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OM046629.1__UNA06022.1__vBYenM3014_027__00027

Bact-Vir

OM046629.1__UNA06022.1__vBYenM3014_027__00027

Identity

Accession:
OM046629 ↗
Kingdom:
phage

Quality

96.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Yersinia_phage_vB_YenM_30.14

TaxID: 2918925

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-113
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.82 60.0 6.73e-01 99.1% 95.5%
3bpqD00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.81 59.0 6.66e-01 99.1% 97.7%
2kheA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.79 59.0 6.53e-01 100.0% 96.6%
7bwfA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.77 57.0 6.35e-01 99.1% 97.7%
6n90A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.77 58.0 6.47e-01 100.0% 100.0%
2kc8A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.76 54.0 5.87e-01 99.1% 87.4%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.68 44.0 5.17e-01 98.2% 96.1%
2l09A01 1.10.8.550 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B 0.60 28.0 3.89e-01 96.4% 94.2%
3bc8A01 1.10.10.2160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.59 23.0 2.88e-01 78.6% 54.3%
1yezA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 29.0 3.53e-01 81.2% 88.2%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3965666 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.98 93.0 9.41e-01 98.2% 99.1%
5030204 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.87 55.0 6.66e-01 95.5% 96.0%
4966983 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.87 59.0 6.96e-01 96.4% 97.5%
4937857 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.86 58.0 6.85e-01 99.1% 96.2%
5071213 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.86 58.0 6.85e-01 97.3% 96.2%
4941220 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.85 57.0 6.76e-01 99.1% 96.2%
3166135 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.85 60.0 6.50e-01 100.0% 85.3%
5031617 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.85 58.0 6.78e-01 95.5% 97.5%
5063859 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.85 57.0 6.68e-01 97.3% 96.2%
4928181 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.84 58.0 6.64e-01 100.0% 92.9%
5014619 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.84 57.0 6.61e-01 99.1% 96.2%
3602698 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.84 60.0 6.80e-01 99.1% 96.5%
5018712 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.83 62.0 6.83e-01 100.0% 95.6%
4966797 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.82 57.0 6.51e-01 98.2% 94.1%
4962176 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.82 56.0 6.61e-01 97.3% 98.8%
4937366 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.81 59.0 6.38e-01 100.0% 88.4%
4959351 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.81 55.0 6.39e-01 100.0% 96.2%
5032565 4312.1.1.10 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin 0.81 57.0 6.47e-01 99.1% 95.3%
4950220 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.81 61.0 6.76e-01 100.0% 96.7%
3278218 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.81 59.0 6.52e-01 95.5% 93.3%
5029836 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.80 54.0 6.34e-01 100.0% 97.5%
5007067 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.80 60.0 6.60e-01 99.1% 96.7%
4937019 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.79 60.0 6.60e-01 100.0% 96.7%
4937737 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.79 57.0 6.49e-01 98.2% 98.8%
5080833 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.79 60.0 6.23e-01 100.0% 84.8%
4948982 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.79 59.0 6.51e-01 100.0% 96.7%
4937283 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.79 60.0 6.46e-01 100.0% 94.7%
3948814 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.78 57.0 5.94e-01 100.0% 81.0%
3945861 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.78 58.0 6.47e-01 100.0% 96.7%
3944846 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.78 62.0 6.14e-01 100.0% 80.9%
4938029 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.77 59.0 6.33e-01 100.0% 91.8%
3942405 4312.1.1.5 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › RelE 0.77 52.0 5.58e-01 100.0% 81.1%
3278065 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.76 58.0 5.91e-01 100.0% 80.9%
3975793 4312.1.1.5 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › RelE 0.76 51.0 5.49e-01 100.0% 80.0%
4937915 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.76 57.0 6.06e-01 100.0% 88.9%
4937945 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.76 60.0 6.23e-01 100.0% 89.3%
2723206 4312.2.1.1 ↗ a+b two layers › RelE-like › YaeB-like › YaeB-like › TrmO_C 0.75 46.0 5.43e-01 96.4% 87.3%
4937462 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.75 59.0 6.36e-01 100.0% 96.8%
3588277 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.74 59.0 5.91e-01 100.0% 81.7%
3955817 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.71 55.0 5.88e-01 100.0% 92.9%
2523878 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.70 57.0 5.58e-01 100.0% 80.7%
4960121 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.69 59.0 6.09e-01 100.0% 97.1%
3369852 4312.2.1.0 ↗ a+b two layers › RelE-like › YaeB-like › YaeB-like 0.68 49.0 5.31e-01 98.2% 88.3%
5058357 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.67 58.0 5.98e-01 100.0% 98.1%
4159473 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 30.0 3.96e-01 97.3% 81.7%
3276404 4312.2.1.0 ↗ a+b two layers › RelE-like › YaeB-like › YaeB-like 0.64 45.0 4.94e-01 100.0% 89.9%
3820897 109.4.1.1682 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PHM7_cyt 0.53 27.0 3.26e-01 84.8% 74.3%
3834987 304.9.1.46 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PHM7_cyt 0.52 26.0 3.13e-01 84.8% 70.7%
5080350 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 37.0 2.64e-01 76.8% 36.1%