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OM046629.1__UNA06040.1__vBYenM3014_045__00045
Bact-VirOM046629.1__UNA06040.1__vBYenM3014_045__00045
Identity
- Accession:
- OM046629 ↗
- Kingdom:
- phage
Quality
80.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-39
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nw0A03 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.77 | 56.0 | 4.87e-01 | 76.9% | 62.1% |
| 4uf0A03 | 2.10.110.20 | Mainly Beta › Ribbon › Cysteine Rich Protein › | 0.73 | 54.0 | 4.69e-01 | 84.6% | 67.7% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.71 | 53.0 | 4.44e-01 | 82.1% | 59.1% |
| 4qf3A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.68 | 49.0 | 4.41e-01 | 79.5% | 75.4% |
| 6xi7B02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.68 | 47.0 | 4.73e-01 | 71.8% | 84.6% |
| 1y8fA00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.66 | 50.0 | 4.60e-01 | 82.1% | 78.4% |
| 2ecjA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 50.0 | 4.51e-01 | 92.3% | 69.0% |
| 4yztA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 46.0 | 2.67e-01 | 79.5% | 18.8% |
| 3purA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 44.0 | 3.73e-01 | 82.1% | 59.5% |
| 3abzA01 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.60 | 45.0 | 2.65e-01 | 84.6% | 80.8% |
| 3slkA01 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 42.0 | 2.74e-01 | 79.5% | 16.9% |
| 3b08E00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.56 | 42.0 | 3.83e-01 | 89.7% | 94.9% |
| 3d0cB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 38.0 | 2.34e-01 | 76.9% | 21.0% |
| 1wjpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.54 | 38.0 | 3.90e-01 | 79.5% | 96.8% |
| 4b28A01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.51 | 44.0 | 2.81e-01 | 100.0% | 22.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3207317 | 192.7.1.23 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › zf-C4pol | 0.73 | 52.0 | 3.84e-01 | 76.9% | 30.0% |
| 3500391 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.72 | 58.0 | 4.40e-01 | 92.3% | 64.2% |
| 3556596 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.69 | 60.0 | 4.57e-01 | 97.4% | 50.0% |
| 3559876 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.63 | 45.0 | 3.36e-01 | 76.9% | 67.0% |
| 4952748 | 377.1.1.127 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF2116 | 0.60 | 44.0 | 4.61e-01 | 79.5% | 91.4% |
| 3465422 | 4120.1.1.0 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP | 0.58 | 46.0 | 3.21e-01 | 87.2% | 91.7% |
| 5082770 | 225.2.1.1 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Uncharacterized protein DIP2311 middle domain › Uncharacterized protein DIP2311 middle domain › HATPase_c_4 | 0.57 | 43.0 | 2.80e-01 | 79.5% | 22.8% |
| 3481821 | 2003.1.1.38 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › THF_DHG_CYH_C | 0.56 | 47.0 | 3.05e-01 | 97.4% | 36.8% |
| 3993483 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.56 | 42.0 | 3.20e-01 | 84.6% | 61.9% |
| 3554204 | 109.4.1.2271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med16_C | 0.54 | 38.0 | 3.64e-01 | 79.5% | 94.0% |
| 3179250 | 4163.1.2.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 | 0.54 | 47.0 | 3.22e-01 | 100.0% | 55.0% |
| 3372390 | 904.1.1.5 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › PLATZ | 0.53 | 38.0 | 2.72e-01 | 79.5% | 21.5% |
| 3468948 | 904.1.1.5 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › PLATZ | 0.51 | 37.0 | 2.59e-01 | 82.1% | 22.6% |