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OM112210.1__UKL30024.1__X__00025
Bact-VirOM112210.1__UKL30024.1__X__00025
Identity
- Accession:
- OM112210 ↗
- Kingdom:
- phage
Quality
79.7
mean pLDDT
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-189
Domain cluster:
rep: SRR1747023_scaffold_5_prodigal-single.1__X__X__00220__D6-190
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 27.0 | 4.24e-01 | 79.5% | 77.8% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 25.0 | 3.87e-01 | 80.1% | 79.0% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.68 | 19.0 | 3.66e-01 | 82.1% | 100.0% |
| 1wibA00 | 3.30.1550.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain | 0.64 | 33.0 | 4.13e-01 | 84.6% | 82.6% |
| 2id0A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 27.0 | 3.69e-01 | 86.5% | 83.3% |
| 3e19B01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.58 | 22.0 | 3.15e-01 | 83.3% | 75.0% |
| 3cebA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.53 | 29.0 | 3.73e-01 | 84.6% | 95.3% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.53 | 23.0 | 2.88e-01 | 94.2% | 63.0% |
| 2rqlA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.51 | 22.0 | 2.71e-01 | 85.9% | 58.9% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927342 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.83 | 48.0 | 6.25e-01 | 83.3% | 100.0% |
| 5002173 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 46.0 | 5.90e-01 | 84.6% | 100.0% |
| 5021275 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 53.0 | 6.13e-01 | 83.3% | 100.0% |
| 3942656 | 2.1.1.45 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › gp32 | 0.66 | 60.0 | 5.52e-01 | 100.0% | 91.2% |
| 4935307 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.61 | 23.0 | 3.08e-01 | 84.6% | 62.5% |
| 2647290 | 225.1.1.6 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_2 | 0.60 | 32.0 | 4.30e-01 | 79.5% | 100.0% |
| 3493866 | 216.1.1.26 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › FmiP_Thoc5 | 0.59 | 25.0 | 3.03e-01 | 92.3% | 57.1% |
| 3879038 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.57 | 31.0 | 3.63e-01 | 84.0% | 74.5% |
| 3910671 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.54 | 34.0 | 3.41e-01 | 86.5% | 60.0% |
| 3646521 | 4.2.1.4 ↗ | beta barrels › SH3 › SAND › SAND › TDBD | 0.53 | 22.0 | 3.12e-01 | 81.4% | 78.7% |
| 5026424 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 29.0 | 3.59e-01 | 78.8% | 85.3% |
| 3856429 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.53 | 30.0 | 3.36e-01 | 85.3% | 70.0% |
| 3881118 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.53 | 27.0 | 3.47e-01 | 81.4% | 84.4% |
| 5062623 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.52 | 31.0 | 3.00e-01 | 90.4% | 49.2% |
| 5068234 | 259.1.1.0 ↗ | a+b two layers › Ribosomal protein L31e-like › Ribosomal protein L31e/gp120 outer domain › Ribosomal protein L31e/gp120 outer domain | 0.50 | 29.0 | 3.76e-01 | 81.4% | 100.0% |