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OM049504.1__UIS65464.1__X__00036
Bact-VirOM049504.1__UIS65464.1__X__00036
Identity
- Accession:
- OM049504 ↗
- Kingdom:
- phage
Quality
94.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-55
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.61 | 44.0 | 3.17e-01 | 77.4% | 57.3% |
| 2fblB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.61 | 46.0 | 3.40e-01 | 98.1% | 30.4% |
| 3qfgA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 49.0 | 3.70e-01 | 100.0% | 84.8% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 31.0 | 3.33e-01 | 75.5% | 62.8% |
| 2c9oB02 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.53 | 38.0 | 3.13e-01 | 98.1% | 38.1% |
| 4qmgC01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 37.0 | 2.70e-01 | 77.4% | 59.7% |
| 1cd9D01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.55e-01 | 98.1% | 91.6% |
| 1tyeA00 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.51 | 40.0 | 2.38e-01 | 90.6% | 14.6% |
| 4h3sA02 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.50 | 37.0 | 3.01e-01 | 100.0% | 38.3% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3825016 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.62 | 48.0 | 4.32e-01 | 100.0% | 60.0% |
| 3195557 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.62 | 47.0 | 2.91e-01 | 100.0% | 14.1% |
| 2469828 | 206.1.3.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_2 | 0.60 | 50.0 | 3.29e-01 | 96.2% | 36.8% |
| 3995199 | 1170.1.2.0 ↗ | beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) | 0.58 | 46.0 | 3.38e-01 | 98.1% | 45.7% |
| 4951495 | 375.1.1.299 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf | 0.57 | 33.0 | 3.56e-01 | 75.5% | 65.0% |
| 3577757 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.56 | 42.0 | 3.29e-01 | 98.1% | 36.0% |
| 3728982 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.55 | 38.0 | 2.86e-01 | 71.7% | 57.7% |
| 3617175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 48.0 | 4.78e-01 | 100.0% | 92.7% |
| 3551265 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.55 | 40.0 | 3.26e-01 | 96.2% | 39.1% |
| 4274013 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.55 | 43.0 | 3.24e-01 | 92.5% | 38.0% |
| 3588192 | 4325.1.1.7 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 | 0.54 | 39.0 | 4.02e-01 | 81.1% | 82.0% |
| 3546174 | 209.1.1.4 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Xlink | 0.54 | 42.0 | 3.53e-01 | 100.0% | 48.4% |
| 3509449 | 389.1.3.3 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › Ephrin_rec_like | 0.54 | 30.0 | 3.16e-01 | 100.0% | 56.0% |
| 3592571 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 41.0 | 3.56e-01 | 84.9% | 62.4% |
| 3790199 | 64.5.1.0 ↗ | beta meanders › WW domain-like › Connector region of RNA helicase HrpB › Connector region of RNA helicase HrpB | 0.54 | 43.0 | 4.25e-01 | 96.2% | 86.7% |
| 3240000 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 42.0 | 4.13e-01 | 92.5% | 83.3% |
| 3629138 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 44.0 | 4.25e-01 | 96.2% | 86.7% |
| 4965843 | 2.4.1.19 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › DUF7861 | 0.52 | 40.0 | 3.56e-01 | 96.2% | 67.0% |
| 2559825 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 41.0 | 4.02e-01 | 96.2% | 88.7% |
| 3588108 | 4325.1.1.7 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 | 0.51 | 36.0 | 3.74e-01 | 83.0% | 82.0% |
| 4963179 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.51 | 37.0 | 2.97e-01 | 83.0% | 62.5% |
| 3280328 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.50 | 40.0 | 2.89e-01 | 98.1% | 47.4% |