e-01 72.6% 59.1%
3393794 3922.1.1.211 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DRC7_C 0.74 52.0 4.59e-01 73.7% 51.1%
4324499 3755.1.1.3 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › SPAM 0.73 67.0 5.77e-01 100.0% 66.9%
3962893 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.72 58.0 5.83e-01 84.2% 84.2%
3450858 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.72 54.0 4.90e-01 80.0% 60.8%
4063163 3755.1.1.0 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.72 64.0 5.17e-01 96.8% 53.7%
3164951 5094.1.1.1 ↗ a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.72 65.0 5.33e-01 100.0% 74.1%
3386352 4207.1.1.104 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Bac_export_2 0.72 58.0 5.50e-01 87.4% 74.5%
3839497 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.71 50.0 5.27e-01 72.6% 83.5%
3745112 3755.3.1.298 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › ING 0.70 59.0 5.50e-01 92.6% 72.5%
3894262 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.70 64.0 4.44e-01 100.0% 74.4%
3611632 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.70 50.0 4.91e-01 75.8% 70.0%
4297121 3755.3.1.46 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › She9_MDM33 0.70 61.0 4.70e-01 97.9% 77.3%
5042955 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.70 65.0 3.90e-01 100.0% 17.1%
4862474 3291.1.1.4 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 0.69 59.0 5.14e-01 95.8% 62.0%
3941012 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.69 64.0 4.17e-01 100.0% 42.1%
3214020 174.1.1.40 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF5373 0.69 53.0 4.58e-01 80.0% 54.3%
3746558 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.69 55.0 4.23e-01 85.3% 58.1%
3605285 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.69 43.0 3.71e-01 83.2% 41.4%
3782160 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.69 61.0 4.31e-01 100.0% 53.4%
3564399 3755.3.1.282 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Tmemb_cc2 0.68 52.0 4.84e-01 85.3% 65.2%
3244591 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.68 61.0 5.06e-01 96.8% 94.4%
4276314 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.68 63.0 4.75e-01 100.0% 43.6%
3273611 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.68 62.0 4.40e-01 100.0% 35.3%
5002671 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.67 62.0 5.18e-01 100.0% 61.9%
3194153 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.67 45.0 4.54e-01 72.6% 68.4%
3737781 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.67 45.0 4.39e-01 73.7% 62.9%
3607135 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.66 57.0 5.12e-01 96.8% 77.0%
4025 150.5.1.1 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 0.66 44.0 4.39e-01 75.8% 65.7%
4022294 1025.1.1.0 ↗ alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain 0.66 46.0 4.43e-01 71.6% 64.8%
3512620 3755.4.1.1 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PI3K_P85_iSH2 0.64 58.0 4.84e-01 100.0% 59.4%
3239791 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 55.0 4.42e-01 93.7% 51.7%
3913300 3755.3.1.303 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th 0.63 54.0 4.72e-01 96.8% 60.7%
3170876 192.7.1.30 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › CUX1_N 0.62 52.0 4.89e-01 94.7% 75.7%
3501427 3755.3.1.295 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › WWC1 0.62 56.0 4.83e-01 98.9% 86.9%
4538431 109.4.1.81 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF-3c_N 0.55 41.0 2.75e-01 77.9% 42.9%