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OM095401.1__UKL54194.1__vBYenM324_007__00007
Bact-VirOM095401.1__UKL54194.1__vBYenM324_007__00007
Identity
- Accession:
- OM095401 ↗
- Kingdom:
- phage
Quality
76.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Peduoviridae›
Tresduoquattuorvirus›
Yersinia_phage_vB_YenM_324
TaxID: 2914024
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-81
Domain cluster:
rep: OL348188.1__UGC97303.1__X__00046__D15-89
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v66A00 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.64 | 44.0 | 4.81e-01 | 83.5% | 86.2% |
| 4ybaA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 43.0 | 4.42e-01 | 72.2% | 96.1% |
| 1zbuB01 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.61 | 41.0 | 4.26e-01 | 78.5% | 73.0% |
| 3cl3A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.61 | 46.0 | 4.56e-01 | 81.0% | 100.0% |
| 4fvmA04 | 6.10.10.100 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › | 0.58 | 30.0 | 3.69e-01 | 72.2% | 82.6% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 44.0 | 4.73e-01 | 88.6% | 100.0% |
| 2i88A00 | 1.10.490.30 | Mainly Alpha › Orthogonal Bundle › Globin-like › Colicin | 0.57 | 39.0 | 3.08e-01 | 72.2% | 91.6% |
| 3bujA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.56 | 49.0 | 3.15e-01 | 97.5% | 74.6% |
| 1y7yA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.56 | 38.0 | 4.01e-01 | 70.9% | 84.1% |
| 2n80A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.55 | 42.0 | 4.04e-01 | 84.8% | 77.7% |
| 1rylA00 | 3.40.1760.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family | 0.54 | 39.0 | 3.05e-01 | 74.7% | 68.2% |
| 3eqvA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 43.0 | 3.39e-01 | 91.1% | 65.7% |
| 3wvoC02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.53 | 38.0 | 3.27e-01 | 77.2% | 68.5% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3975487 | 101.1.4.31 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF5347 | 0.73 | 65.0 | 6.04e-01 | 94.9% | 86.3% |
| 3668249 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.70 | 40.0 | 5.08e-01 | 73.4% | 100.0% |
| 3949869 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.65 | 49.0 | 5.13e-01 | 79.7% | 97.1% |
| 4121822 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.64 | 40.0 | 4.85e-01 | 72.2% | 100.0% |
| 4963278 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.59 | 42.0 | 4.70e-01 | 78.5% | 98.3% |
| 4364993 | 2004.1.1.6 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran,oligo_HPY | 0.59 | 50.0 | 2.99e-01 | 94.9% | 26.2% |
| 5082802 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.59 | 48.0 | 4.50e-01 | 89.9% | 73.0% |
| None | — | 0.59 | 46.0 | 4.84e-01 | 100.0% | 98.6% | |
| 4194686 | 2004.1.1.6 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran,oligo_HPY | 0.58 | 49.0 | 3.26e-01 | 94.9% | 58.8% |
| 3278243 | 101.1.4.10 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1870 | 0.58 | 41.0 | 3.62e-01 | 75.9% | 52.5% |
| 4320989 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.58 | 45.0 | 3.94e-01 | 84.8% | 70.0% |
| 4995533 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.57 | 49.0 | 3.21e-01 | 94.9% | 33.9% |
| 3705785 | 3050.1.1.30 ↗ | alpha bundles › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain › TMEM254 | 0.57 | 39.0 | 3.66e-01 | 77.2% | 57.9% |
| 4962155 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.57 | 48.0 | 2.83e-01 | 94.9% | 23.5% |
| 3280782 | 2004.1.1.6 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran,oligo_HPY | 0.57 | 48.0 | 2.92e-01 | 94.9% | 27.3% |
| 3712322 | 3050.1.1.0 ↗ | alpha bundles › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain | 0.57 | 39.0 | 3.18e-01 | 77.2% | 37.3% |
| None | — | 0.57 | 48.0 | 3.27e-01 | 94.9% | 52.7% | |
| 4027969 | 102.9.1.0 ↗ | alpha arrays › HhH/H2TH › Cdc45 CID domain › Cdc45 CID domain | 0.57 | 43.0 | 4.12e-01 | 83.5% | 82.1% |
| 3840028 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.57 | 47.0 | 3.36e-01 | 94.9% | 61.9% |
| 3588951 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.57 | 40.0 | 4.43e-01 | 74.7% | 100.0% |
| 5063032 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 48.0 | 3.21e-01 | 94.9% | 49.2% |
| 4378987 | 2004.1.1.6 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran,oligo_HPY | 0.56 | 47.0 | 3.12e-01 | 94.9% | 43.3% |
| 3285598 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.56 | 48.0 | 3.27e-01 | 93.7% | 38.8% |
| 3957480 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 47.0 | 3.29e-01 | 93.7% | 36.6% |
| 4943917 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 46.0 | 3.15e-01 | 94.9% | 50.3% |
| 3387113 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 48.0 | 3.50e-01 | 98.7% | 61.3% |
| 3943025 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 47.0 | 3.51e-01 | 98.7% | 63.1% |
| 5018892 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 46.0 | 2.81e-01 | 94.9% | 26.7% |
| 3976874 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 48.0 | 3.41e-01 | 98.7% | 58.1% |
| 3987571 | 2004.1.1.6 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran,oligo_HPY | 0.55 | 46.0 | 2.75e-01 | 94.9% | 25.2% |
| 4930318 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.55 | 43.0 | 3.75e-01 | 91.1% | 53.1% |
| 3953585 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.55 | 47.0 | 3.34e-01 | 93.7% | 41.3% |
| 3941557 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.55 | 46.0 | 3.30e-01 | 94.9% | 58.0% |
| 4966204 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.55 | 47.0 | 2.79e-01 | 98.7% | 23.5% |
| 3278576 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.55 | 47.0 | 3.47e-01 | 98.7% | 64.0% |
| 4961389 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.55 | 47.0 | 3.08e-01 | 94.9% | 40.3% |
| 4978748 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.55 | 46.0 | 3.09e-01 | 94.9% | 48.3% |
| 3192631 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.55 | 45.0 | 4.74e-01 | 88.6% | 100.0% |
| 3062945 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.55 | 38.0 | 3.97e-01 | 78.5% | 83.1% |
| 3165618 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.54 | 46.0 | 3.21e-01 | 94.9% | 55.8% |
| 3290038 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.54 | 45.0 | 3.24e-01 | 94.9% | 62.4% |
| 5053260 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.54 | 45.0 | 3.08e-01 | 94.9% | 51.4% |
| 4036297 | 2004.1.1.6 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran,oligo_HPY | 0.54 | 45.0 | 2.71e-01 | 94.9% | 23.6% |
| 3589274 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.52 | 44.0 | 3.38e-01 | 98.7% | 74.6% |
| 3734962 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 44.0 | 3.13e-01 | 91.1% | 42.5% |
| 3791250 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.51 | 40.0 | 3.27e-01 | 86.1% | 84.5% |
| 3276147 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.51 | 40.0 | 3.21e-01 | 88.6% | 52.0% |