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OM049504.1__UIS65479.1__X__00051

Bact-Vir

OM049504.1__UIS65479.1__X__00051

Identity

Accession:
OM049504 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Acidovorax_phage_AP1

TaxID: 2908629

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-157
PDB
D2 medium residues 169-225_434-494
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2itbB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.56 42.0 3.60e-01 80.5% 89.4%
2pmrA00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.55 26.0 3.17e-01 79.7% 68.4%
5kbwB00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.52 41.0 3.70e-01 85.6% 95.3%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 33.0 3.47e-01 85.6% 71.0%
5tj5E00 1.20.120.610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase 0.51 35.0 3.36e-01 70.3% 89.1%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.51 31.0 3.26e-01 83.9% 66.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3931107 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.52 36.0 3.52e-01 89.0% 63.8%
4175967 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.50 28.0 3.15e-01 78.0% 70.6%
3495915 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.50 31.0 2.44e-01 84.7% 27.3%
D3 medium residues 226-254_376-433
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4f92B10 1.10.3380.10 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain 0.55 39.0 3.31e-01 85.1% 44.8%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3221654 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.55 39.0 3.22e-01 74.7% 95.8%
D4 medium residues 255-375
PDB
Domain cluster: rep: MT119766.1__QIN95344.1__PBR31_00033__00033__D293-410